make -j 16
Scanning dependencies of target copy_scripts
[  3%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_benchmark_utils.cu.o
[  3%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_helper_functions.cu.o
[  3%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_backprojector.cu.o
[  4%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/cuda_kernels/relion_gpu_util_generated_helper.cu.o
[  5%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_ml_optimiser.cu.o
[  6%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_projector_plan.cu.o
[  6%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_projector.cu.o
[  6%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_autopicker.cu.o
[  6%] Built target copy_scripts
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
CMake Error at relion_gpu_util_generated_cuda_backprojector.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/./relion_gpu_util_generated_cuda_backprojector.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:70: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_backprojector.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_backprojector.cu.o] Fehler 1
make[2]: *** Auf noch nicht beendete Prozesse wird gewartet …
CMake Error at relion_gpu_util_generated_cuda_benchmark_utils.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:84: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_benchmark_utils.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_benchmark_utils.cu.o] Fehler 1
CMake Error at relion_gpu_util_generated_cuda_projector.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/./relion_gpu_util_generated_cuda_projector.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:77: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_projector.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_projector.cu.o] Fehler 1
CMake Error at relion_gpu_util_generated_helper.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/cuda_kernels/./relion_gpu_util_generated_helper.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:112: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/cuda_kernels/relion_gpu_util_generated_helper.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/cuda_kernels/relion_gpu_util_generated_helper.cu.o] Fehler 1
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
CMake Error at relion_gpu_util_generated_cuda_projector_plan.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/./relion_gpu_util_generated_cuda_projector_plan.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:91: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_projector_plan.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_projector_plan.cu.o] Fehler 1
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
CMake Error at relion_gpu_util_generated_cuda_autopicker.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/./relion_gpu_util_generated_cuda_autopicker.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:98: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_autopicker.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_autopicker.cu.o] Fehler 1
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
CMake Error at relion_gpu_util_generated_cuda_helper_functions.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/./relion_gpu_util_generated_cuda_helper_functions.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:105: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_helper_functions.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_helper_functions.cu.o] Fehler 1
/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
CMake Error at relion_gpu_util_generated_cuda_ml_optimiser.cu.o.cmake:266 (message):
  Error generating file
  /home/eggert/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/./relion_gpu_util_generated_cuda_ml_optimiser.cu.o


src/apps/CMakeFiles/relion_gpu_util.dir/build.make:63: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_ml_optimiser.cu.o“ scheiterte
make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/gpu_utils/relion_gpu_util_generated_cuda_ml_optimiser.cu.o] Fehler 1
CMakeFiles/Makefile2:614: die Regel für Ziel „src/apps/CMakeFiles/relion_gpu_util.dir/all“ scheiterte
make[1]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/all] Fehler 2
Makefile:138: die Regel für Ziel „all“ scheiterte
make: *** [all] Fehler 2