diff --git a/analyses/interaction-plots/01-create-interaction-plots.sh b/analyses/interaction-plots/01-create-interaction-plots.sh index e4abb5979e..707c9d089a 100644 --- a/analyses/interaction-plots/01-create-interaction-plots.sh +++ b/analyses/interaction-plots/01-create-interaction-plots.sh @@ -1,6 +1,6 @@ #!/bin/bash -# JA Shapiro for CCDL 2019 +# JA Shapiro for CCDL 2019-2020 # # Runs scripts/01-process_mutations.R with some default settings. # Takes one enviroment variable, `OPENPBTA_ALL`, which if 0 runs only @@ -49,6 +49,14 @@ if [ "$ALL" -gt "0" ]; then fi +# Get FLAG file and add header +# include top 50 frequently mutated +exclude_file=FLAGS.tsv +echo gene$'\t'count > $exclude_file +head -n 50 <(curl -s https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5706417/bin/12920_2017_309_MOESM3_ESM.txt)\ + >> $exclude_file + + # make output directories if they don't exist mkdir -p $results_dir mkdir -p $plot_dir @@ -67,6 +75,7 @@ Rscript ${script_dir}/02-process_mutations.R \ --maf ${maf} \ --metadata ${metadata} \ --specimen_list ${temp_dir}/ALL.tsv \ + --exclude_genes $exclude_file \ --vaf 0.05 \ --min_mutated 5 \ --max_genes 50 \ diff --git a/analyses/interaction-plots/FLAGS.tsv b/analyses/interaction-plots/FLAGS.tsv new file mode 100644 index 0000000000..30172859dc --- /dev/null +++ b/analyses/interaction-plots/FLAGS.tsv @@ -0,0 +1,51 @@ +gene count +TTN 2659 +MUC16 1222 +OBSCN 825 +AHNAK2 809 +SYNE1 686 +FLG 622 +MUC5B 552 +DNAH17 550 +PLEC 543 +DST 541 +SYNE2 537 +NEB 531 +HSPG2 515 +LAMA5 505 +AHNAK 493 +HMCN1 484 +USH2A 468 +DNAH11 445 +MACF1 440 +MUC17 435 +DNAH5 430 +GPR98 420 +FAT1 412 +PKD1 402 +MDN1 397 +RNF213 396 +RYR1 393 +DNAH2 389 +DNAH3 386 +DNAH8 383 +DNAH1 381 +DNAH9 379 +ABCA13 375 +APOB 372 +SRRM2 371 +CUBN 363 +SPTBN5 357 +PKHD1 353 +LRP2 352 +FBN3 350 +CDH23 349 +DNAH10 349 +FAT4 348 +RYR3 347 +PKHD1L1 345 +FAT2 344 +CSMD1 341 +PCNT 341 +COL6A3 336 +FRAS1 332 diff --git a/analyses/interaction-plots/README.md b/analyses/interaction-plots/README.md index f8271616a4..0499ec9dae 100644 --- a/analyses/interaction-plots/README.md +++ b/analyses/interaction-plots/README.md @@ -3,15 +3,19 @@ The scripts in this directory create a plot to display co-occurence and mutual exclusivity of mutations across tumors. Currently this is done across all tumor types, with all available individuals for which whole genome sequences are available for at least one tumor. + Importantly, only a single sequencing sample from each individual is used. -The analyses and plots created include information from the top 50 most mutated genes. +The analyses and plots created include information from the top 50 most mutated genes, with genes that are commonly mutated removed. +The commonly mutated genes are derived from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4267152/, specifically the top 50 genes from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5706417/bin/12920_2017_309_MOESM3_ESM.txt + +The main script creates plots for the full data set, as well as for groups of specific tumor types. +In the case of the full data set, a bar plot is also produced that summarizes which tumor types are mutated for each of the most common genes, as well as a publication-ready figure that combines the co-occurence plot and the bar plot. -Future analyses will include creating plots by tumor type, and for specific lists of genes of interest. ### Example plot -![Co-occurence Plot](plots/lancet_top50.png) +![Co-occurence Plot](plots/consensus_top50.png) ## Usage diff --git a/analyses/interaction-plots/plots/combined_top50.png b/analyses/interaction-plots/plots/combined_top50.png index 3da40d5426..cb9d18b489 100644 Binary files a/analyses/interaction-plots/plots/combined_top50.png and b/analyses/interaction-plots/plots/combined_top50.png differ diff --git a/analyses/interaction-plots/plots/cooccur_top50.ALL.png b/analyses/interaction-plots/plots/cooccur_top50.ALL.png index bd6f55c90b..7b4eb03a34 100644 Binary files a/analyses/interaction-plots/plots/cooccur_top50.ALL.png and b/analyses/interaction-plots/plots/cooccur_top50.ALL.png differ diff --git a/analyses/interaction-plots/plots/gene_disease_top50.png b/analyses/interaction-plots/plots/gene_disease_top50.png index ee5dcc2cae..9b043b3624 100644 Binary files a/analyses/interaction-plots/plots/gene_disease_top50.png and b/analyses/interaction-plots/plots/gene_disease_top50.png differ diff --git a/analyses/interaction-plots/results/cooccur_top50.ALL.tsv b/analyses/interaction-plots/results/cooccur_top50.ALL.tsv index 8092a4e36b..97aaf8b8eb 100644 --- a/analyses/interaction-plots/results/cooccur_top50.ALL.tsv +++ b/analyses/interaction-plots/results/cooccur_top50.ALL.tsv @@ -1,1226 +1,1226 @@ gene1 gene2 mut11 mut10 mut01 mut00 odds_ratio cooccur_sign p q cooccur_score -TP53 BRAF 2 53 48 573 0.45047169811320753 -1 0.4176311017650935 0.49477572501183703 -0.379207166083411 -TP53 H3F3A 25 30 15 606 33.666666666666664 1 2.7082938278006235e-20 3.317659939055764e-17 19.567304220020134 -TP53 CTNNB1 5 50 30 591 1.97 1 0.1938131760220379 0.24446641045435072 0.7126167015930392 -TP53 NF1 10 45 15 606 8.977777777777778 1 7.152907219309177e-6 3.666239055922068e-5 5.145517408172874 -TP53 TTN 8 47 15 606 6.876595744680851 1 2.1771006170044163e-4 5.442751542511041e-4 3.6621214991169087 -TP53 ATRX 14 41 9 612 23.21951219512195 1 4.981429985634932e-11 1.0986073373891422e-8 10.302645969343944 -TP53 FGFR1 3 52 13 608 2.698224852071006 1 0.13396066118180572 0.176264027870797 0.8730227176049901 -TP53 NF2 1 54 15 606 0.7481481481481481 -1 1 1 0 -TP53 MUC16 6 49 9 612 8.326530612244898 1 6.253028982009547e-4 0.0012682053812850488 3.2039095584139017 -TP53 PIK3CA 4 51 11 610 4.349376114081997 1 0.027260412833540307 0.03812101109713114 1.5644675714664629 -TP53 KMT2D 5 50 9 612 6.8 1 0.003380151105008735 0.0062172449003539045 2.4710638847505573 -TP53 DNAH5 6 49 8 613 9.38265306122449 1 4.002336002591445e-4 8.6015115845167e-4 3.397686454443956 -TP53 BCOR 1 54 13 608 0.8660968660968661 -1 1 1 0 -TP53 RYR1 7 48 5 616 17.966666666666665 1 9.36575861714897e-6 4.446920273646314e-5 5.028457039442165 -TP53 SMARCA4 4 51 8 613 6.009803921568627 1 0.011894201118578996 0.01846750252046135 1.924664722306339 -TP53 KMT2C 4 51 8 613 6.009803921568627 1 0.011894201118578996 0.01846750252046135 1.924664722306339 -TP53 OBSCN 6 49 5 616 15.085714285714285 1 7.47585376845237e-5 2.416337959460199e-4 4.126339202233726 -TP53 ABCA13 4 51 7 614 6.879551820728292 1 0.008435802336557793 0.01359718139774118 2.073873604981383 -TP53 SETD2 5 50 6 615 10.25 1 9.444824992806076e-4 0.0018452808000298953 3.024806084895432 -TP53 PDGFRA 5 50 6 615 10.25 1 9.444824992806076e-4 0.0018452808000298953 3.024806084895432 -TP53 PTPN11 4 51 7 614 6.879551820728292 1 0.008435802336557793 0.01359718139774118 2.073873604981383 -TP53 DDX3X 4 51 7 614 6.879551820728292 1 0.008435802336557793 0.01359718139774118 2.073873604981383 -TP53 RYR2 6 49 4 617 18.887755102040817 1 3.6252459101462214e-5 1.353940926807659e-4 4.440662528735115 -TP53 ATM 5 50 5 616 12.32 1 5.491534258278418e-4 0.0011287129977166212 3.2603063027602532 -TP53 DNAH14 6 49 4 617 18.887755102040817 1 3.6252459101462214e-5 1.353940926807659e-4 4.440662528735115 -TP53 EGFR 6 49 4 617 18.887755102040817 1 3.6252459101462214e-5 1.353940926807659e-4 4.440662528735115 -TP53 LRP1B 4 51 6 615 8.03921568627451 1 0.005711686032093352 0.009924560835906888 2.2432356734792465 -TP53 PTEN 5 50 5 616 12.32 1 5.491534258278418e-4 0.0011287129977166212 3.2603063027602532 -TP53 STAG2 2 53 8 613 2.891509433962264 1 0.19217378987735476 0.242944161609659 0.716305845012133 -TP53 PPM1D 2 53 8 613 2.891509433962264 1 0.19217378987735476 0.242944161609659 0.716305845012133 -TP53 NEB 5 50 4 617 15.425 1 2.92702942464652e-4 6.702076719985022e-4 3.533572911697611 -TP53 SYNE1 5 50 4 617 15.425 1 2.92702942464652e-4 6.702076719985022e-4 3.533572911697611 -TP53 FSIP2 4 51 5 616 9.662745098039215 1 0.0036466729895871515 0.006608246171958965 2.4381031797038513 -TP53 DNAH8 6 49 3 618 25.224489795918366 1 1.5470410206552068e-5 6.490154966789823e-5 4.810498170587633 -TP53 FBN2 4 51 5 616 9.662745098039215 1 0.0036466729895871515 0.006608246171958965 2.4381031797038513 -TP53 APOB 6 49 3 618 25.224489795918366 1 1.5470410206552068e-5 6.490154966789823e-5 4.810498170587633 -TP53 IDH1 4 51 5 616 9.662745098039215 1 0.0036466729895871515 0.006608246171958965 2.4381031797038513 -TP53 KDM6A 2 53 7 614 3.3099730458221024 1 0.16185929779589212 0.20871330505259772 0.7908623480657374 -TP53 KRAS 0 55 9 612 0 -1 1 1 0 -TP53 PLEC 5 50 3 618 20.6 1 1.386848689879305e-4 3.812676855490736e-4 3.857970919413458 -TP53 DNAH17 4 51 4 617 12.098039215686274 1 0.002156019635310487 0.004038415983570866 2.6663472882588777 -TP53 FAT1 3 52 5 616 7.107692307692307 1 0.021305181955633835 0.03034749755308308 1.671514752381609 -TP53 CCDC168 4 51 4 617 12.098039215686274 1 0.002156019635310487 0.004038415983570866 2.6663472882588777 -TP53 DNAH3 5 50 3 618 20.6 1 1.386848689879305e-4 3.812676855490736e-4 3.857970919413458 -TP53 KIAA1549 4 51 4 617 12.098039215686274 1 0.002156019635310487 0.004038415983570866 2.6663472882588777 -TP53 PCLO 5 50 3 618 20.6 1 1.386848689879305e-4 3.812676855490736e-4 3.857970919413458 -TP53 MAGEL2 6 49 2 619 37.89795918367347 1 5.501602861780452e-6 3.0221809442515935e-5 5.259510762758092 -TP53 PHLPP1 3 52 5 616 7.107692307692307 1 0.021305181955633835 0.03034749755308308 1.671514752381609 -TP53 DNAH11 5 50 3 618 20.6 1 1.386848689879305e-4 3.812676855490736e-4 3.857970919413458 -BRAF H3F3A 2 48 38 588 0.6447368421052632 -1 0.7598872440697929 0.8532189495742404 -0.11925084576034849 -BRAF CTNNB1 0 50 35 591 0 -1 0.10034886447636968 0.13553181806345407 -0.9984875375206601 -BRAF NF1 2 48 23 603 1.0923913043478262 1 0.7067673891749486 0.7943027997608368 0.15072349740537597 -BRAF TTN 1 49 22 604 0.5602968460111317 -1 1 1 0 -BRAF ATRX 1 49 22 604 0.5602968460111317 -1 1 1 0 -BRAF FGFR1 0 50 16 610 0 -1 0.622572394888647 0.7003224827718941 -0.20581014001926315 -BRAF NF2 0 50 16 610 0 -1 0.622572394888647 0.7003224827718941 -0.20581014001926315 -BRAF MUC16 1 49 14 612 0.892128279883382 -1 1 1 0 -BRAF PIK3CA 1 49 14 612 0.892128279883382 -1 1 1 0 -BRAF KMT2D 1 49 13 613 0.9623233908948194 -1 0.9999999999999999 1 -4.8216373327664354e-17 -BRAF DNAH5 2 48 12 614 2.1319444444444446 1 0.27746988575524323 0.338209562238978 0.5567841446494538 -BRAF BCOR 1 49 13 613 0.9623233908948194 -1 0.9999999999999999 1 -4.8216373327664354e-17 -BRAF RYR1 2 48 10 616 2.566666666666667 1 0.22051883528599756 0.27231408591264816 0.6565543099992264 -BRAF SMARCA4 1 49 11 615 1.1410018552875696 1 0.6054478055151346 0.6835701030009584 0.21792329059492954 -BRAF KMT2C 1 49 11 615 1.1410018552875696 1 0.6054478055151346 0.6835701030009584 0.21792329059492954 -BRAF OBSCN 1 49 10 616 1.2571428571428571 1 0.5733703913293734 0.6491485484089486 0.24156473764394357 -BRAF ABCA13 1 49 10 616 1.2571428571428571 1 0.5733703913293734 0.6491485484089486 0.24156473764394357 -BRAF SETD2 1 49 10 616 1.2571428571428571 1 0.5733703913293734 0.6491485484089486 0.24156473764394357 -BRAF PDGFRA 1 49 10 616 1.2571428571428571 1 0.5733703913293734 0.6491485484089486 0.24156473764394357 -BRAF PTPN11 1 49 10 616 1.2571428571428571 1 0.5733703913293734 0.6491485484089486 0.24156473764394357 -BRAF DDX3X 0 50 11 615 0 -1 1 1 0 -BRAF RYR2 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF ATM 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF DNAH14 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF EGFR 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF LRP1B 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF PTEN 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF STAG2 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF PPM1D 1 49 9 617 1.399092970521542 1 0.5387413646515625 0.6133440257417883 0.26861967797131725 -BRAF NEB 1 49 8 618 1.5765306122448979 1 0.5013622207821593 0.5761432649701175 0.29984839459797447 -BRAF SYNE1 1 49 8 618 1.5765306122448979 1 0.5013622207821593 0.5761432649701175 0.29984839459797447 -BRAF FSIP2 1 49 8 618 1.5765306122448979 1 0.5013622207821593 0.5761432649701175 0.29984839459797447 -BRAF DNAH8 1 49 8 618 1.5765306122448979 1 0.5013622207821593 0.5761432649701175 0.29984839459797447 -BRAF FBN2 1 49 8 618 1.5765306122448979 1 0.5013622207821593 0.5761432649701175 0.29984839459797447 -BRAF APOB 1 49 8 618 1.5765306122448979 1 0.5013622207821593 0.5761432649701175 0.29984839459797447 -BRAF IDH1 0 50 9 617 0 -1 1 1 0 -BRAF KDM6A 1 49 8 618 1.5765306122448979 1 0.5013622207821593 0.5761432649701175 0.29984839459797447 -BRAF KRAS 0 50 9 617 0 -1 1 1 0 -BRAF PLEC 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF DNAH17 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF FAT1 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF CCDC168 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF DNAH3 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF KIAA1549 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF PCLO 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF MAGEL2 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF PHLPP1 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -BRAF DNAH11 1 49 7 619 1.80466472303207 1 0.46101935838589386 0.5342939583942479 0.33628083802974856 -H3F3A CTNNB1 0 40 35 601 0 -1 0.2571420855050965 0.3137440784300231 -0.5898268381496563 -H3F3A NF1 7 33 18 618 7.282828282828283 1 3.2519621546740323e-4 7.432189625887481e-4 3.4878545172329116 -H3F3A TTN 3 37 20 616 2.497297297297297 1 0.14941300032560698 0.19509102011962068 0.8256116132030772 -H3F3A ATRX 13 27 10 626 30.14074074074074 1 1.0614179556846506e-11 4.334123319045656e-9 10.974113569816861 -H3F3A FGFR1 0 40 16 620 0 -1 0.6160023198944288 0.6942068462471713 -0.21041765225854234 -H3F3A NF2 0 40 16 620 0 -1 0.6160023198944288 0.6942068462471713 -0.21041765225854234 -H3F3A MUC16 5 35 10 626 8.942857142857143 1 0.0010933015596525778 0.0021025029993318807 2.96126003235073 -H3F3A PIK3CA 2 38 13 623 2.522267206477733 1 0.2208323600185032 0.2724266274145684 0.6559372862520612 -H3F3A KMT2D 0 40 14 622 0 -1 1 1 0 -H3F3A DNAH5 4 36 10 626 6.955555555555556 1 0.006855006900295105 0.011409488387040086 2.163992103710562 -H3F3A BCOR 2 38 12 624 2.736842105263158 1 0.19847995342089866 0.24860730362024627 0.7022833506556834 -H3F3A RYR1 3 37 9 627 5.648648648648648 1 0.029109928711809428 0.040660960857430505 1.5359588581168642 -H3F3A SMARCA4 0 40 12 624 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 -H3F3A KMT2C 1 39 11 625 1.456876456876457 1 0.5220013585278479 0.5992986543548395 0.28232836672881045 -H3F3A OBSCN 2 38 9 627 3.6666666666666665 1 0.13393365634966406 0.176264027870797 0.873110274890502 -H3F3A ABCA13 0 40 11 625 0 -1 1 1 0 -H3F3A SETD2 0 40 11 625 0 -1 1 1 0 -H3F3A PDGFRA 3 37 8 628 6.364864864864865 1 0.022756975521636368 0.032190871840651905 1.642885457634845 -H3F3A PTPN11 4 36 7 629 9.984126984126984 1 0.0025752213585867683 0.004765326532128083 2.5891854343195275 -H3F3A DDX3X 0 40 11 625 0 -1 1 1 0 -H3F3A RYR2 1 39 9 627 1.7863247863247864 1 0.4589116464623603 0.5342939583942479 0.3382709204483909 -H3F3A ATM 1 39 9 627 1.7863247863247864 1 0.4589116464623603 0.5342939583942479 0.3382709204483909 -H3F3A DNAH14 1 39 9 627 1.7863247863247864 1 0.4589116464623603 0.5342939583942479 0.3382709204483909 -H3F3A EGFR 1 39 9 627 1.7863247863247864 1 0.4589116464623603 0.5342939583942479 0.3382709204483909 -H3F3A LRP1B 0 40 10 626 0 -1 1 1 0 -H3F3A PTEN 3 37 7 629 7.285714285714286 1 0.017252860749895526 0.025070883058863607 1.7631388829162549 -H3F3A STAG2 0 40 10 626 0 -1 1 1 0 -H3F3A PPM1D 8 32 2 634 79.25 1 3.0574272953023208e-9 2.6752488833895304e-7 8.514643861560502 -H3F3A NEB 1 39 8 628 2.0128205128205128 1 0.42439245325421776 0.5018154008073521 0.37223234753033524 -H3F3A SYNE1 0 40 9 627 0 -1 1 1 0 -H3F3A FSIP2 1 39 8 628 2.0128205128205128 1 0.42439245325421776 0.5018154008073521 0.37223234753033524 -H3F3A DNAH8 0 40 9 627 0 -1 1 1 0 -H3F3A FBN2 0 40 9 627 0 -1 1 1 0 -H3F3A APOB 2 38 7 629 4.7293233082706765 1 0.0944263436547246 0.12809775301997522 1.024906826593838 -H3F3A IDH1 0 40 9 627 0 -1 1 1 0 -H3F3A KDM6A 0 40 9 627 0 -1 1 1 0 -H3F3A KRAS 0 40 9 627 0 -1 1 1 0 -H3F3A PLEC 1 39 7 629 2.304029304029304 1 0.3877295521876073 0.46248169564734076 0.4114710964318261 -H3F3A DNAH17 1 39 7 629 2.304029304029304 1 0.3877295521876073 0.46248169564734076 0.4114710964318261 -H3F3A FAT1 1 39 7 629 2.304029304029304 1 0.3877295521876073 0.46248169564734076 0.4114710964318261 -H3F3A CCDC168 1 39 7 629 2.304029304029304 1 0.3877295521876073 0.46248169564734076 0.4114710964318261 -H3F3A DNAH3 1 39 7 629 2.304029304029304 1 0.3877295521876073 0.46248169564734076 0.4114710964318261 -H3F3A KIAA1549 0 40 8 628 0 -1 1 1 0 -H3F3A PCLO 0 40 8 628 0 -1 1 1 0 -H3F3A MAGEL2 0 40 8 628 0 -1 1 1 0 -H3F3A PHLPP1 0 40 8 628 0 -1 1 1 0 -H3F3A DNAH11 2 38 6 630 5.526315789473684 1 0.07624061212406885 0.10388737469631183 1.1178136254725877 -CTNNB1 NF1 1 34 24 617 0.7561274509803921 -1 1 1 0 -CTNNB1 TTN 2 33 21 620 1.7893217893217894 1 0.3367192742651436 0.40839713957901075 0.47273202329882924 -CTNNB1 ATRX 1 34 22 619 0.8275401069518716 -1 1 1 0 -CTNNB1 FGFR1 1 34 15 626 1.227450980392157 1 0.5770348737642693 0.6526941092901477 0.23879793896609036 -CTNNB1 NF2 0 35 16 625 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 -CTNNB1 MUC16 1 34 14 627 1.3172268907563025 1 0.5533866638309618 0.6294323706526724 0.25697131121315786 -CTNNB1 PIK3CA 3 32 12 629 4.9140625 1 0.03770498967424241 0.05224956148297167 1.4236011738101244 -CTNNB1 KMT2D 4 31 10 631 8.141935483870968 1 0.0041756847359102735 0.007555707240014897 2.3792722979902323 -CTNNB1 DNAH5 1 34 13 628 1.420814479638009 1 0.5284560948263107 0.6061411200020886 0.2769910888990951 -CTNNB1 BCOR 0 35 14 627 0 -1 1 1 0 -CTNNB1 RYR1 1 34 11 630 1.6844919786096257 1 0.4744749109839102 0.5488496373515486 0.3237867470076389 -CTNNB1 SMARCA4 4 31 8 633 10.209677419354838 1 0.0022255353691487093 0.00415591589513288 2.6525654993351524 -CTNNB1 KMT2C 1 34 11 630 1.6844919786096257 1 0.4744749109839102 0.5488496373515486 0.3237867470076389 -CTNNB1 OBSCN 1 34 10 631 1.8558823529411765 1 0.44527907270523864 0.52348067568514145 0.3513677154284146 -CTNNB1 ABCA13 1 34 10 631 1.8558823529411765 1 0.44527907270523864 0.52348067568514145 0.3513677154284146 -CTNNB1 SETD2 1 34 10 631 1.8558823529411765 1 0.44527907270523864 0.52348067568514145 0.3513677154284146 -CTNNB1 PDGFRA 1 34 10 631 1.8558823529411765 1 0.44527907270523864 0.52348067568514145 0.3513677154284146 -CTNNB1 PTPN11 1 34 10 631 1.8558823529411765 1 0.44527907270523864 0.52348067568514145 0.3513677154284146 -CTNNB1 DDX3X 5 30 6 635 17.63888888888889 1 1.0302506727680188e-4 3.139445458061749e-4 3.9870570932029445 -CTNNB1 RYR2 2 33 8 633 4.795454545454546 1 0.09026724933824781 0.12259133086402835 1.0444697913435306 -CTNNB1 ATM 1 34 9 632 2.065359477124183 1 0.41451008307716136 0.4915535835135747 0.382464900646854 -CTNNB1 DNAH14 1 34 9 632 2.065359477124183 1 0.41451008307716136 0.4915535835135747 0.382464900646854 -CTNNB1 EGFR 1 34 9 632 2.065359477124183 1 0.41451008307716136 0.4915535835135747 0.382464900646854 -CTNNB1 LRP1B 1 34 9 632 2.065359477124183 1 0.41451008307716136 0.4915535835135747 0.382464900646854 -CTNNB1 PTEN 1 34 9 632 2.065359477124183 1 0.41451008307716136 0.4915535835135747 0.382464900646854 -CTNNB1 STAG2 2 33 8 633 4.795454545454546 1 0.09026724933824781 0.12259133086402835 1.0444697913435306 -CTNNB1 PPM1D 1 34 9 632 2.065359477124183 1 0.41451008307716136 0.4915535835135747 0.382464900646854 -CTNNB1 NEB 1 34 8 633 2.327205882352941 1 0.3820857997032702 0.45797955443885124 0.417839102654723 -CTNNB1 SYNE1 1 34 8 633 2.327205882352941 1 0.3820857997032702 0.45797955443885124 0.417839102654723 -CTNNB1 FSIP2 1 34 8 633 2.327205882352941 1 0.3820857997032702 0.45797955443885124 0.417839102654723 -CTNNB1 DNAH8 1 34 8 633 2.327205882352941 1 0.3820857997032702 0.45797955443885124 0.417839102654723 -CTNNB1 FBN2 1 34 8 633 2.327205882352941 1 0.3820857997032702 0.45797955443885124 0.417839102654723 -CTNNB1 APOB 1 34 8 633 2.327205882352941 1 0.3820857997032702 0.45797955443885124 0.417839102654723 -CTNNB1 IDH1 0 35 9 632 0 -1 1 1 0 -CTNNB1 KDM6A 0 35 9 632 0 -1 1 1 0 -CTNNB1 KRAS 0 35 9 632 0 -1 1 1 0 -CTNNB1 PLEC 1 34 7 634 2.6638655462184873 1 0.3479199276489485 0.4194900702460256 0.4585206956556248 -CTNNB1 DNAH17 1 34 7 634 2.6638655462184873 1 0.3479199276489485 0.4194900702460256 0.4585206956556248 -CTNNB1 FAT1 2 33 6 635 6.414141414141414 1 0.05993503765163881 0.08175993443569882 1.2223192175085784 -CTNNB1 CCDC168 1 34 7 634 2.6638655462184873 1 0.3479199276489485 0.4194900702460256 0.4585206956556248 -CTNNB1 DNAH3 1 34 7 634 2.6638655462184873 1 0.3479199276489485 0.4194900702460256 0.4585206956556248 -CTNNB1 KIAA1549 1 34 7 634 2.6638655462184873 1 0.3479199276489485 0.4194900702460256 0.4585206956556248 -CTNNB1 PCLO 2 33 6 635 6.414141414141414 1 0.05993503765163881 0.08175993443569882 1.2223192175085784 -CTNNB1 MAGEL2 2 33 6 635 6.414141414141414 1 0.05993503765163881 0.08175993443569882 1.2223192175085784 -CTNNB1 PHLPP1 2 33 6 635 6.414141414141414 1 0.05993503765163881 0.08175993443569882 1.2223192175085784 -CTNNB1 DNAH11 1 34 7 634 2.6638655462184873 1 0.3479199276489485 0.4194900702460256 0.4585206956556248 -NF1 TTN 7 18 16 635 15.434027777777779 1 6.470377935554136e-6 3.5099902469594623e-5 5.189070351397451 -NF1 ATRX 9 16 14 637 25.59375 1 1.5935077159469207e-8 5.915293794045388e-7 7.797645829281521 -NF1 FGFR1 6 19 10 641 20.242105263157896 1 8.546960034613028e-6 4.0739400943194394e-5 5.068188326787042 -NF1 NF2 1 24 15 636 1.7666666666666666 1 0.4565730816966218 0.5342939583942479 0.3404896969089279 -NF1 MUC16 6 19 9 642 22.526315789473685 1 5.475877779983636e-6 3.0215992254414208e-5 5.261546253757741 -NF1 PIK3CA 3 22 12 639 7.261363636363637 1 0.01517095519667468 0.022337043408565484 1.8189870742175438 -NF1 KMT2D 4 21 10 641 12.209523809523809 1 0.0011396899259532094 0.002188276111744015 2.9432132905623885 -NF1 DNAH5 5 20 9 642 17.833333333333332 1 7.31420567903181e-5 2.3703444330195684e-4 4.135832831253565 -NF1 BCOR 3 22 11 640 7.933884297520661 1 0.012439808671960028 0.0189772921832516 1.9051862991750221 -NF1 RYR1 4 21 8 643 15.30952380952381 1 5.928883481714339e-4 0.0012044580870812713 3.227027084609623 -NF1 SMARCA4 4 21 8 643 15.30952380952381 1 5.928883481714339e-4 0.0012044580870812713 3.227027084609623 -NF1 KMT2C 4 21 8 643 15.30952380952381 1 5.928883481714339e-4 0.0012044580870812713 3.227027084609623 -NF1 OBSCN 6 19 5 646 40.8 1 5.580295428263638e-7 8.336416950759703e-6 6.2533428083261535 -NF1 ABCA13 5 20 6 645 26.875 1 1.820699346279158e-5 7.409822920903551e-5 4.739761763722976 -NF1 SETD2 5 20 6 645 26.875 1 1.820699346279158e-5 7.409822920903551e-5 4.739761763722976 -NF1 PDGFRA 3 22 8 643 10.960227272727273 1 0.006072554727788529 0.010536656574420607 2.2166285625056292 -NF1 PTPN11 4 21 7 644 17.523809523809526 1 4.0540365089059975e-4 8.697363788808839e-4 3.392112344556424 -NF1 DDX3X 2 23 9 642 6.202898550724638 1 0.05888383215453288 0.08068534048020445 1.2300039339047535 -NF1 RYR2 5 20 5 646 32.3 1 1.0184737135534708e-5 4.708038864539629e-5 4.99205017550623 -NF1 ATM 5 20 5 646 32.3 1 1.0184737135534708e-5 4.708038864539629e-5 4.99205017550623 -NF1 DNAH14 5 20 5 646 32.3 1 1.0184737135534708e-5 4.708038864539629e-5 4.99205017550623 -NF1 EGFR 3 22 7 644 12.545454545454545 1 0.004526968070452729 0.008143224502649916 2.3441925686536527 -NF1 LRP1B 5 20 5 646 32.3 1 1.0184737135534708e-5 4.708038864539629e-5 4.99205017550623 -NF1 PTEN 5 20 5 646 32.3 1 1.0184737135534708e-5 4.708038864539629e-5 4.99205017550623 -NF1 STAG2 2 23 8 643 6.989130434782608 1 0.049281781713306654 0.06775553602558997 1.3073135992553673 -NF1 PPM1D 5 20 5 646 32.3 1 1.0184737135534708e-5 4.708038864539629e-5 4.99205017550623 -NF1 NEB 5 20 4 647 40.4375 1 5.222363097807325e-6 2.8947487759339245e-5 5.282132936057302 -NF1 SYNE1 6 19 3 648 68.21052631578948 1 1.0659264469427733e-7 2.1060643508143503e-6 6.9722727622784655 -NF1 FSIP2 4 21 5 646 24.60952380952381 1 1.628368146770519e-4 4.4625301561384466e-4 3.7882474016359793 -NF1 DNAH8 6 19 3 648 68.21052631578948 1 1.0659264469427733e-7 2.1060643508143503e-6 6.9722727622784655 -NF1 FBN2 5 20 4 647 40.4375 1 5.222363097807325e-6 2.8947487759339245e-5 5.282132936057302 -NF1 APOB 6 19 3 648 68.21052631578948 1 1.0659264469427733e-7 2.1060643508143503e-6 6.9722727622784655 -NF1 IDH1 0 25 9 642 0 -1 1 1 0 -NF1 KDM6A 2 23 7 644 8 1 0.040330818984735874 0.05582514492237452 1.3943629588269912 -NF1 KRAS 0 25 9 642 0 -1 1 1 0 -NF1 PLEC 4 21 4 647 30.80952380952381 1 9.278594730849865e-5 2.8344834277533877e-4 4.032517793915948 -NF1 DNAH17 5 20 3 648 54 1 2.380268401633405e-6 1.7888520196324668e-5 5.623374068667834 -NF1 FAT1 3 22 5 646 17.618181818181817 1 0.0022197850110445656 0.0041515063183657904 2.6536890854765227 -NF1 CCDC168 5 20 3 648 54 1 2.380268401633405e-6 1.7888520196324668e-5 5.623374068667834 -NF1 DNAH3 4 21 4 647 30.80952380952381 1 9.278594730849865e-5 2.8344834277533877e-4 4.032517793915948 -NF1 KIAA1549 5 20 3 648 54 1 2.380268401633405e-6 1.7888520196324668e-5 5.623374068667834 -NF1 PCLO 5 20 3 648 54 1 2.380268401633405e-6 1.7888520196324668e-5 5.623374068667834 -NF1 MAGEL2 5 20 3 648 54 1 2.380268401633405e-6 1.7888520196324668e-5 5.623374068667834 -NF1 PHLPP1 4 21 4 647 30.80952380952381 1 9.278594730849865e-5 2.8344834277533877e-4 4.032517793915948 -NF1 DNAH11 4 21 4 647 30.80952380952381 1 9.278594730849865e-5 2.8344834277533877e-4 4.032517793915948 -TTN ATRX 5 18 18 635 9.799382716049383 1 6.489147188876543e-4 0.0013118033089405785 3.1878123749255565 -TTN FGFR1 2 21 14 639 4.346938775510204 1 0.09950215438375438 0.13453657739525288 1.0021675159693768 -TTN NF2 1 22 15 638 1.9333333333333333 1 0.42890892097100924 0.5066667581383668 0.36763492068051007 -TTN MUC16 4 19 11 642 12.287081339712918 1 0.0010893650361091583 0.0020982266811850926 2.9628265678076415 -TTN PIK3CA 3 20 12 641 8.0125 1 0.012001971744716717 0.018479734079905396 1.9207473999935232 -TTN KMT2D 5 18 9 644 19.876543209876544 1 4.7395428045139795e-5 1.7570116261193534e-4 4.324263550109301 -TTN DNAH5 6 17 8 645 28.455882352941178 1 1.9603898311530575e-6 1.5199224956724655e-5 5.707657558906586 -TTN BCOR 2 21 12 641 5.087301587301587 1 0.07862083746107339 0.10701169543312766 1.1044623344311433 -TTN RYR1 4 19 8 645 16.973684210526315 1 4.2317393958939207e-4 9.046912321064664e-4 3.3734810853987027 -TTN SMARCA4 5 18 7 646 25.634920634920636 1 1.9621185415991806e-5 7.778625286275068e-5 4.707274758216404 -TTN KMT2C 5 18 7 646 25.634920634920636 1 1.9621185415991806e-5 7.778625286275068e-5 4.707274758216404 -TTN OBSCN 7 16 4 649 70.984375 1 5.9910437610317476e-9 3.194166137318371e-7 8.222497508133689 -TTN ABCA13 6 17 5 648 45.741176470588236 1 3.2227199702566783e-7 5.805635240535928e-6 6.491777429720636 -TTN SETD2 4 19 7 646 19.428571428571427 1 2.8865635486492475e-4 6.634222039578478e-4 3.539618876923743 -TTN PDGFRA 3 20 8 645 12.09375 1 0.004761366046953449 0.00853978536971885 2.3222684293087137 -TTN PTPN11 2 21 9 644 6.814814814814815 1 0.050553393846907296 0.06934816065225245 1.2962496832083343 -TTN DDX3X 4 19 7 646 19.428571428571427 1 2.8865635486492475e-4 6.634222039578478e-4 3.539618876923743 -TTN RYR2 4 19 6 647 22.70175438596491 1 1.879480026647892e-4 4.708308860211999e-4 3.72596228520034 -TTN ATM 5 18 5 648 36 1 6.5328798065857745e-6 3.5099902469594623e-5 5.184895331985718 -TTN DNAH14 5 18 5 648 36 1 6.5328798065857745e-6 3.5099902469594623e-5 5.184895331985718 -TTN EGFR 3 20 7 646 13.842857142857143 1 0.0035415361309293018 0.0064463324820035585 2.4508083231488955 -TTN LRP1B 5 18 5 648 36 1 6.5328798065857745e-6 3.5099902469594623e-5 5.184895331985718 -TTN PTEN 3 20 7 646 13.842857142857143 1 0.0035415361309293018 0.0064463324820035585 2.4508083231488955 -TTN STAG2 2 21 8 645 7.678571428571429 1 0.04222757061055205 0.058187597298004795 1.3744039032016757 -TTN PPM1D 3 20 7 646 13.842857142857143 1 0.0035415361309293018 0.0064463324820035585 2.4508083231488955 -TTN NEB 6 17 3 650 76.47058823529412 1 6.123720550931626e-8 1.389177347202082e-6 7.212984636059581 -TTN SYNE1 6 17 3 650 76.47058823529412 1 6.123720550931626e-8 1.389177347202082e-6 7.212984636059581 -TTN FSIP2 5 18 4 649 45.06944444444444 1 3.341317460006288e-6 2.0990327633372832e-5 5.476082259896394 -TTN DNAH8 4 19 5 648 27.28421052631579 1 1.1538195352150807e-4 3.4899479768851207e-4 3.937862112314702 -TTN FBN2 5 18 4 649 45.06944444444444 1 3.341317460006288e-6 2.0990327633372832e-5 5.476082259896394 -TTN APOB 6 17 3 650 76.47058823529412 1 6.123720550931626e-8 1.389177347202082e-6 7.212984636059581 -TTN IDH1 0 23 9 644 0 -1 1 1 0 -TTN KDM6A 3 20 6 647 16.175 1 0.002535459692449953 0.004698847387672 2.595943289271387 -TTN KRAS 0 23 9 644 0 -1 1 1 0 -TTN PLEC 5 18 3 650 60.18518518518518 1 1.5190506519524197e-6 1.3617030029153425e-5 5.818427744572582 -TTN DNAH17 5 18 3 650 60.18518518518518 1 1.5190506519524197e-6 1.3617030029153425e-5 5.818427744572582 -TTN FAT1 3 20 5 648 19.44 1 0.001728767112807133 0.0032549937119037333 2.7622635078452227 -TTN CCDC168 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -TTN DNAH3 5 18 3 650 60.18518518518518 1 1.5190506519524197e-6 1.3617030029153425e-5 5.818427744572582 -TTN KIAA1549 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -TTN PCLO 6 17 2 651 114.88235294117646 1 2.086698699243026e-8 6.855399254357524e-7 7.68054025467327 -TTN MAGEL2 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -TTN PHLPP1 5 18 3 650 60.18518518518518 1 1.5190506519524197e-6 1.3617030029153425e-5 5.818427744572582 -TTN DNAH11 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -ATRX FGFR1 2 21 14 639 4.346938775510204 1 0.09950215438375438 0.13453657739525288 1.0021675159693768 -ATRX NF2 2 21 14 639 4.346938775510204 1 0.09950215438375438 0.13453657739525288 1.0021675159693768 -ATRX MUC16 5 18 10 643 17.86111111111111 1 6.949525025798564e-5 2.2762481702147703e-4 4.158044876808988 -ATRX PIK3CA 4 19 11 642 12.287081339712918 1 0.0010893650361091583 0.0020982266811850926 2.9628265678076415 -ATRX KMT2D 4 19 10 643 13.536842105263158 1 8.173997598821798e-4 0.001612423036804622 3.087565494201939 -ATRX DNAH5 4 19 10 643 13.536842105263158 1 8.173997598821798e-4 0.001612423036804622 3.087565494201939 -ATRX BCOR 3 20 11 642 8.754545454545454 1 0.009819450402995198 0.015806605445031693 2.0079128190996096 -ATRX RYR1 5 18 7 646 25.634920634920636 1 1.9621185415991806e-5 7.778625286275068e-5 4.707274758216404 -ATRX SMARCA4 4 19 8 645 16.973684210526315 1 4.2317393958939207e-4 9.046912321064664e-4 3.3734810853987027 -ATRX KMT2C 3 20 9 644 10.733333333333333 1 0.006207430082741453 0.010755448163165884 2.207088163412638 -ATRX OBSCN 5 18 6 647 29.953703703703702 1 1.1708386314552596e-5 5.159270947959327e-5 4.931502956590943 -ATRX ABCA13 4 19 7 646 19.428571428571427 1 2.8865635486492475e-4 6.634222039578478e-4 3.539618876923743 -ATRX SETD2 4 19 7 646 19.428571428571427 1 2.8865635486492475e-4 6.634222039578478e-4 3.539618876923743 -ATRX PDGFRA 4 19 7 646 19.428571428571427 1 2.8865635486492475e-4 6.634222039578478e-4 3.539618876923743 -ATRX PTPN11 3 20 8 645 12.09375 1 0.004761366046953449 0.00853978536971885 2.3222684293087137 -ATRX DDX3X 2 21 9 644 6.814814814814815 1 0.050553393846907296 0.06934816065225245 1.2962496832083343 -ATRX RYR2 4 19 6 647 22.70175438596491 1 1.879480026647892e-4 4.708308860211999e-4 3.72596228520034 -ATRX ATM 5 18 5 648 36 1 6.5328798065857745e-6 3.5099902469594623e-5 5.184895331985718 -ATRX DNAH14 3 20 7 646 13.842857142857143 1 0.0035415361309293018 0.0064463324820035585 2.4508083231488955 -ATRX EGFR 3 20 7 646 13.842857142857143 1 0.0035415361309293018 0.0064463324820035585 2.4508083231488955 -ATRX LRP1B 3 20 7 646 13.842857142857143 1 0.0035415361309293018 0.0064463324820035585 2.4508083231488955 -ATRX PTEN 4 19 6 647 22.70175438596491 1 1.879480026647892e-4 4.708308860211999e-4 3.72596228520034 -ATRX STAG2 2 21 8 645 7.678571428571429 1 0.04222757061055205 0.058187597298004795 1.3744039032016757 -ATRX PPM1D 8 15 2 651 173.6 1 2.0425235263485734e-11 6.255228299442506e-9 10.689832932443272 -ATRX NEB 5 18 4 649 45.06944444444444 1 3.341317460006288e-6 2.0990327633372832e-5 5.476082259896394 -ATRX SYNE1 4 19 5 648 27.28421052631579 1 1.1538195352150807e-4 3.4899479768851207e-4 3.937862112314702 -ATRX FSIP2 4 19 5 648 27.28421052631579 1 1.1538195352150807e-4 3.4899479768851207e-4 3.937862112314702 -ATRX DNAH8 3 20 6 647 16.175 1 0.002535459692449953 0.004698847387672 2.595943289271387 -ATRX FBN2 3 20 6 647 16.175 1 0.002535459692449953 0.004698847387672 2.595943289271387 -ATRX APOB 5 18 4 649 45.06944444444444 1 3.341317460006288e-6 2.0990327633372832e-5 5.476082259896394 -ATRX IDH1 5 18 4 649 45.06944444444444 1 3.341317460006288e-6 2.0990327633372832e-5 5.476082259896394 -ATRX KDM6A 2 21 7 646 8.789115646258503 1 0.03449036371462749 0.04795765669741053 1.462302225800112 -ATRX KRAS 0 23 9 644 0 -1 1 1 0 -ATRX PLEC 3 20 5 648 19.44 1 0.001728767112807133 0.0032549937119037333 2.7622635078452227 -ATRX DNAH17 5 18 3 650 60.18518518518518 1 1.5190506519524197e-6 1.3617030029153425e-5 5.818427744572582 -ATRX FAT1 3 20 5 648 19.44 1 0.001728767112807133 0.0032549937119037333 2.7622635078452227 -ATRX CCDC168 3 20 5 648 19.44 1 0.001728767112807133 0.0032549937119037333 2.7622635078452227 -ATRX DNAH3 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -ATRX KIAA1549 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -ATRX PCLO 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -ATRX MAGEL2 3 20 5 648 19.44 1 0.001728767112807133 0.0032549937119037333 2.7622635078452227 -ATRX PHLPP1 3 20 5 648 19.44 1 0.001728767112807133 0.0032549937119037333 2.7622635078452227 -ATRX DNAH11 4 19 4 649 34.1578947368421 1 6.55861152719518e-5 2.153967592711554e-4 4.183188092011805 -FGFR1 NF2 1 15 15 645 2.8666666666666667 1 0.3213318496264703 0.3901204319052787 0.49304622610891985 -FGFR1 MUC16 2 14 13 647 7.1098901098901095 1 0.046105340932497796 0.06345959847450539 1.3362487621774461 -FGFR1 PIK3CA 5 11 10 650 29.545454545454547 1 9.857069108863869e-6 4.662127281219398e-5 5.006252198554291 -FGFR1 KMT2D 2 14 12 648 7.714285714285714 1 0.0405141838741057 0.0559525087325586 1.392392905184422 -FGFR1 DNAH5 2 14 12 648 7.714285714285714 1 0.0405141838741057 0.0559525087325586 1.392392905184422 -FGFR1 BCOR 0 16 14 646 0 -1 1 1 0 -FGFR1 RYR1 2 14 10 650 9.285714285714286 1 0.030208652686227685 0.04205181765980558 1.5198686439417148 -FGFR1 SMARCA4 2 14 10 650 9.285714285714286 1 0.030208652686227685 0.04205181765980558 1.5198686439417148 -FGFR1 KMT2C 2 14 10 650 9.285714285714286 1 0.030208652686227685 0.04205181765980558 1.5198686439417148 -FGFR1 OBSCN 2 14 9 651 10.333333333333334 1 0.025525127291718623 0.035817045741529566 1.5930320834446507 -FGFR1 ABCA13 2 14 9 651 10.333333333333334 1 0.025525127291718623 0.035817045741529566 1.5930320834446507 -FGFR1 SETD2 2 14 9 651 10.333333333333334 1 0.025525127291718623 0.035817045741529566 1.5930320834446507 -FGFR1 PDGFRA 2 14 9 651 10.333333333333334 1 0.025525127291718623 0.035817045741529566 1.5930320834446507 -FGFR1 PTPN11 3 13 8 652 18.807692307692307 1 0.0016038954380434847 0.003050888061495759 2.7948239478728762 -FGFR1 DDX3X 1 15 10 650 4.333333333333333 1 0.23316141978161875 0.28590864788036335 0.6323433088104533 -FGFR1 RYR2 2 14 8 652 11.642857142857142 1 0.021175812409232237 0.03023353170315791 1.674159918986466 -FGFR1 ATM 2 14 8 652 11.642857142857142 1 0.021175812409232237 0.03023353170315791 1.674159918986466 -FGFR1 DNAH14 2 14 8 652 11.642857142857142 1 0.021175812409232237 0.03023353170315791 1.674159918986466 -FGFR1 EGFR 2 14 8 652 11.642857142857142 1 0.021175812409232237 0.03023353170315791 1.674159918986466 -FGFR1 LRP1B 2 14 8 652 11.642857142857142 1 0.021175812409232237 0.03023353170315791 1.674159918986466 -FGFR1 PTEN 2 14 8 652 11.642857142857142 1 0.021175812409232237 0.03023353170315791 1.674159918986466 -FGFR1 STAG2 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -FGFR1 PPM1D 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -FGFR1 NEB 2 14 7 653 13.326530612244898 1 0.017177377837817594 0.0249908406785351 1.7650431313942652 -FGFR1 SYNE1 2 14 7 653 13.326530612244898 1 0.017177377837817594 0.0249908406785351 1.7650431313942652 -FGFR1 FSIP2 2 14 7 653 13.326530612244898 1 0.017177377837817594 0.0249908406785351 1.7650431313942652 -FGFR1 DNAH8 3 13 6 654 25.153846153846153 1 8.407416409810853e-4 0.0016558014633469926 3.075337441936414 -FGFR1 FBN2 2 14 7 653 13.326530612244898 1 0.017177377837817594 0.0249908406785351 1.7650431313942652 -FGFR1 APOB 2 14 7 653 13.326530612244898 1 0.017177377837817594 0.0249908406785351 1.7650431313942652 -FGFR1 IDH1 0 16 9 651 0 -1 1 1 0 -FGFR1 KDM6A 0 16 9 651 0 -1 1 1 0 -FGFR1 KRAS 1 15 8 652 5.433333333333334 1 0.19497443511338827 0.24446641045435072 0.7100223292376966 -FGFR1 PLEC 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 DNAH17 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 FAT1 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 CCDC168 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 DNAH3 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 KIAA1549 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 PCLO 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 MAGEL2 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 PHLPP1 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -FGFR1 DNAH11 2 14 6 654 15.571428571428571 1 0.013547014238520599 0.020237917612424064 1.8681564127320534 -NF2 MUC16 1 15 14 646 3.0761904761904764 1 0.3044966707024759 0.3700480373120366 0.5164174514824945 -NF2 PIK3CA 0 16 15 645 0 -1 1 1 0 -NF2 KMT2D 1 15 13 647 3.317948717948718 1 0.28727058205114403 0.34946024132338777 0.5417088456648597 -NF2 DNAH5 1 15 13 647 3.317948717948718 1 0.28727058205114403 0.34946024132338777 0.5417088456648597 -NF2 BCOR 0 16 14 646 0 -1 1 1 0 -NF2 RYR1 1 15 11 649 3.933333333333333 1 0.2516116713357453 0.3076090792278323 0.5992692174431938 -NF2 SMARCA4 1 15 11 649 3.933333333333333 1 0.2516116713357453 0.3076090792278323 0.5992692174431938 -NF2 KMT2C 1 15 11 649 3.933333333333333 1 0.2516116713357453 0.3076090792278323 0.5992692174431938 -NF2 OBSCN 1 15 10 650 4.333333333333333 1 0.23316141978161875 0.28590864788036335 0.6323433088104533 -NF2 ABCA13 1 15 10 650 4.333333333333333 1 0.23316141978161875 0.28590864788036335 0.6323433088104533 -NF2 SETD2 1 15 10 650 4.333333333333333 1 0.23316141978161875 0.28590864788036335 0.6323433088104533 -NF2 PDGFRA 1 15 10 650 4.333333333333333 1 0.23316141978161875 0.28590864788036335 0.6323433088104533 -NF2 PTPN11 0 16 11 649 0 -1 1 1 0 -NF2 DDX3X 1 15 10 650 4.333333333333333 1 0.23316141978161875 0.28590864788036335 0.6323433088104533 -NF2 RYR2 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -NF2 ATM 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -NF2 DNAH14 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -NF2 EGFR 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -NF2 LRP1B 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -NF2 PTEN 1 15 9 651 4.822222222222222 1 0.21428539319162795 0.2651511178381255 0.6690074317228826 -NF2 STAG2 0 16 10 650 0 -1 1 1 0 -NF2 PPM1D 0 16 10 650 0 -1 1 1 0 -NF2 NEB 1 15 8 652 5.433333333333334 1 0.19497443511338827 0.24446641045435072 0.7100223292376966 -NF2 SYNE1 1 15 8 652 5.433333333333334 1 0.19497443511338827 0.24446641045435072 0.7100223292376966 -NF2 FSIP2 1 15 8 652 5.433333333333334 1 0.19497443511338827 0.24446641045435072 0.7100223292376966 -NF2 DNAH8 1 15 8 652 5.433333333333334 1 0.19497443511338827 0.24446641045435072 0.7100223292376966 -NF2 FBN2 1 15 8 652 5.433333333333334 1 0.19497443511338827 0.24446641045435072 0.7100223292376966 -NF2 APOB 1 15 8 652 5.433333333333334 1 0.19497443511338827 0.24446641045435072 0.7100223292376966 -NF2 IDH1 0 16 9 651 0 -1 1 1 0 -NF2 KDM6A 0 16 9 651 0 -1 1 1 0 -NF2 KRAS 0 16 9 651 0 -1 1 1 0 -NF2 PLEC 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 DNAH17 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 FAT1 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 CCDC168 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 DNAH3 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 KIAA1549 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 PCLO 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 MAGEL2 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 PHLPP1 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -NF2 DNAH11 1 15 7 653 6.219047619047619 1 0.17521920652721373 0.22312217047384286 0.7564182906815993 -MUC16 PIK3CA 3 12 12 649 13.520833333333334 1 0.003435558694334656 0.006309684258710576 2.4640026274147586 -MUC16 KMT2D 3 12 11 650 14.772727272727273 1 0.002785805817928847 0.005131747559342613 2.555049158960536 -MUC16 DNAH5 4 11 10 651 23.672727272727272 1 1.3881256143256066e-4 3.812676855490736e-4 3.857571231907064 -MUC16 BCOR 3 12 11 650 14.772727272727273 1 0.002785805817928847 0.005131747559342613 2.555049158960536 -MUC16 RYR1 4 11 8 653 29.681818181818183 1 7.048809101382474e-5 2.290395530290061e-4 4.151884251006651 -MUC16 SMARCA4 4 11 8 653 29.681818181818183 1 7.048809101382474e-5 2.290395530290061e-4 4.151884251006651 -MUC16 KMT2C 4 11 8 653 29.681818181818183 1 7.048809101382474e-5 2.290395530290061e-4 4.151884251006651 -MUC16 OBSCN 4 11 7 654 33.97402597402598 1 4.7618600805846965e-5 1.7570116261193534e-4 4.322223369771694 -MUC16 ABCA13 4 11 7 654 33.97402597402598 1 4.7618600805846965e-5 1.7570116261193534e-4 4.322223369771694 -MUC16 SETD2 4 11 7 654 33.97402597402598 1 4.7618600805846965e-5 1.7570116261193534e-4 4.322223369771694 -MUC16 PDGFRA 3 12 8 653 20.40625 1 0.0013149695164979495 0.0025169338401718564 2.881084314832154 -MUC16 PTPN11 2 13 9 652 11.145299145299145 1 0.022534973310009223 0.0319136905257356 1.6471429519627654 -MUC16 DDX3X 1 14 10 651 4.65 1 0.22018415150099999 0.2721751620471493 0.6572139440534894 -MUC16 RYR2 4 11 6 655 39.696969696969695 1 3.0706495175260097e-5 1.1718210775605488e-4 4.512769750893585 -MUC16 ATM 4 11 6 655 39.696969696969695 1 3.0706495175260097e-5 1.1718210775605488e-4 4.512769750893585 -MUC16 DNAH14 5 10 5 656 65.6 1 6.132751562541401e-7 9.051350197726766e-6 6.212344628203874 -MUC16 EGFR 4 11 6 655 39.696969696969695 1 3.0706495175260097e-5 1.1718210775605488e-4 4.512769750893585 -MUC16 LRP1B 4 11 6 655 39.696969696969695 1 3.0706495175260097e-5 1.1718210775605488e-4 4.512769750893585 -MUC16 PTEN 4 11 6 655 39.696969696969695 1 3.0706495175260097e-5 1.1718210775605488e-4 4.512769750893585 -MUC16 STAG2 2 13 8 653 12.557692307692308 1 0.018676790802098102 0.026980033882747848 1.72869774570094 -MUC16 PPM1D 4 11 6 655 39.696969696969695 1 3.0706495175260097e-5 1.1718210775605488e-4 4.512769750893585 -MUC16 NEB 4 11 5 656 47.70909090909091 1 1.8669207167657748e-5 7.473783915157105e-5 4.72887412500874 -MUC16 SYNE1 5 10 4 657 82.125 1 3.105080036238988e-7 5.677198573720538e-6 6.507927201011084 -MUC16 FSIP2 4 11 5 656 47.70909090909091 1 1.8669207167657748e-5 7.473783915157105e-5 4.72887412500874 -MUC16 DNAH8 4 11 5 656 47.70909090909091 1 1.8669207167657748e-5 7.473783915157105e-5 4.72887412500874 -MUC16 FBN2 4 11 5 656 47.70909090909091 1 1.8669207167657748e-5 7.473783915157105e-5 4.72887412500874 -MUC16 APOB 4 11 5 656 47.70909090909091 1 1.8669207167657748e-5 7.473783915157105e-5 4.72887412500874 -MUC16 IDH1 0 15 9 652 0 -1 1 1 0 -MUC16 KDM6A 1 14 8 653 5.830357142857143 1 0.18386211903366506 0.23364221557701212 0.7355077388928428 -MUC16 KRAS 0 15 9 652 0 -1 1 1 0 -MUC16 PLEC 4 11 4 657 59.72727272727273 1 1.0509785316975961e-5 4.750733215238211e-5 4.9784061551996315 -MUC16 DNAH17 4 11 4 657 59.72727272727273 1 1.0509785316975961e-5 4.750733215238211e-5 4.9784061551996315 -MUC16 FAT1 3 12 5 656 32.8 1 4.647176016715894e-4 9.815156242201674e-4 3.332810877845914 -MUC16 CCDC168 3 12 5 656 32.8 1 4.647176016715894e-4 9.815156242201674e-4 3.332810877845914 -MUC16 DNAH3 4 11 4 657 59.72727272727273 1 1.0509785316975961e-5 4.750733215238211e-5 4.9784061551996315 -MUC16 KIAA1549 3 12 5 656 32.8 1 4.647176016715894e-4 9.815156242201674e-4 3.332810877845914 -MUC16 PCLO 4 11 4 657 59.72727272727273 1 1.0509785316975961e-5 4.750733215238211e-5 4.9784061551996315 -MUC16 MAGEL2 3 12 5 656 32.8 1 4.647176016715894e-4 9.815156242201674e-4 3.332810877845914 -MUC16 PHLPP1 4 11 4 657 59.72727272727273 1 1.0509785316975961e-5 4.750733215238211e-5 4.9784061551996315 -MUC16 DNAH11 4 11 4 657 59.72727272727273 1 1.0509785316975961e-5 4.750733215238211e-5 4.9784061551996315 -PIK3CA KMT2D 2 13 12 649 8.320512820512821 1 0.03587322152413242 0.049767493054430595 1.4452296206105995 -PIK3CA DNAH5 3 12 11 650 14.772727272727273 1 0.002785805817928847 0.005131747559342613 2.555049158960536 -PIK3CA BCOR 2 13 12 649 8.320512820512821 1 0.03587322152413242 0.049767493054430595 1.4452296206105995 -PIK3CA RYR1 2 13 10 651 10.015384615384615 1 0.02669600864034588 0.03737441209648423 1.57355366579086 -PIK3CA SMARCA4 3 12 9 652 18.11111111111111 1 0.0017297966583259838 0.0032549937119037333 2.7620049462106824 -PIK3CA KMT2C 2 13 10 651 10.015384615384615 1 0.02669600864034588 0.03737441209648423 1.57355366579086 -PIK3CA OBSCN 2 13 9 652 11.145299145299145 1 0.022534973310009223 0.0319136905257356 1.6471429519627654 -PIK3CA ABCA13 2 13 9 652 11.145299145299145 1 0.022534973310009223 0.0319136905257356 1.6471429519627654 -PIK3CA SETD2 2 13 9 652 11.145299145299145 1 0.022534973310009223 0.0319136905257356 1.6471429519627654 -PIK3CA PDGFRA 2 13 9 652 11.145299145299145 1 0.022534973310009223 0.0319136905257356 1.6471429519627654 -PIK3CA PTPN11 3 12 8 653 20.40625 1 0.0013149695164979495 0.0025169338401718564 2.881084314832154 -PIK3CA DDX3X 0 15 11 650 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 -PIK3CA RYR2 2 13 8 653 12.557692307692308 1 0.018676790802098102 0.026980033882747848 1.72869774570094 -PIK3CA ATM 2 13 8 653 12.557692307692308 1 0.018676790802098102 0.026980033882747848 1.72869774570094 -PIK3CA DNAH14 3 12 7 654 23.357142857142858 1 9.693283576728295e-4 0.0018818181270193598 3.0135290818044433 -PIK3CA EGFR 3 12 7 654 23.357142857142858 1 9.693283576728295e-4 0.0018818181270193598 3.0135290818044433 -PIK3CA LRP1B 2 13 8 653 12.557692307692308 1 0.018676790802098102 0.026980033882747848 1.72869774570094 -PIK3CA PTEN 2 13 8 653 12.557692307692308 1 0.018676790802098102 0.026980033882747848 1.72869774570094 -PIK3CA STAG2 3 12 7 654 23.357142857142858 1 9.693283576728295e-4 0.0018818181270193598 3.0135290818044433 -PIK3CA PPM1D 3 12 7 654 23.357142857142858 1 9.693283576728295e-4 0.0018818181270193598 3.0135290818044433 -PIK3CA NEB 2 13 7 654 14.373626373626374 1 0.015135298313213015 0.022311360329345296 1.8200090147797223 -PIK3CA SYNE1 2 13 7 654 14.373626373626374 1 0.015135298313213015 0.022311360329345296 1.8200090147797223 -PIK3CA FSIP2 2 13 7 654 14.373626373626374 1 0.015135298313213015 0.022311360329345296 1.8200090147797223 -PIK3CA DNAH8 2 13 7 654 14.373626373626374 1 0.015135298313213015 0.022311360329345296 1.8200090147797223 -PIK3CA FBN2 2 13 7 654 14.373626373626374 1 0.015135298313213015 0.022311360329345296 1.8200090147797223 -PIK3CA APOB 2 13 7 654 14.373626373626374 1 0.015135298313213015 0.022311360329345296 1.8200090147797223 -PIK3CA IDH1 0 15 9 652 0 -1 1 1 0 -PIK3CA KDM6A 2 13 7 654 14.373626373626374 1 0.015135298313213015 0.022311360329345296 1.8200090147797223 -PIK3CA KRAS 0 15 9 652 0 -1 1 1 0 -PIK3CA PLEC 2 13 6 655 16.794871794871796 1 0.011924730198926472 0.01846750252046135 1.923551438236945 -PIK3CA DNAH17 3 12 5 656 32.8 1 4.647176016715894e-4 9.815156242201674e-4 3.332810877845914 -PIK3CA FAT1 3 12 5 656 32.8 1 4.647176016715894e-4 9.815156242201674e-4 3.332810877845914 -PIK3CA CCDC168 2 13 6 655 16.794871794871796 1 0.011924730198926472 0.01846750252046135 1.923551438236945 -PIK3CA DNAH3 3 12 5 656 32.8 1 4.647176016715894e-4 9.815156242201674e-4 3.332810877845914 -PIK3CA KIAA1549 2 13 6 655 16.794871794871796 1 0.011924730198926472 0.01846750252046135 1.923551438236945 -PIK3CA PCLO 2 13 6 655 16.794871794871796 1 0.011924730198926472 0.01846750252046135 1.923551438236945 -PIK3CA MAGEL2 2 13 6 655 16.794871794871796 1 0.011924730198926472 0.01846750252046135 1.923551438236945 -PIK3CA PHLPP1 2 13 6 655 16.794871794871796 1 0.011924730198926472 0.01846750252046135 1.923551438236945 -PIK3CA DNAH11 2 13 6 655 16.794871794871796 1 0.011924730198926472 0.01846750252046135 1.923551438236945 -KMT2D DNAH5 3 11 11 651 16.140495867768596 1 0.00225640716662959 0.00420075802298062 2.646582529571204 -KMT2D BCOR 1 13 13 649 3.8402366863905324 1 0.2561166347890158 0.31280446422387276 0.5915622131658552 -KMT2D RYR1 3 11 9 653 19.78787878787879 1 0.0013979349448635507 0.0026632508669639965 2.8545130387077697 -KMT2D SMARCA4 5 9 7 655 51.98412698412698 1 1.2641723353648724e-6 1.2905092590183073e-5 5.898193717828728 -KMT2D KMT2C 4 10 8 654 32.7 1 5.219249884744239e-5 1.9142458409615847e-4 4.282391909703732 -KMT2D OBSCN 4 10 7 655 37.42857142857143 1 3.5216390010083226e-5 1.3273870080723676e-4 4.45325516509374 -KMT2D ABCA13 4 10 7 655 37.42857142857143 1 3.5216390010083226e-5 1.3273870080723676e-4 4.45325516509374 -KMT2D SETD2 5 9 6 656 60.74074074074074 1 7.45817867048564e-7 1.0279140755791426e-5 6.127367216754206 -KMT2D PDGFRA 3 11 8 654 22.295454545454547 1 0.001061499333359525 0.002051004232437568 2.9740802742425614 -KMT2D PTPN11 2 12 9 653 12.092592592592593 1 0.019705639470874385 0.02833263891058817 1.70540946720965 -KMT2D DDX3X 4 10 7 655 37.42857142857143 1 3.5216390010083226e-5 1.3273870080723676e-4 4.45325516509374 -KMT2D RYR2 4 10 6 656 43.733333333333334 1 2.2681636503525158e-5 8.820636418037561e-5 4.644325613852755 -KMT2D ATM 4 10 6 656 43.733333333333334 1 2.2681636503525158e-5 8.820636418037561e-5 4.644325613852755 -KMT2D DNAH14 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -KMT2D EGFR 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -KMT2D LRP1B 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -KMT2D PTEN 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -KMT2D STAG2 2 12 8 654 13.625 1 0.016315795809508062 0.02387915157305541 1.78739173847132 -KMT2D PPM1D 2 12 8 654 13.625 1 0.016315795809508062 0.02387915157305541 1.78739173847132 -KMT2D NEB 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -KMT2D SYNE1 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -KMT2D FSIP2 3 11 6 656 29.818181818181817 1 5.53927280572376e-4 0.0011309348645019343 3.256547245594799 -KMT2D DNAH8 3 11 6 656 29.818181818181817 1 5.53927280572376e-4 0.0011309348645019343 3.256547245594799 -KMT2D FBN2 3 11 6 656 29.818181818181817 1 5.53927280572376e-4 0.0011309348645019343 3.256547245594799 -KMT2D APOB 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -KMT2D IDH1 0 14 9 653 0 -1 1 1 0 -KMT2D KDM6A 2 12 7 655 15.595238095238095 1 0.013208957444641097 0.01997650971566092 1.8791314589870862 -KMT2D KRAS 0 14 9 653 0 -1 1 1 0 -KMT2D PLEC 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -KMT2D DNAH17 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -KMT2D FAT1 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -KMT2D CCDC168 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -KMT2D DNAH3 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -KMT2D KIAA1549 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -KMT2D PCLO 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -KMT2D MAGEL2 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -KMT2D PHLPP1 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -KMT2D DNAH11 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -DNAH5 BCOR 3 11 11 651 16.140495867768596 1 0.00225640716662959 0.00420075802298062 2.646582529571204 -DNAH5 RYR1 3 11 9 653 19.78787878787879 1 0.0013979349448635507 0.0026632508669639965 2.8545130387077697 -DNAH5 SMARCA4 3 11 9 653 19.78787878787879 1 0.0013979349448635507 0.0026632508669639965 2.8545130387077697 -DNAH5 KMT2C 4 10 8 654 32.7 1 5.219249884744239e-5 1.9142458409615847e-4 4.282391909703732 -DNAH5 OBSCN 4 10 7 655 37.42857142857143 1 3.5216390010083226e-5 1.3273870080723676e-4 4.45325516509374 -DNAH5 ABCA13 6 8 5 657 98.55 1 1.0165412776480914e-8 5.13981694072449e-7 7.992874981717706 -DNAH5 SETD2 3 11 8 654 22.295454545454547 1 0.001061499333359525 0.002051004232437568 2.9740802742425614 -DNAH5 PDGFRA 3 11 8 654 22.295454545454547 1 0.001061499333359525 0.002051004232437568 2.9740802742425614 -DNAH5 PTPN11 2 12 9 653 12.092592592592593 1 0.019705639470874385 0.02833263891058817 1.70540946720965 -DNAH5 DDX3X 1 13 10 652 5.015384615384615 1 0.20700753962160068 0.25823241958906396 0.6840138363960979 -DNAH5 RYR2 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -DNAH5 ATM 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -DNAH5 DNAH14 4 10 6 656 43.733333333333334 1 2.2681636503525158e-5 8.820636418037561e-5 4.644325613852755 -DNAH5 EGFR 4 10 6 656 43.733333333333334 1 2.2681636503525158e-5 8.820636418037561e-5 4.644325613852755 -DNAH5 LRP1B 5 9 5 657 73 1 4.1143038783397853e-7 7.304380073864112e-6 6.385703634903732 -DNAH5 PTEN 4 10 6 656 43.733333333333334 1 2.2681636503525158e-5 8.820636418037561e-5 4.644325613852755 -DNAH5 STAG2 2 12 8 654 13.625 1 0.016315795809508062 0.02387915157305541 1.78739173847132 -DNAH5 PPM1D 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -DNAH5 NEB 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -DNAH5 SYNE1 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -DNAH5 FSIP2 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -DNAH5 DNAH8 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -DNAH5 FBN2 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -DNAH5 APOB 4 10 5 657 52.56 1 1.3773554057248686e-5 5.8181392138378075e-5 4.8609539821617425 -DNAH5 IDH1 0 14 9 653 0 -1 1 1 0 -DNAH5 KDM6A 1 13 8 654 6.288461538461538 1 0.17261366431896827 0.22211317099867242 0.762924827952004 -DNAH5 KRAS 0 14 9 653 0 -1 1 1 0 -DNAH5 PLEC 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -DNAH5 DNAH17 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -DNAH5 FAT1 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -DNAH5 CCDC168 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -DNAH5 DNAH3 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -DNAH5 KIAA1549 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -DNAH5 PCLO 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -DNAH5 MAGEL2 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -DNAH5 PHLPP1 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -DNAH5 DNAH11 4 10 4 658 65.8 1 7.744440925167086e-6 3.705835989581906e-5 5.11100992869609 -BCOR RYR1 2 12 10 652 10.866666666666667 1 0.02336718037607654 0.03293992630689731 1.631393689019353 -BCOR SMARCA4 2 12 10 652 10.866666666666667 1 0.02336718037607654 0.03293992630689731 1.631393689019353 -BCOR KMT2C 2 12 10 652 10.866666666666667 1 0.02336718037607654 0.03293992630689731 1.631393689019353 -BCOR OBSCN 2 12 9 653 12.092592592592593 1 0.019705639470874385 0.02833263891058817 1.70540946720965 -BCOR ABCA13 2 12 9 653 12.092592592592593 1 0.019705639470874385 0.02833263891058817 1.70540946720965 -BCOR SETD2 1 13 10 652 5.015384615384615 1 0.20700753962160068 0.25823241958906396 0.6840138363960979 -BCOR PDGFRA 1 13 10 652 5.015384615384615 1 0.20700753962160068 0.25823241958906396 0.6840138363960979 -BCOR PTPN11 1 13 10 652 5.015384615384615 1 0.20700753962160068 0.25823241958906396 0.6840138363960979 -BCOR DDX3X 0 14 11 651 0 -1 1 1 0 -BCOR RYR2 1 13 9 653 5.581196581196581 1 0.18998009415335282 0.24066764771236523 0.7212919014274136 -BCOR ATM 2 12 8 654 13.625 1 0.016315795809508062 0.02387915157305541 1.78739173847132 -BCOR DNAH14 2 12 8 654 13.625 1 0.016315795809508062 0.02387915157305541 1.78739173847132 -BCOR EGFR 4 10 6 656 43.733333333333334 1 2.2681636503525158e-5 8.820636418037561e-5 4.644325613852755 -BCOR LRP1B 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -BCOR PTEN 1 13 9 653 5.581196581196581 1 0.18998009415335282 0.24066764771236523 0.7212919014274136 -BCOR STAG2 1 13 9 653 5.581196581196581 1 0.18998009415335282 0.24066764771236523 0.7212919014274136 -BCOR PPM1D 3 11 7 655 25.51948051948052 1 7.816039851733126e-4 0.0015467930239698028 3.1070132349413218 -BCOR NEB 2 12 7 655 15.595238095238095 1 0.013208957444641097 0.01997650971566092 1.8791314589870862 -BCOR SYNE1 2 12 7 655 15.595238095238095 1 0.013208957444641097 0.01997650971566092 1.8791314589870862 -BCOR FSIP2 2 12 7 655 15.595238095238095 1 0.013208957444641097 0.01997650971566092 1.8791314589870862 -BCOR DNAH8 2 12 7 655 15.595238095238095 1 0.013208957444641097 0.01997650971566092 1.8791314589870862 -BCOR FBN2 3 11 6 656 29.818181818181817 1 5.53927280572376e-4 0.0011309348645019343 3.256547245594799 -BCOR APOB 2 12 7 655 15.595238095238095 1 0.013208957444641097 0.01997650971566092 1.8791314589870862 -BCOR IDH1 0 14 9 653 0 -1 1 1 0 -BCOR KDM6A 2 12 7 655 15.595238095238095 1 0.013208957444641097 0.01997650971566092 1.8791314589870862 -BCOR KRAS 0 14 9 653 0 -1 1 1 0 -BCOR PLEC 1 13 7 655 7.197802197802198 1 0.1549020302218208 0.1999525679891786 0.8099428901274583 -BCOR DNAH17 3 11 5 657 35.836363636363636 1 3.7387603840066767e-4 8.049176573652336e-4 3.4272723677525248 -BCOR FAT1 1 13 7 655 7.197802197802198 1 0.1549020302218208 0.1999525679891786 0.8099428901274583 -BCOR CCDC168 1 13 7 655 7.197802197802198 1 0.1549020302218208 0.1999525679891786 0.8099428901274583 -BCOR DNAH3 2 12 6 656 18.22222222222222 1 0.010396728519292487 0.01628643534032391 1.9831032962330368 -BCOR KIAA1549 1 13 7 655 7.197802197802198 1 0.1549020302218208 0.1999525679891786 0.8099428901274583 -BCOR PCLO 2 12 6 656 18.22222222222222 1 0.010396728519292487 0.01628643534032391 1.9831032962330368 -BCOR MAGEL2 1 13 7 655 7.197802197802198 1 0.1549020302218208 0.1999525679891786 0.8099428901274583 -BCOR PHLPP1 2 12 6 656 18.22222222222222 1 0.010396728519292487 0.01628643534032391 1.9831032962330368 -BCOR DNAH11 2 12 6 656 18.22222222222222 1 0.010396728519292487 0.01628643534032391 1.9831032962330368 -RYR1 SMARCA4 3 9 9 655 24.25925925925926 1 8.621954062300072e-4 0.001689902996210814 3.064394295393374 -RYR1 KMT2C 3 9 9 655 24.25925925925926 1 8.621954062300072e-4 0.001689902996210814 3.064394295393374 -RYR1 OBSCN 4 8 7 657 46.92857142857143 1 1.7710864261486374e-5 7.256123317833047e-5 4.7517602454256105 -RYR1 ABCA13 3 9 8 656 27.333333333333332 1 6.532245048602065e-4 0.0013118033089405785 3.184937531642123 -RYR1 SETD2 3 9 8 656 27.333333333333332 1 6.532245048602065e-4 0.0013118033089405785 3.184937531642123 -RYR1 PDGFRA 3 9 8 656 27.333333333333332 1 6.532245048602065e-4 0.0013118033089405785 3.184937531642123 -RYR1 PTPN11 2 10 9 655 14.555555555555555 1 0.014549789445952182 0.021630451542829394 1.8371432914287784 -RYR1 DDX3X 1 11 10 654 5.945454545454545 1 0.1800452446535022 0.22902951682299086 0.7446183447065617 -RYR1 RYR2 4 8 6 658 54.833333333333336 1 1.1379470581797978e-5 5.032437351156145e-5 4.943877942576462 -RYR1 ATM 5 7 5 659 94.14285714285714 1 1.6482113852022862e-7 3.154779604488751e-6 6.782987090248306 -RYR1 DNAH14 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -RYR1 EGFR 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -RYR1 LRP1B 4 8 6 658 54.833333333333336 1 1.1379470581797978e-5 5.032437351156145e-5 4.943877942576462 -RYR1 PTEN 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -RYR1 STAG2 2 10 8 656 16.4 1 0.012023141274844572 0.018479734079905396 1.9199820497959263 -RYR1 PPM1D 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -RYR1 NEB 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -RYR1 SYNE1 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -RYR1 FSIP2 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -RYR1 DNAH8 3 9 6 658 36.55555555555556 1 3.393456631896554e-4 7.655588165880807e-4 3.4693576966856776 -RYR1 FBN2 3 9 6 658 36.55555555555556 1 3.393456631896554e-4 7.655588165880807e-4 3.4693576966856776 -RYR1 APOB 3 9 6 658 36.55555555555556 1 3.393456631896554e-4 7.655588165880807e-4 3.4693576966856776 -RYR1 IDH1 0 12 9 655 0 -1 1 1 0 -RYR1 KDM6A 1 11 8 656 7.454545454545454 1 0.14970249707138242 0.19509102011962068 0.8247709554667159 -RYR1 KRAS 0 12 9 655 0 -1 1 1 0 -RYR1 PLEC 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -RYR1 DNAH17 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -RYR1 FAT1 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -RYR1 CCDC168 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -RYR1 DNAH3 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -RYR1 KIAA1549 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -RYR1 PCLO 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -RYR1 MAGEL2 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -RYR1 PHLPP1 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -RYR1 DNAH11 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -SMARCA4 KMT2C 3 9 9 655 24.25925925925926 1 8.621954062300072e-4 0.001689902996210814 3.064394295393374 -SMARCA4 OBSCN 4 8 7 657 46.92857142857143 1 1.7710864261486374e-5 7.256123317833047e-5 4.7517602454256105 -SMARCA4 ABCA13 4 8 7 657 46.92857142857143 1 1.7710864261486374e-5 7.256123317833047e-5 4.7517602454256105 -SMARCA4 SETD2 5 7 6 658 78.33333333333333 1 2.9953164234338547e-7 5.559488816221928e-6 6.523557292242122 -SMARCA4 PDGFRA 3 9 8 656 27.333333333333332 1 6.532245048602065e-4 0.0013118033089405785 3.184937531642123 -SMARCA4 PTPN11 2 10 9 655 14.555555555555555 1 0.014549789445952182 0.021630451542829394 1.8371432914287784 -SMARCA4 DDX3X 4 8 7 657 46.92857142857143 1 1.7710864261486374e-5 7.256123317833047e-5 4.7517602454256105 -SMARCA4 RYR2 5 7 5 659 94.14285714285714 1 1.6482113852022862e-7 3.154779604488751e-6 6.782987090248306 -SMARCA4 ATM 4 8 6 658 54.833333333333336 1 1.1379470581797978e-5 5.032437351156145e-5 4.943877942576462 -SMARCA4 DNAH14 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -SMARCA4 EGFR 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -SMARCA4 LRP1B 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -SMARCA4 PTEN 4 8 6 658 54.833333333333336 1 1.1379470581797978e-5 5.032437351156145e-5 4.943877942576462 -SMARCA4 STAG2 2 10 8 656 16.4 1 0.012023141274844572 0.018479734079905396 1.9199820497959263 -SMARCA4 PPM1D 2 10 8 656 16.4 1 0.012023141274844572 0.018479734079905396 1.9199820497959263 -SMARCA4 NEB 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -SMARCA4 SYNE1 5 7 4 660 117.85714285714286 1 8.313628673307695e-8 1.8186062722860582e-6 7.080209377079604 -SMARCA4 FSIP2 3 9 6 658 36.55555555555556 1 3.393456631896554e-4 7.655588165880807e-4 3.4693576966856776 -SMARCA4 DNAH8 3 9 6 658 36.55555555555556 1 3.393456631896554e-4 7.655588165880807e-4 3.4693576966856776 -SMARCA4 FBN2 3 9 6 658 36.55555555555556 1 3.393456631896554e-4 7.655588165880807e-4 3.4693576966856776 -SMARCA4 APOB 5 7 4 660 117.85714285714286 1 8.313628673307695e-8 1.8186062722860582e-6 7.080209377079604 -SMARCA4 IDH1 0 12 9 655 0 -1 1 1 0 -SMARCA4 KDM6A 3 9 6 658 36.55555555555556 1 3.393456631896554e-4 7.655588165880807e-4 3.4693576966856776 -SMARCA4 KRAS 0 12 9 655 0 -1 1 1 0 -SMARCA4 PLEC 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -SMARCA4 DNAH17 5 7 3 661 157.38095238095238 1 3.727450546874151e-8 1.0146948710935187e-6 7.428588109742745 -SMARCA4 FAT1 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -SMARCA4 CCDC168 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -SMARCA4 DNAH3 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -SMARCA4 KIAA1549 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -SMARCA4 PCLO 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -SMARCA4 MAGEL2 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -SMARCA4 PHLPP1 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -SMARCA4 DNAH11 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -KMT2C OBSCN 4 8 7 657 46.92857142857143 1 1.7710864261486374e-5 7.256123317833047e-5 4.7517602454256105 -KMT2C ABCA13 4 8 7 657 46.92857142857143 1 1.7710864261486374e-5 7.256123317833047e-5 4.7517602454256105 -KMT2C SETD2 4 8 7 657 46.92857142857143 1 1.7710864261486374e-5 7.256123317833047e-5 4.7517602454256105 -KMT2C PDGFRA 3 9 8 656 27.333333333333332 1 6.532245048602065e-4 0.0013118033089405785 3.184937531642123 -KMT2C PTPN11 2 10 9 655 14.555555555555555 1 0.014549789445952182 0.021630451542829394 1.8371432914287784 -KMT2C DDX3X 2 10 9 655 14.555555555555555 1 0.014549789445952182 0.021630451542829394 1.8371432914287784 -KMT2C RYR2 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -KMT2C ATM 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -KMT2C DNAH14 4 8 6 658 54.833333333333336 1 1.1379470581797978e-5 5.032437351156145e-5 4.943877942576462 -KMT2C EGFR 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -KMT2C LRP1B 4 8 6 658 54.833333333333336 1 1.1379470581797978e-5 5.032437351156145e-5 4.943877942576462 -KMT2C PTEN 3 9 7 657 31.285714285714285 1 4.7990260287873607e-4 9.94721977202118e-4 3.3188468945501652 -KMT2C STAG2 2 10 8 656 16.4 1 0.012023141274844572 0.018479734079905396 1.9199820497959263 -KMT2C PPM1D 2 10 8 656 16.4 1 0.012023141274844572 0.018479734079905396 1.9199820497959263 -KMT2C NEB 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -KMT2C SYNE1 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -KMT2C FSIP2 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -KMT2C DNAH8 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -KMT2C FBN2 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -KMT2C APOB 4 8 5 659 65.9 1 6.89361080448692e-6 3.548182031721209e-5 5.161553239383974 -KMT2C IDH1 0 12 9 655 0 -1 1 1 0 -KMT2C KDM6A 1 11 8 656 7.454545454545454 1 0.14970249707138242 0.19509102011962068 0.8247709554667159 -KMT2C KRAS 0 12 9 655 0 -1 1 1 0 -KMT2C PLEC 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -KMT2C DNAH17 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -KMT2C FAT1 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -KMT2C CCDC168 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -KMT2C DNAH3 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -KMT2C KIAA1549 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -KMT2C PCLO 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -KMT2C MAGEL2 3 9 5 659 43.93333333333333 1 2.2852831239459804e-4 5.510771312665012e-4 3.6410599874757907 -KMT2C PHLPP1 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -KMT2C DNAH11 4 8 4 660 82.5 1 3.866733241040751e-6 2.2993923399392816e-5 5.412655788087296 -OBSCN ABCA13 5 6 6 659 91.52777777777777 1 1.7604701383882547e-7 3.31780910696248e-6 6.754371337161926 -OBSCN SETD2 4 7 7 658 53.714285714285715 1 1.1907086721772056e-5 5.190811827107035e-5 4.9241944833052385 -OBSCN PDGFRA 6 5 5 660 158.4 1 1.5945265281344704e-9 1.7757227245133876e-7 8.797368251004542 -OBSCN PTPN11 3 8 8 657 30.796875 1 4.943460947105256e-4 0.0010194847912801243 3.305968892381448 -OBSCN DDX3X 2 9 9 656 16.19753086419753 1 0.012233695289103534 0.018686130584977343 1.9124423408979643 -OBSCN RYR2 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -OBSCN ATM 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -OBSCN DNAH14 5 6 5 660 110 1 9.675042869760254e-8 2.0088012738061543e-6 7.01434710196186 -OBSCN EGFR 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -OBSCN LRP1B 5 6 5 660 110 1 9.675042869760254e-8 2.0088012738061543e-6 7.01434710196186 -OBSCN PTEN 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -OBSCN STAG2 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -OBSCN PPM1D 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -OBSCN NEB 7 4 2 663 580.125 1 9.475365893611954e-13 5.803661609837322e-10 12.02340401064659 -OBSCN SYNE1 6 5 3 662 264.8 1 2.9367428282501325e-10 3.597509964606412e-8 9.532134083154428 -OBSCN FSIP2 6 5 3 662 264.8 1 2.9367428282501325e-10 3.597509964606412e-8 9.532134083154428 -OBSCN DNAH8 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -OBSCN FBN2 5 6 4 661 137.70833333333334 1 4.873995078482534e-8 1.194128794228221e-6 7.312114913680009 -OBSCN APOB 6 5 3 662 264.8 1 2.9367428282501325e-10 3.597509964606412e-8 9.532134083154428 -OBSCN IDH1 0 11 9 656 0 -1 1 1 0 -OBSCN KDM6A 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -OBSCN KRAS 0 11 9 656 0 -1 1 1 0 -OBSCN PLEC 5 6 3 662 183.88888888888889 1 2.182535272815865e-8 6.855399254357524e-7 7.661038728760764 -OBSCN DNAH17 5 6 3 662 183.88888888888889 1 2.182535272815865e-8 6.855399254357524e-7 7.661038728760764 -OBSCN FAT1 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -OBSCN CCDC168 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -OBSCN DNAH3 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -OBSCN KIAA1549 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -OBSCN PCLO 5 6 3 662 183.88888888888889 1 2.182535272815865e-8 6.855399254357524e-7 7.661038728760764 -OBSCN MAGEL2 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -OBSCN PHLPP1 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -OBSCN DNAH11 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -ABCA13 SETD2 4 7 7 658 53.714285714285715 1 1.1907086721772056e-5 5.190811827107035e-5 4.9241944833052385 -ABCA13 PDGFRA 3 8 8 657 30.796875 1 4.943460947105256e-4 0.0010194847912801243 3.305968892381448 -ABCA13 PTPN11 2 9 9 656 16.19753086419753 1 0.012233695289103534 0.018686130584977343 1.9124423408979643 -ABCA13 DDX3X 2 9 9 656 16.19753086419753 1 0.012233695289103534 0.018686130584977343 1.9124423408979643 -ABCA13 RYR2 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -ABCA13 ATM 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -ABCA13 DNAH14 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -ABCA13 EGFR 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -ABCA13 LRP1B 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -ABCA13 PTEN 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -ABCA13 STAG2 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -ABCA13 PPM1D 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -ABCA13 NEB 5 6 4 661 137.70833333333334 1 4.873995078482534e-8 1.194128794228221e-6 7.312114913680009 -ABCA13 SYNE1 5 6 4 661 137.70833333333334 1 4.873995078482534e-8 1.194128794228221e-6 7.312114913680009 -ABCA13 FSIP2 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -ABCA13 DNAH8 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -ABCA13 FBN2 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -ABCA13 APOB 5 6 4 661 137.70833333333334 1 4.873995078482534e-8 1.194128794228221e-6 7.312114913680009 -ABCA13 IDH1 0 11 9 656 0 -1 1 1 0 -ABCA13 KDM6A 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -ABCA13 KRAS 0 11 9 656 0 -1 1 1 0 -ABCA13 PLEC 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -ABCA13 DNAH17 5 6 3 662 183.88888888888889 1 2.182535272815865e-8 6.855399254357524e-7 7.661038728760764 -ABCA13 FAT1 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -ABCA13 CCDC168 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -ABCA13 DNAH3 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -ABCA13 KIAA1549 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -ABCA13 PCLO 5 6 3 662 183.88888888888889 1 2.182535272815865e-8 6.855399254357524e-7 7.661038728760764 -ABCA13 MAGEL2 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -ABCA13 PHLPP1 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -ABCA13 DNAH11 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -SETD2 PDGFRA 3 8 8 657 30.796875 1 4.943460947105256e-4 0.0010194847912801243 3.305968892381448 -SETD2 PTPN11 2 9 9 656 16.19753086419753 1 0.012233695289103534 0.018686130584977343 1.9124423408979643 -SETD2 DDX3X 2 9 9 656 16.19753086419753 1 0.012233695289103534 0.018686130584977343 1.9124423408979643 -SETD2 RYR2 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -SETD2 ATM 4 7 6 659 62.76190476190476 1 7.641254100705431e-6 3.705835989581906e-5 5.116835358136465 -SETD2 DNAH14 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -SETD2 EGFR 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -SETD2 LRP1B 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -SETD2 PTEN 5 6 5 660 110 1 9.675042869760254e-8 2.0088012738061543e-6 7.01434710196186 -SETD2 STAG2 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -SETD2 PPM1D 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -SETD2 NEB 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -SETD2 SYNE1 5 6 4 661 137.70833333333334 1 4.873995078482534e-8 1.194128794228221e-6 7.312114913680009 -SETD2 FSIP2 3 8 6 659 41.1875 1 2.562326500933625e-4 6.094854298337263e-4 3.591365531687645 -SETD2 DNAH8 3 8 6 659 41.1875 1 2.562326500933625e-4 6.094854298337263e-4 3.591365531687645 -SETD2 FBN2 3 8 6 659 41.1875 1 2.562326500933625e-4 6.094854298337263e-4 3.591365531687645 -SETD2 APOB 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -SETD2 IDH1 0 11 9 656 0 -1 1 1 0 -SETD2 KDM6A 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -SETD2 KRAS 0 11 9 656 0 -1 1 1 0 -SETD2 PLEC 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -SETD2 DNAH17 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -SETD2 FAT1 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -SETD2 CCDC168 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -SETD2 DNAH3 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -SETD2 KIAA1549 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -SETD2 PCLO 4 7 4 661 94.42857142857143 1 2.5902469958500875e-6 1.8131728970950613e-5 5.586658821316351 -SETD2 MAGEL2 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -SETD2 PHLPP1 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -SETD2 DNAH11 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA PTPN11 4 7 7 658 53.714285714285715 1 1.1907086721772056e-5 5.190811827107035e-5 4.9241944833052385 -PDGFRA DDX3X 1 10 10 655 6.55 1 0.16625395671953969 0.2141546761108687 0.779228010018757 -PDGFRA RYR2 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -PDGFRA ATM 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -PDGFRA DNAH14 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -PDGFRA EGFR 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -PDGFRA LRP1B 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -PDGFRA PTEN 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -PDGFRA STAG2 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PDGFRA PPM1D 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PDGFRA NEB 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -PDGFRA SYNE1 3 8 6 659 41.1875 1 2.562326500933625e-4 6.094854298337263e-4 3.591365531687645 -PDGFRA FSIP2 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -PDGFRA DNAH8 3 8 6 659 41.1875 1 2.562326500933625e-4 6.094854298337263e-4 3.591365531687645 -PDGFRA FBN2 3 8 6 659 41.1875 1 2.562326500933625e-4 6.094854298337263e-4 3.591365531687645 -PDGFRA APOB 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -PDGFRA IDH1 0 11 9 656 0 -1 1 1 0 -PDGFRA KDM6A 1 10 8 657 8.2125 1 0.13803683011047158 0.18046437234293242 0.8600050224415277 -PDGFRA KRAS 0 11 9 656 0 -1 1 1 0 -PDGFRA PLEC 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA DNAH17 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA FAT1 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA CCDC168 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA DNAH3 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA KIAA1549 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA PCLO 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA MAGEL2 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA PHLPP1 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PDGFRA DNAH11 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -PTPN11 DDX3X 0 11 11 654 0 -1 1 1 0 -PTPN11 RYR2 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 ATM 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 DNAH14 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 EGFR 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 LRP1B 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 PTEN 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 STAG2 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 PPM1D 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -PTPN11 NEB 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -PTPN11 SYNE1 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -PTPN11 FSIP2 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -PTPN11 DNAH8 3 8 6 659 41.1875 1 2.562326500933625e-4 6.094854298337263e-4 3.591365531687645 -PTPN11 FBN2 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -PTPN11 APOB 4 7 5 660 75.42857142857143 1 4.623452631902295e-6 2.622096978740885e-5 5.335033587436913 -PTPN11 IDH1 0 11 9 656 0 -1 1 1 0 -PTPN11 KDM6A 1 10 8 657 8.2125 1 0.13803683011047158 0.18046437234293242 0.8600050224415277 -PTPN11 KRAS 0 11 9 656 0 -1 1 1 0 -PTPN11 PLEC 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 DNAH17 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 FAT1 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 CCDC168 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 DNAH3 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 KIAA1549 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 PCLO 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 MAGEL2 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 PHLPP1 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -PTPN11 DNAH11 3 8 5 660 49.5 1 1.7236291760620918e-4 4.482899661732617e-4 3.7635561631706227 -DDX3X RYR2 3 8 7 658 35.25 1 3.6277181980450115e-4 7.978374852073858e-4 3.4403664563934657 -DDX3X ATM 2 9 8 657 18.25 1 0.010099268162850263 0.015901803983922328 1.9957100959551082 -DDX3X DNAH14 1 10 9 656 7.288888888888889 1 0.15225211477131823 0.19757292435896698 0.8174366663329493 -DDX3X EGFR 1 10 9 656 7.288888888888889 1 0.15225211477131823 0.19757292435896698 0.8174366663329493 -DDX3X LRP1B 1 10 9 656 7.288888888888889 1 0.15225211477131823 0.19757292435896698 0.8174366663329493 -DDX3X PTEN 1 10 9 656 7.288888888888889 1 0.15225211477131823 0.19757292435896698 0.8174366663329493 -DDX3X STAG2 0 11 10 655 0 -1 1 1 0 -DDX3X PPM1D 0 11 10 655 0 -1 1 1 0 -DDX3X NEB 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -DDX3X SYNE1 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -DDX3X FSIP2 1 10 8 657 8.2125 1 0.13803683011047158 0.18046437234293242 0.8600050224415277 -DDX3X DNAH8 1 10 8 657 8.2125 1 0.13803683011047158 0.18046437234293242 0.8600050224415277 -DDX3X FBN2 1 10 8 657 8.2125 1 0.13803683011047158 0.18046437234293242 0.8600050224415277 -DDX3X APOB 2 9 7 658 20.88888888888889 1 0.0081519688942411 0.0133862759992565 2.088737486151436 -DDX3X IDH1 0 11 9 656 0 -1 1 1 0 -DDX3X KDM6A 1 10 8 657 8.2125 1 0.13803683011047158 0.18046437234293242 0.8600050224415277 -DDX3X KRAS 0 11 9 656 0 -1 1 1 0 -DDX3X PLEC 1 10 7 658 9.4 1 0.12360517886422358 0.1640480434546846 0.9079633326045153 -DDX3X DNAH17 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -DDX3X FAT1 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -DDX3X CCDC168 1 10 7 658 9.4 1 0.12360517886422358 0.1640480434546846 0.9079633326045153 -DDX3X DNAH3 1 10 7 658 9.4 1 0.12360517886422358 0.1640480434546846 0.9079633326045153 -DDX3X KIAA1549 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -DDX3X PCLO 2 9 6 659 24.40740740740741 1 0.006397360839986054 0.010884398651365161 2.1939991524252993 -DDX3X MAGEL2 1 10 7 658 9.4 1 0.12360517886422358 0.1640480434546846 0.9079633326045153 -DDX3X PHLPP1 1 10 7 658 9.4 1 0.12360517886422358 0.1640480434546846 0.9079633326045153 -DDX3X DNAH11 1 10 7 658 9.4 1 0.12360517886422358 0.1640480434546846 0.9079633326045153 -RYR2 ATM 4 6 6 660 73.33333333333333 1 4.8977982199753054e-6 2.7396359906254562e-5 5.309999110954137 -RYR2 DNAH14 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -RYR2 EGFR 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -RYR2 LRP1B 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -RYR2 PTEN 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -RYR2 STAG2 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -RYR2 PPM1D 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -RYR2 NEB 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -RYR2 SYNE1 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -RYR2 FSIP2 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -RYR2 DNAH8 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -RYR2 FBN2 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -RYR2 APOB 5 5 4 662 165.5 1 2.671891601118892e-8 7.438789116751461e-7 7.573181165205046 -RYR2 IDH1 0 10 9 657 0 -1 1 1 0 -RYR2 KDM6A 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -RYR2 KRAS 1 9 8 658 9.13888888888889 1 0.12622911545445062 0.1664485106907449 0.8988404610759534 -RYR2 PLEC 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -RYR2 DNAH17 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -RYR2 FAT1 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -RYR2 CCDC168 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -RYR2 DNAH3 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -RYR2 KIAA1549 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -RYR2 PCLO 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -RYR2 MAGEL2 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -RYR2 PHLPP1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -RYR2 DNAH11 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -ATM DNAH14 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -ATM EGFR 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -ATM LRP1B 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -ATM PTEN 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -ATM STAG2 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -ATM PPM1D 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -ATM NEB 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -ATM SYNE1 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -ATM FSIP2 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -ATM DNAH8 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -ATM FBN2 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -ATM APOB 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -ATM IDH1 0 10 9 657 0 -1 1 1 0 -ATM KDM6A 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -ATM KRAS 0 10 9 657 0 -1 1 1 0 -ATM PLEC 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -ATM DNAH17 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -ATM FAT1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -ATM CCDC168 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -ATM DNAH3 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -ATM KIAA1549 5 5 3 663 221 1 1.1949521087480983e-8 5.13981694072449e-7 7.922649500007237 -ATM PCLO 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -ATM MAGEL2 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -ATM PHLPP1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -ATM DNAH11 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -DNAH14 EGFR 4 6 6 660 73.33333333333333 1 4.8977982199753054e-6 2.7396359906254562e-5 5.309999110954137 -DNAH14 LRP1B 5 5 5 661 132.2 1 5.310453968598687e-8 1.2755502179477238e-6 7.274868351304576 -DNAH14 PTEN 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -DNAH14 STAG2 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -DNAH14 PPM1D 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -DNAH14 NEB 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -DNAH14 SYNE1 5 5 4 662 165.5 1 2.671891601118892e-8 7.438789116751461e-7 7.573181165205046 -DNAH14 FSIP2 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -DNAH14 DNAH8 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -DNAH14 FBN2 5 5 4 662 165.5 1 2.671891601118892e-8 7.438789116751461e-7 7.573181165205046 -DNAH14 APOB 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -DNAH14 IDH1 0 10 9 657 0 -1 1 1 0 -DNAH14 KDM6A 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -DNAH14 KRAS 0 10 9 657 0 -1 1 1 0 -DNAH14 PLEC 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -DNAH14 DNAH17 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -DNAH14 FAT1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -DNAH14 CCDC168 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -DNAH14 DNAH3 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -DNAH14 KIAA1549 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -DNAH14 PCLO 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -DNAH14 MAGEL2 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -DNAH14 PHLPP1 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -DNAH14 DNAH11 5 5 3 663 221 1 1.1949521087480983e-8 5.13981694072449e-7 7.922649500007237 -EGFR LRP1B 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -EGFR PTEN 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -EGFR STAG2 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -EGFR PPM1D 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -EGFR NEB 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -EGFR SYNE1 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -EGFR FSIP2 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -EGFR DNAH8 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -EGFR FBN2 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -EGFR APOB 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -EGFR IDH1 0 10 9 657 0 -1 1 1 0 -EGFR KDM6A 1 9 8 658 9.13888888888889 1 0.12622911545445062 0.1664485106907449 0.8988404610759534 -EGFR KRAS 0 10 9 657 0 -1 1 1 0 -EGFR PLEC 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -EGFR DNAH17 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -EGFR FAT1 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -EGFR CCDC168 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -EGFR DNAH3 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -EGFR KIAA1549 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -EGFR PCLO 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -EGFR MAGEL2 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -EGFR PHLPP1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -EGFR DNAH11 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -LRP1B PTEN 3 7 7 659 40.3469387755102 1 2.659180291580118e-4 6.169499729518267e-4 3.575252216642117 -LRP1B STAG2 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -LRP1B PPM1D 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -LRP1B NEB 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -LRP1B SYNE1 6 4 3 663 331.5 1 1.340051485146573e-10 2.345090099006503e-8 9.872878515601224 -LRP1B FSIP2 5 5 4 662 165.5 1 2.671891601118892e-8 7.438789116751461e-7 7.573181165205046 -LRP1B DNAH8 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -LRP1B FBN2 5 5 4 662 165.5 1 2.671891601118892e-8 7.438789116751461e-7 7.573181165205046 -LRP1B APOB 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -LRP1B IDH1 0 10 9 657 0 -1 1 1 0 -LRP1B KDM6A 1 9 8 658 9.13888888888889 1 0.12622911545445062 0.1664485106907449 0.8988404610759534 -LRP1B KRAS 0 10 9 657 0 -1 1 1 0 -LRP1B PLEC 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -LRP1B DNAH17 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -LRP1B FAT1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -LRP1B CCDC168 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -LRP1B DNAH3 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -LRP1B KIAA1549 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -LRP1B PCLO 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -LRP1B MAGEL2 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -LRP1B PHLPP1 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -LRP1B DNAH11 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -PTEN STAG2 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -PTEN PPM1D 4 6 6 660 73.33333333333333 1 4.8977982199753054e-6 2.7396359906254562e-5 5.309999110954137 -PTEN NEB 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -PTEN SYNE1 4 6 5 661 88.13333333333334 1 2.9599207478595786e-6 1.9083699558568337e-5 5.528719917058643 -PTEN FSIP2 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -PTEN DNAH8 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -PTEN FBN2 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -PTEN APOB 3 7 6 660 47.142857142857146 1 1.8761195987660058e-4 4.708308860211999e-4 3.7267394796944195 -PTEN IDH1 0 10 9 657 0 -1 1 1 0 -PTEN KDM6A 1 9 8 658 9.13888888888889 1 0.12622911545445062 0.1664485106907449 0.8988404610759534 -PTEN KRAS 0 10 9 657 0 -1 1 1 0 -PTEN PLEC 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PTEN DNAH17 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -PTEN FAT1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PTEN CCDC168 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -PTEN DNAH3 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PTEN KIAA1549 4 6 4 662 110.33333333333333 1 1.656275489260294e-6 1.3617030029153425e-5 5.78086742509049 -PTEN PCLO 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PTEN MAGEL2 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PTEN PHLPP1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PTEN DNAH11 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -STAG2 PPM1D 2 8 8 658 20.5625 1 0.008328996100478306 0.013478230149386957 2.0794073412458616 -STAG2 NEB 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -STAG2 SYNE1 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -STAG2 FSIP2 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -STAG2 DNAH8 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -STAG2 FBN2 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -STAG2 APOB 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -STAG2 IDH1 0 10 9 657 0 -1 1 1 0 -STAG2 KDM6A 1 9 8 658 9.13888888888889 1 0.12622911545445062 0.1664485106907449 0.8988404610759534 -STAG2 KRAS 0 10 9 657 0 -1 1 1 0 -STAG2 PLEC 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 DNAH17 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 FAT1 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 CCDC168 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 DNAH3 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 KIAA1549 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 PCLO 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 MAGEL2 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 PHLPP1 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -STAG2 DNAH11 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D NEB 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -PPM1D SYNE1 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -PPM1D FSIP2 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -PPM1D DNAH8 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -PPM1D FBN2 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -PPM1D APOB 2 8 7 659 23.535714285714285 1 0.00671638048621424 0.011193967477023734 2.1728647088438984 -PPM1D IDH1 0 10 9 657 0 -1 1 1 0 -PPM1D KDM6A 1 9 8 658 9.13888888888889 1 0.12622911545445062 0.1664485106907449 0.8988404610759534 -PPM1D KRAS 0 10 9 657 0 -1 1 1 0 -PPM1D PLEC 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D DNAH17 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PPM1D FAT1 3 7 5 661 56.65714285714286 1 1.2606128016702064e-4 3.5017022268616846e-4 3.8994182868768323 -PPM1D CCDC168 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D DNAH3 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D KIAA1549 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D PCLO 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D MAGEL2 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D PHLPP1 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -PPM1D DNAH11 2 8 6 660 27.5 1 0.0052655430359169865 0.009201555233949084 2.2785568333406347 -NEB SYNE1 5 4 4 663 207.1875 1 1.342646057985173e-8 5.13981694072449e-7 7.872038458904623 -NEB FSIP2 6 3 3 664 442.6666666666667 1 5.380933897416207e-11 1.0986073373891422e-8 10.269142343051762 -NEB DNAH8 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -NEB FBN2 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -NEB APOB 5 4 4 663 207.1875 1 1.342646057985173e-8 5.13981694072449e-7 7.872038458904623 -NEB IDH1 0 9 9 658 0 -1 1 1 0 -NEB KDM6A 2 7 7 660 26.93877551020408 1 0.005410626780946708 0.009414798020823463 2.2667524221874604 -NEB KRAS 0 9 9 658 0 -1 1 1 0 -NEB PLEC 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -NEB DNAH17 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -NEB FAT1 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -NEB CCDC168 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -NEB DNAH3 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -NEB KIAA1549 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -NEB PCLO 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -NEB MAGEL2 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -NEB PHLPP1 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -NEB DNAH11 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -SYNE1 FSIP2 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -SYNE1 DNAH8 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -SYNE1 FBN2 5 4 4 663 207.1875 1 1.342646057985173e-8 5.13981694072449e-7 7.872038458904623 -SYNE1 APOB 5 4 4 663 207.1875 1 1.342646057985173e-8 5.13981694072449e-7 7.872038458904623 -SYNE1 IDH1 0 9 9 658 0 -1 1 1 0 -SYNE1 KDM6A 2 7 7 660 26.93877551020408 1 0.005410626780946708 0.009414798020823463 2.2667524221874604 -SYNE1 KRAS 0 9 9 658 0 -1 1 1 0 -SYNE1 PLEC 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -SYNE1 DNAH17 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -SYNE1 FAT1 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -SYNE1 CCDC168 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -SYNE1 DNAH3 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -SYNE1 KIAA1549 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -SYNE1 PCLO 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -SYNE1 MAGEL2 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -SYNE1 PHLPP1 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -SYNE1 DNAH11 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FSIP2 DNAH8 5 4 4 663 207.1875 1 1.342646057985173e-8 5.13981694072449e-7 7.872038458904623 -FSIP2 FBN2 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -FSIP2 APOB 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -FSIP2 IDH1 0 9 9 658 0 -1 1 1 0 -FSIP2 KDM6A 1 8 8 659 10.296875 1 0.114277841957627 0.15266123925637193 0.9420379695033619 -FSIP2 KRAS 0 9 9 658 0 -1 1 1 0 -FSIP2 PLEC 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FSIP2 DNAH17 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FSIP2 FAT1 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -FSIP2 CCDC168 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -FSIP2 DNAH3 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FSIP2 KIAA1549 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -FSIP2 PCLO 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FSIP2 MAGEL2 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FSIP2 PHLPP1 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FSIP2 DNAH11 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -DNAH8 FBN2 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -DNAH8 APOB 5 4 4 663 207.1875 1 1.342646057985173e-8 5.13981694072449e-7 7.872038458904623 -DNAH8 IDH1 0 9 9 658 0 -1 1 1 0 -DNAH8 KDM6A 1 8 8 659 10.296875 1 0.114277841957627 0.15266123925637193 0.9420379695033619 -DNAH8 KRAS 0 9 9 658 0 -1 1 1 0 -DNAH8 PLEC 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -DNAH8 DNAH17 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -DNAH8 FAT1 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -DNAH8 CCDC168 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -DNAH8 DNAH3 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -DNAH8 KIAA1549 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -DNAH8 PCLO 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -DNAH8 MAGEL2 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -DNAH8 PHLPP1 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -DNAH8 DNAH11 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FBN2 APOB 4 5 5 662 105.92 1 1.7866400151202244e-6 1.394034406702086e-5 5.747962943407051 -FBN2 IDH1 0 9 9 658 0 -1 1 1 0 -FBN2 KDM6A 1 8 8 659 10.296875 1 0.114277841957627 0.15266123925637193 0.9420379695033619 -FBN2 KRAS 0 9 9 658 0 -1 1 1 0 -FBN2 PLEC 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FBN2 DNAH17 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FBN2 FAT1 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -FBN2 CCDC168 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -FBN2 DNAH3 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FBN2 KIAA1549 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -FBN2 PCLO 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FBN2 MAGEL2 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FBN2 PHLPP1 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -FBN2 DNAH11 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -APOB IDH1 0 9 9 658 0 -1 1 1 0 -APOB KDM6A 2 7 7 660 26.93877551020408 1 0.005410626780946708 0.009414798020823463 2.2667524221874604 -APOB KRAS 0 9 9 658 0 -1 1 1 0 -APOB PLEC 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -APOB DNAH17 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -APOB FAT1 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -APOB CCDC168 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -APOB DNAH3 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -APOB KIAA1549 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -APOB PCLO 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -APOB MAGEL2 3 6 5 662 66.2 1 8.873977876369213e-5 2.738192165882188e-4 4.051881658353603 -APOB PHLPP1 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -APOB DNAH11 5 4 3 664 276.6666666666667 1 5.997209890475309e-9 3.194166137318371e-7 8.222050751449014 -IDH1 KDM6A 0 9 9 658 0 -1 1 1 0 -IDH1 KRAS 1 8 8 659 10.296875 1 0.114277841957627 0.15266123925637193 0.9420379695033619 -IDH1 PLEC 0 9 8 659 0 -1 1 1 0 -IDH1 DNAH17 0 9 8 659 0 -1 1 1 0 -IDH1 FAT1 0 9 8 659 0 -1 1 1 0 -IDH1 CCDC168 0 9 8 659 0 -1 1 1 0 -IDH1 DNAH3 0 9 8 659 0 -1 1 1 0 -IDH1 KIAA1549 0 9 8 659 0 -1 1 1 0 -IDH1 PCLO 0 9 8 659 0 -1 1 1 0 -IDH1 MAGEL2 0 9 8 659 0 -1 1 1 0 -IDH1 PHLPP1 0 9 8 659 0 -1 1 1 0 -IDH1 DNAH11 0 9 8 659 0 -1 1 1 0 -KDM6A KRAS 0 9 9 658 0 -1 1 1 0 -KDM6A PLEC 1 8 7 660 11.785714285714286 1 0.10218148471577346 0.13710002056607062 0.9906277912291808 -KDM6A DNAH17 4 5 4 663 132.6 1 9.985451019911671e-7 1.0279140755791426e-5 6.000632314264968 -KDM6A FAT1 1 8 7 660 11.785714285714286 1 0.10218148471577346 0.13710002056607062 0.9906277912291808 -KDM6A CCDC168 1 8 7 660 11.785714285714286 1 0.10218148471577346 0.13710002056607062 0.9906277912291808 -KDM6A DNAH3 1 8 7 660 11.785714285714286 1 0.10218148471577346 0.13710002056607062 0.9906277912291808 -KDM6A KIAA1549 2 7 6 661 31.476190476190474 1 0.004237646684766995 0.0076339958659405426 2.372875255565895 -KDM6A PCLO 2 7 6 661 31.476190476190474 1 0.004237646684766995 0.0076339958659405426 2.372875255565895 -KDM6A MAGEL2 1 8 7 660 11.785714285714286 1 0.10218148471577346 0.13710002056607062 0.9906277912291808 -KDM6A PHLPP1 1 8 7 660 11.785714285714286 1 0.10218148471577346 0.13710002056607062 0.9906277912291808 -KDM6A DNAH11 2 7 6 661 31.476190476190474 1 0.004237646684766995 0.0076339958659405426 2.372875255565895 -KRAS PLEC 0 9 8 659 0 -1 1 1 0 -KRAS DNAH17 0 9 8 659 0 -1 1 1 0 -KRAS FAT1 0 9 8 659 0 -1 1 1 0 -KRAS CCDC168 0 9 8 659 0 -1 1 1 0 -KRAS DNAH3 0 9 8 659 0 -1 1 1 0 -KRAS KIAA1549 0 9 8 659 0 -1 1 1 0 -KRAS PCLO 0 9 8 659 0 -1 1 1 0 -KRAS MAGEL2 0 9 8 659 0 -1 1 1 0 -KRAS PHLPP1 0 9 8 659 0 -1 1 1 0 -KRAS DNAH11 0 9 8 659 0 -1 1 1 0 -PLEC DNAH17 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PLEC FAT1 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PLEC CCDC168 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PLEC DNAH3 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PLEC KIAA1549 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PLEC PCLO 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PLEC MAGEL2 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -PLEC PHLPP1 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PLEC DNAH11 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -DNAH17 FAT1 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -DNAH17 CCDC168 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -DNAH17 DNAH3 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -DNAH17 KIAA1549 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -DNAH17 PCLO 5 3 3 665 369.44444444444446 1 2.6754297964301586e-9 2.5210780774053416e-7 8.572606440474816 -DNAH17 MAGEL2 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -DNAH17 PHLPP1 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -DNAH17 DNAH11 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -FAT1 CCDC168 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -FAT1 DNAH3 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -FAT1 KIAA1549 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -FAT1 PCLO 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -FAT1 MAGEL2 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -FAT1 PHLPP1 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -FAT1 DNAH11 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -CCDC168 DNAH3 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -CCDC168 KIAA1549 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -CCDC168 PCLO 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -CCDC168 MAGEL2 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -CCDC168 PHLPP1 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -CCDC168 DNAH11 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -DNAH3 KIAA1549 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -DNAH3 PCLO 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -DNAH3 MAGEL2 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -DNAH3 PHLPP1 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -DNAH3 DNAH11 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -KIAA1549 PCLO 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -KIAA1549 MAGEL2 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -KIAA1549 PHLPP1 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -KIAA1549 DNAH11 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PCLO MAGEL2 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PCLO PHLPP1 5 3 3 665 369.44444444444446 1 2.6754297964301586e-9 2.5210780774053416e-7 8.572606440474816 -PCLO DNAH11 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 -MAGEL2 PHLPP1 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -MAGEL2 DNAH11 3 5 5 663 79.56 1 5.949270087645866e-5 1.9966728376345715e-4 4.225536314330771 -PHLPP1 DNAH11 4 4 4 664 166 1 5.5741270550197e-7 8.336416950759703e-6 6.2538231363286565 +TP53 BRAF 2 53 48 570 0.4481132075471698 -1 0.4179928356983266 0.4897039775103928 -0.37883116186933746 +TP53 H3F3A 25 30 15 603 33.5 1 3.023011908825577e-20 3.7031895883113315e-17 19.519560141963087 +TP53 CTNNB1 5 50 30 588 1.96 1 0.19515259665462803 0.24468979621486114 0.7096256657238865 +TP53 NF1 10 45 15 603 8.933333333333334 1 7.446947658034257e-6 4.09081205430133e-5 5.128021698648477 +TP53 ATRX 14 41 9 609 23.10569105691057 1 5.2912592131635233e-11 1.2963585072250633e-8 10.276440962321837 +TP53 FGFR1 3 52 13 605 2.68491124260355 1 0.1352985098757194 0.17821577913737233 0.8687069865237085 +TP53 NF2 1 54 15 603 0.7444444444444445 -1 1 1 0 +TP53 PIK3CA 4 51 11 607 4.327985739750446 1 0.02766414184143541 0.03899720800432494 1.5580827973207751 +TP53 KMT2D 5 50 9 609 6.766666666666667 1 0.0034472170994394946 0.006506688669974393 2.462531364657157 +TP53 BCOR 1 54 13 605 0.8618233618233618 -1 0.9999999999999999 1 -4.8216373327664354e-17 +TP53 SMARCA4 4 51 8 610 5.980392156862745 1 0.012080486342408847 0.018249071168895573 1.9179155813131648 +TP53 KMT2C 4 51 8 610 5.980392156862745 1 0.012080486342408847 0.018249071168895573 1.9179155813131648 +TP53 SETD2 5 50 6 612 10.2 1 9.64070998706312e-4 0.0019617723810884257 3.0158909814385044 +TP53 PDGFRA 5 50 6 612 10.2 1 9.64070998706312e-4 0.0019617723810884257 3.0158909814385044 +TP53 PTPN11 4 51 7 611 6.84593837535014 1 0.00857034175584438 0.013795885218014935 2.0670018595566106 +TP53 DDX3X 4 51 7 611 6.84593837535014 1 0.00857034175584438 0.013795885218014935 2.0670018595566106 +TP53 RYR2 6 49 4 614 18.79591836734694 1 3.7191878142609244e-5 1.393894781347073e-4 4.429551889767513 +TP53 ATM 5 50 5 613 12.26 1 5.607081555247501e-4 0.0011691492830220177 3.251263127023251 +TP53 DNAH14 6 49 4 614 18.79591836734694 1 3.7191878142609244e-5 1.393894781347073e-4 4.429551889767513 +TP53 EGFR 6 49 4 614 18.79591836734694 1 3.7191878142609244e-5 1.393894781347073e-4 4.429551889767513 +TP53 LRP1B 4 51 6 612 8 1 0.0058044251168850895 0.009916904837077037 2.2362407872825134 +TP53 PTEN 5 50 5 613 12.26 1 5.607081555247501e-4 0.0011691492830220177 3.251263127023251 +TP53 STAG2 2 53 8 610 2.8773584905660377 1 0.19352633936257377 0.24289935012208286 0.7132599181833229 +TP53 PPM1D 2 53 8 610 2.8773584905660377 1 0.19352633936257377 0.24289935012208286 0.7132599181833229 +TP53 FSIP2 4 51 5 613 9.615686274509804 1 0.0037069383323409563 0.006932823598652933 2.4309846387200458 +TP53 FBN2 4 51 5 613 9.615686274509804 1 0.0037069383323409563 0.006932823598652933 2.4309846387200458 +TP53 IDH1 4 51 5 613 9.615686274509804 1 0.0037069383323409563 0.006932823598652933 2.4309846387200458 +TP53 KDM6A 2 53 7 611 3.293800539083558 1 0.16303504394278226 0.2082564429926051 0.7877190351348535 +TP53 KRAS 0 55 9 609 0 -1 1 1 0 +TP53 CCDC168 4 51 4 614 12.03921568627451 1 0.0021922768587821625 0.004269537602556676 2.659104600439173 +TP53 KIAA1549 4 51 4 614 12.03921568627451 1 0.0021922768587821625 0.004269537602556676 2.659104600439173 +TP53 PCLO 5 50 3 615 20.5 1 1.4168671237216066e-4 3.638704877482113e-4 3.848670876739378 +TP53 MAGEL2 6 49 2 616 37.714285714285715 1 5.647561195692147e-6 3.159023956494466e-5 5.248139054465603 +TP53 PHLPP1 3 52 5 613 7.073076923076923 1 0.021562466857178202 0.03071397895353872 1.666301555119146 +TP53 PTPRZ1 4 51 4 614 12.03921568627451 1 0.0021922768587821625 0.004269537602556676 2.659104600439173 +TP53 COL4A3 5 50 3 615 20.5 1 1.4168671237216066e-4 3.638704877482113e-4 3.848670876739378 +TP53 IGSF10 3 52 5 613 7.073076923076923 1 0.021562466857178202 0.03071397895353872 1.666301555119146 +TP53 PIK3R1 5 50 3 615 20.5 1 1.4168671237216066e-4 3.638704877482113e-4 3.848670876739378 +TP53 ADGRV1 4 51 3 615 16.07843137254902 1 0.0011669817855771607 0.002316941146405222 2.93293592243369 +TP53 PRKDC 3 52 4 614 8.85576923076923 1 0.014298645607779666 0.021027420011440687 1.8447050977044934 +TP53 KIAA1109 5 50 2 616 30.8 1 5.666224288686785e-5 2.006784804266891e-4 4.246706238602885 +TP53 LRP1 5 50 2 616 30.8 1 5.666224288686785e-5 2.006784804266891e-4 4.246706238602885 +TP53 MUC5AC 4 51 3 615 16.07843137254902 1 0.0011669817855771607 0.002316941146405222 2.93293592243369 +TP53 MYH14 4 51 3 615 16.07843137254902 1 0.0011669817855771607 0.002316941146405222 2.93293592243369 +TP53 MYO10 4 51 3 615 16.07843137254902 1 0.0011669817855771607 0.002316941146405222 2.93293592243369 +TP53 RP1L1 3 52 4 614 8.85576923076923 1 0.014298645607779666 0.021027420011440687 1.8447050977044934 +TP53 CELSR1 3 52 4 614 8.85576923076923 1 0.014298645607779666 0.021027420011440687 1.8447050977044934 +TP53 CENPF 3 52 4 614 8.85576923076923 1 0.014298645607779666 0.021027420011440687 1.8447050977044934 +TP53 DNHD1 3 52 4 614 8.85576923076923 1 0.014298645607779666 0.021027420011440687 1.8447050977044934 +BRAF H3F3A 2 48 38 585 0.6414473684210527 -1 0.7598418768830075 0.854734893647093 -0.11927677501131115 +BRAF CTNNB1 0 50 35 588 0 -1 0.10024023469698344 0.13677123521355058 -0.998957925179454 +BRAF NF1 2 48 23 600 1.0869565217391304 1 0.7080107491214925 0.797162837935504 0.14996014873860378 +BRAF ATRX 1 49 22 601 0.5575139146567718 -1 1 1 0 +BRAF FGFR1 0 50 16 607 0 -1 0.6229159346586182 0.7019981784331253 -0.2055705594039222 +BRAF NF2 0 50 16 607 0 -1 0.6229159346586182 0.7019981784331253 -0.2055705594039222 +BRAF PIK3CA 1 49 14 609 0.8877551020408163 -1 1 1 0 +BRAF KMT2D 1 49 13 610 0.957613814756672 -1 1 1 0 +BRAF BCOR 1 49 13 610 0.957613814756672 -1 1 1 0 +BRAF SMARCA4 1 49 11 612 1.1354359925788498 1 0.6071592252108872 0.6867682833641152 0.21669740190261755 +BRAF KMT2C 1 49 11 612 1.1354359925788498 1 0.6071592252108872 0.6867682833641152 0.21669740190261755 +BRAF SETD2 1 49 10 613 1.2510204081632652 1 0.5750643906692928 0.6522721097869294 0.24028352409873294 +BRAF PDGFRA 1 49 10 613 1.2510204081632652 1 0.5750643906692928 0.6522721097869294 0.24028352409873294 +BRAF PTPN11 1 49 10 613 1.2510204081632652 1 0.5750643906692928 0.6522721097869294 0.24028352409873294 +BRAF DDX3X 0 50 11 612 0 -1 1 1 0 +BRAF RYR2 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF ATM 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF DNAH14 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF EGFR 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF LRP1B 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF PTEN 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF STAG2 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF PPM1D 1 49 9 614 1.3922902494331066 1 0.5404040636439494 0.6146657177008711 0.26728139389962163 +BRAF FSIP2 1 49 8 615 1.5688775510204083 1 0.5029776844618606 0.5769172878893065 0.2984512827970795 +BRAF FBN2 1 49 8 615 1.5688775510204083 1 0.5029776844618606 0.5769172878893065 0.2984512827970795 +BRAF IDH1 0 50 9 614 0 -1 1 1 0 +BRAF KDM6A 1 49 8 615 1.5688775510204083 1 0.5029776844618606 0.5769172878893065 0.2984512827970795 +BRAF KRAS 0 50 9 614 0 -1 1 1 0 +BRAF CCDC168 1 49 7 616 1.7959183673469388 1 0.4625693661254266 0.5325634149470372 0.33482313197009617 +BRAF KIAA1549 1 49 7 616 1.7959183673469388 1 0.4625693661254266 0.5325634149470372 0.33482313197009617 +BRAF PCLO 1 49 7 616 1.7959183673469388 1 0.4625693661254266 0.5325634149470372 0.33482313197009617 +BRAF MAGEL2 1 49 7 616 1.7959183673469388 1 0.4625693661254266 0.5325634149470372 0.33482313197009617 +BRAF PHLPP1 1 49 7 616 1.7959183673469388 1 0.4625693661254266 0.5325634149470372 0.33482313197009617 +BRAF PTPRZ1 2 48 6 617 4.284722222222222 1 0.1135884350380413 0.15223832923588684 0.9446658838964822 +BRAF COL4A3 2 48 6 617 4.284722222222222 1 0.1135884350380413 0.15223832923588684 0.9446658838964822 +BRAF IGSF10 1 49 7 616 1.7959183673469388 1 0.4625693661254266 0.5325634149470372 0.33482313197009617 +BRAF PIK3R1 1 49 7 616 1.7959183673469388 1 0.4625693661254266 0.5325634149470372 0.33482313197009617 +BRAF ADGRV1 2 48 5 618 5.15 1 0.08933793678784405 0.12365985600577284 1.048964081548544 +BRAF PRKDC 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF KIAA1109 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF LRP1 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF MUC5AC 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF MYH14 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF MYO10 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF RP1L1 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF CELSR1 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF CENPF 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +BRAF DNHD1 1 49 6 617 2.098639455782313 1 0.4189467497395034 0.4897039775103928 0.37784117456107 +H3F3A CTNNB1 0 40 35 598 0 -1 0.2577217882358251 0.3153937967920936 -0.5888488639070322 +H3F3A NF1 7 33 18 615 7.247474747474747 1 3.342908243122359e-4 7.391809743366226e-4 3.475875543853896 +H3F3A ATRX 13 27 10 623 29.996296296296297 1 1.1231540259878198e-11 6.8793184091753956e-9 10.949560681806537 +H3F3A FGFR1 0 40 16 617 0 -1 0.6159059654904541 0.6953777029730933 -0.21048558943622853 +H3F3A NF2 0 40 16 617 0 -1 0.6159059654904541 0.6953777029730933 -0.21048558943622853 +H3F3A PIK3CA 2 38 13 620 2.5101214574898787 1 0.22232786432710075 0.27427153454249587 0.6530061038095953 +H3F3A KMT2D 0 40 14 619 0 -1 1 1 0 +H3F3A BCOR 2 38 12 621 2.723684210526316 1 0.19985524075529928 0.24956439339983855 0.6992844588561389 +H3F3A SMARCA4 0 40 12 621 0 -1 1 1 0 +H3F3A KMT2C 1 39 11 622 1.4498834498834499 1 0.5236344432597871 0.600048824128381 0.28097179446335957 +H3F3A SETD2 0 40 11 622 0 -1 1 1 0 +H3F3A PDGFRA 3 37 8 625 6.33445945945946 1 0.023028094342523557 0.032687619431739694 1.6377419999762635 +H3F3A PTPN11 4 36 7 626 9.936507936507937 1 0.002617885767855092 0.005010796977535137 2.5820493079275684 +H3F3A DDX3X 0 40 11 622 0 -1 1 1 0 +H3F3A RYR2 1 39 9 624 1.7777777777777777 1 0.46044783552610835 0.5325634149470372 0.33681956422153037 +H3F3A ATM 1 39 9 624 1.7777777777777777 1 0.46044783552610835 0.5325634149470372 0.33681956422153037 +H3F3A DNAH14 1 39 9 624 1.7777777777777777 1 0.46044783552610835 0.5325634149470372 0.33681956422153037 +H3F3A EGFR 1 39 9 624 1.7777777777777777 1 0.46044783552610835 0.5325634149470372 0.33681956422153037 +H3F3A LRP1B 0 40 10 623 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +H3F3A PTEN 3 37 7 626 7.250965250965251 1 0.017461673822159445 0.02525448693287523 1.757914128506411 +H3F3A STAG2 0 40 10 623 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +H3F3A PPM1D 8 32 2 631 78.875 1 3.167492161643281e-9 2.282457587066482e-7 8.499284451159369 +H3F3A FSIP2 1 39 8 625 2.003205128205128 1 0.42586115831624355 0.4973116481767382 0.37073196898512933 +H3F3A FBN2 0 40 9 624 0 -1 1 1 0 +H3F3A IDH1 0 40 9 624 0 -1 1 1 0 +H3F3A KDM6A 0 40 9 624 0 -1 1 1 0 +H3F3A KRAS 0 40 9 624 0 -1 1 1 0 +H3F3A CCDC168 1 39 7 626 2.293040293040293 1 0.3891162724484832 0.4623350472836003 0.40992060706104 +H3F3A KIAA1549 0 40 8 625 0 -1 1 1 0 +H3F3A PCLO 0 40 8 625 0 -1 1 1 0 +H3F3A MAGEL2 0 40 8 625 0 -1 1 1 0 +H3F3A PHLPP1 0 40 8 625 0 -1 1 1 0 +H3F3A PTPRZ1 0 40 8 625 0 -1 1 1 0 +H3F3A COL4A3 1 39 7 626 2.293040293040293 1 0.3891162724484832 0.4623350472836003 0.40992060706104 +H3F3A IGSF10 1 39 7 626 2.293040293040293 1 0.3891162724484832 0.4623350472836003 0.40992060706104 +H3F3A PIK3R1 1 39 7 626 2.293040293040293 1 0.3891162724484832 0.4623350472836003 0.40992060706104 +H3F3A ADGRV1 0 40 7 626 0 -1 1 1 0 +H3F3A PRKDC 0 40 7 626 0 -1 1 1 0 +H3F3A KIAA1109 0 40 7 626 0 -1 1 1 0 +H3F3A LRP1 1 39 6 627 2.6794871794871793 1 0.3500821684515811 0.41839088424701154 0.45583000960144554 +H3F3A MUC5AC 1 39 6 627 2.6794871794871793 1 0.3500821684515811 0.41839088424701154 0.45583000960144554 +H3F3A MYH14 0 40 7 626 0 -1 1 1 0 +H3F3A MYO10 1 39 6 627 2.6794871794871793 1 0.3500821684515811 0.41839088424701154 0.45583000960144554 +H3F3A RP1L1 1 39 6 627 2.6794871794871793 1 0.3500821684515811 0.41839088424701154 0.45583000960144554 +H3F3A CELSR1 1 39 6 627 2.6794871794871793 1 0.3500821684515811 0.41839088424701154 0.45583000960144554 +H3F3A CENPF 0 40 7 626 0 -1 1 1 0 +H3F3A DNHD1 1 39 6 627 2.6794871794871793 1 0.3500821684515811 0.41839088424701154 0.45583000960144554 +CTNNB1 NF1 1 34 24 614 0.7524509803921569 -1 1 1 0 +CTNNB1 ATRX 1 34 22 616 0.8235294117647058 -1 1 1 0 +CTNNB1 FGFR1 1 34 15 623 1.2215686274509805 1 0.578717446094615 0.6558083917353408 0.237533425138758 +CTNNB1 NF2 0 35 16 622 0 -1 1 1 0 +CTNNB1 PIK3CA 3 32 12 626 4.890625 1 0.03813764970972202 0.053392709593610824 1.4186460745188962 +CTNNB1 KMT2D 4 31 10 628 8.103225806451613 1 0.004243541798125911 0.0077008157180656275 2.372271515743476 +CTNNB1 BCOR 0 35 14 624 0 -1 1 1 0 +CTNNB1 SMARCA4 4 31 8 630 10.161290322580646 1 0.0022624718974434 0.004392279040203113 2.645416806536486 +CTNNB1 KMT2C 1 34 11 627 1.6764705882352942 1 0.4760338983672514 0.5475507281689042 0.3223621200743427 +CTNNB1 SETD2 1 34 10 628 1.8470588235294119 1 0.44678539189652366 0.5202586550125871 0.34990103502474784 +CTNNB1 PDGFRA 1 34 10 628 1.8470588235294119 1 0.44678539189652366 0.5202586550125871 0.34990103502474784 +CTNNB1 PTPN11 1 34 10 628 1.8470588235294119 1 0.44678539189652366 0.5202586550125871 0.34990103502474784 +CTNNB1 DDX3X 5 30 6 632 17.555555555555557 1 1.0523898442424583e-4 3.033358962816497e-4 3.9778233515885595 +CTNNB1 RYR2 2 33 8 630 4.7727272727272725 1 0.09096716508870582 0.12450813098733478 1.0411153394819948 +CTNNB1 ATM 1 34 9 629 2.0555555555555554 1 0.4159533675595465 0.4897039775103928 0.3809553553029681 +CTNNB1 DNAH14 1 34 9 629 2.0555555555555554 1 0.4159533675595465 0.4897039775103928 0.3809553553029681 +CTNNB1 EGFR 1 34 9 629 2.0555555555555554 1 0.4159533675595465 0.4897039775103928 0.3809553553029681 +CTNNB1 LRP1B 1 34 9 629 2.0555555555555554 1 0.4159533675595465 0.4897039775103928 0.3809553553029681 +CTNNB1 PTEN 1 34 9 629 2.0555555555555554 1 0.4159533675595465 0.4897039775103928 0.3809553553029681 +CTNNB1 STAG2 2 33 8 630 4.7727272727272725 1 0.09096716508870582 0.12450813098733478 1.0411153394819948 +CTNNB1 PPM1D 1 34 9 629 2.0555555555555554 1 0.4159533675595465 0.4897039775103928 0.3809553553029681 +CTNNB1 FSIP2 1 34 8 630 2.3161764705882355 1 0.38345474731246215 0.4573827317018171 0.4162858811337714 +CTNNB1 FBN2 1 34 8 630 2.3161764705882355 1 0.38345474731246215 0.4573827317018171 0.4162858811337714 +CTNNB1 IDH1 0 35 9 629 0 -1 1 1 0 +CTNNB1 KDM6A 0 35 9 629 0 -1 1 1 0 +CTNNB1 KRAS 0 35 9 629 0 -1 1 1 0 +CTNNB1 CCDC168 1 34 7 631 2.6512605042016806 1 0.34920223327426586 0.41839088424701154 0.4569229874876912 +CTNNB1 KIAA1549 1 34 7 631 2.6512605042016806 1 0.34920223327426586 0.41839088424701154 0.4569229874876912 +CTNNB1 PCLO 2 33 6 632 6.383838383838384 1 0.06041717038487511 0.08372288882519457 1.2188396186028148 +CTNNB1 MAGEL2 2 33 6 632 6.383838383838384 1 0.06041717038487511 0.08372288882519457 1.2188396186028148 +CTNNB1 PHLPP1 2 33 6 632 6.383838383838384 1 0.06041717038487511 0.08372288882519457 1.2188396186028148 +CTNNB1 PTPRZ1 1 34 7 631 2.6512605042016806 1 0.34920223327426586 0.41839088424701154 0.4569229874876912 +CTNNB1 COL4A3 1 34 7 631 2.6512605042016806 1 0.34920223327426586 0.41839088424701154 0.4569229874876912 +CTNNB1 IGSF10 0 35 8 630 0 -1 1 1 0 +CTNNB1 PIK3R1 1 34 7 631 2.6512605042016806 1 0.34920223327426586 0.41839088424701154 0.4569229874876912 +CTNNB1 ADGRV1 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 PRKDC 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 KIAA1109 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 LRP1 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 MUC5AC 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 MYH14 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 MYO10 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 RP1L1 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 CELSR1 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 CENPF 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +CTNNB1 DNHD1 1 34 6 632 3.0980392156862746 1 0.31310410041309206 0.3786303287325151 0.5043112448228204 +NF1 ATRX 9 16 14 634 25.473214285714285 1 1.6566376088670266e-8 7.805311811008106e-7 7.780772483543301 +NF1 FGFR1 6 19 10 638 20.147368421052633 1 8.769091526792462e-6 4.6908895721924745e-5 5.057045396980323 +NF1 NF2 1 24 15 633 1.7583333333333333 1 0.4580940495498191 0.5325634149470372 0.33904534949102505 +NF1 PIK3CA 3 22 12 636 7.2272727272727275 1 0.01535443620232682 0.02239188612839328 1.8137661257343414 +NF1 KMT2D 4 21 10 638 12.152380952380952 1 0.0011588589877461431 0.0023158275040604005 2.9359694066330677 +NF1 BCOR 3 22 11 637 7.896694214876033 1 0.01259165505790643 0.018879776555612456 1.8999171821022065 +NF1 SMARCA4 4 21 8 640 15.238095238095237 1 6.029993378939866e-4 0.0012519901507120905 3.219683164724104 +NF1 KMT2C 4 21 8 640 15.238095238095237 1 6.029993378939866e-4 0.0012519901507120905 3.219683164724104 +NF1 SETD2 5 20 6 642 26.75 1 1.8604854394646392e-5 9.34055189895157e-5 4.730373724505605 +NF1 PDGFRA 3 22 8 640 10.909090909090908 1 0.006148731304370263 0.01049052346497712 2.211214484932092 +NF1 PTPN11 4 21 7 641 17.4421768707483 1 4.1236480154636495e-4 8.800468325684619e-4 3.3847184121241556 +NF1 DDX3X 2 23 9 639 6.173913043478261 1 0.059355609011722335 0.08253191945443798 1.226538234624487 +NF1 RYR2 5 20 5 643 32.15 1 1.0408491858353093e-5 5.4027129349502276e-5 4.982612193164246 +NF1 ATM 5 20 5 643 32.15 1 1.0408491858353093e-5 5.4027129349502276e-5 4.982612193164246 +NF1 DNAH14 5 20 5 643 32.15 1 1.0408491858353093e-5 5.4027129349502276e-5 4.982612193164246 +NF1 EGFR 3 22 7 641 12.487012987012987 1 0.004584267712691022 0.008246296546323792 2.3387300283117143 +NF1 LRP1B 5 20 5 643 32.15 1 1.0408491858353093e-5 5.4027129349502276e-5 4.982612193164246 +NF1 PTEN 5 20 5 643 32.15 1 1.0408491858353093e-5 5.4027129349502276e-5 4.982612193164246 +NF1 STAG2 2 23 8 640 6.956521739130435 1 0.04968163124674926 0.06923776823352427 1.3038041529717497 +NF1 PPM1D 5 20 5 643 32.15 1 1.0408491858353093e-5 5.4027129349502276e-5 4.982612193164246 +NF1 FSIP2 4 21 5 643 24.495238095238093 1 1.6567101647442105e-4 4.1502453002283395e-4 3.7807534631329798 +NF1 FBN2 5 20 4 644 40.25 1 5.33770956140533e-6 2.9994010150098756e-5 5.272645060992614 +NF1 IDH1 0 25 9 639 0 -1 1 1 0 +NF1 KDM6A 2 23 7 641 7.962732919254658 1 0.04066215853993763 0.05686203677103151 1.3908095706782677 +NF1 KRAS 0 25 9 639 0 -1 1 1 0 +NF1 CCDC168 5 20 3 645 53.75 1 2.4331206680535724e-6 1.5129811260739219e-5 5.613836352158253 +NF1 KIAA1549 5 20 3 645 53.75 1 2.4331206680535724e-6 1.5129811260739219e-5 5.613836352158253 +NF1 PCLO 5 20 3 645 53.75 1 2.4331206680535724e-6 1.5129811260739219e-5 5.613836352158253 +NF1 MAGEL2 5 20 3 645 53.75 1 2.4331206680535724e-6 1.5129811260739219e-5 5.613836352158253 +NF1 PHLPP1 4 21 4 644 30.666666666666668 1 9.441176895752517e-5 2.727698513513404e-4 4.02497386507981 +NF1 PTPRZ1 5 20 3 645 53.75 1 2.4331206680535724e-6 1.5129811260739219e-5 5.613836352158253 +NF1 COL4A3 3 22 5 643 17.536363636363635 1 0.002248384477990971 0.004371858707204666 2.6481294215761015 +NF1 IGSF10 4 21 4 644 30.666666666666668 1 9.441176895752517e-5 2.727698513513404e-4 4.02497386507981 +NF1 PIK3R1 4 21 4 644 30.666666666666668 1 9.441176895752517e-5 2.727698513513404e-4 4.02497386507981 +NF1 ADGRV1 5 20 2 646 80.75 1 9.357938354342688e-7 7.642316322713195e-6 6.028819820060379 +NF1 PRKDC 4 21 3 645 40.95238095238095 1 4.842244481278939e-5 1.754955470286006e-4 4.31495328713924 +NF1 KIAA1109 7 18 0 648 Inf 1 3.997556257416914e-11 1.2242516038339299e-8 10.398205415733369 +NF1 LRP1 6 19 1 647 204.31578947368422 1 9.583615132912689e-9 5.590442160865736e-7 8.018470635377179 +NF1 MUC5AC 4 21 3 645 40.95238095238095 1 4.842244481278939e-5 1.754955470286006e-4 4.31495328713924 +NF1 MYH14 4 21 3 645 40.95238095238095 1 4.842244481278939e-5 1.754955470286006e-4 4.31495328713924 +NF1 MYO10 4 21 3 645 40.95238095238095 1 4.842244481278939e-5 1.754955470286006e-4 4.31495328713924 +NF1 RP1L1 5 20 2 646 80.75 1 9.357938354342688e-7 7.642316322713195e-6 6.028819820060379 +NF1 CELSR1 5 20 2 646 80.75 1 9.357938354342688e-7 7.642316322713195e-6 6.028819820060379 +NF1 CENPF 3 22 4 644 21.954545454545453 1 0.0014406447121034305 0.002851033557878356 2.841443110510004 +NF1 DNHD1 4 21 3 645 40.95238095238095 1 4.842244481278939e-5 1.754955470286006e-4 4.31495328713924 +ATRX FGFR1 2 21 14 636 4.326530612244898 1 0.10026168916062729 0.13677123521355058 0.9988649828771657 +ATRX NF2 2 21 14 636 4.326530612244898 1 0.10026168916062729 0.13677123521355058 0.9988649828771657 +ATRX PIK3CA 4 19 11 639 12.229665071770334 1 0.0011076952661250629 0.0022317873371763193 2.9555797002962425 +ATRX KMT2D 4 19 10 640 13.473684210526315 1 8.312403739014032e-4 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KRAS 0 23 9 641 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +ATRX CCDC168 3 20 5 645 19.35 1 0.001751131181947493 0.0034286456570222228 2.7566813185299632 +ATRX KIAA1549 4 19 4 646 34 1 6.673831703961094e-5 2.1976999562775106e-4 4.175624749278856 +ATRX PCLO 4 19 4 646 34 1 6.673831703961094e-5 2.1976999562775106e-4 4.175624749278856 +ATRX MAGEL2 3 20 5 645 19.35 1 0.001751131181947493 0.0034286456570222228 2.7566813185299632 +ATRX PHLPP1 3 20 5 645 19.35 1 0.001751131181947493 0.0034286456570222228 2.7566813185299632 +ATRX PTPRZ1 3 20 5 645 19.35 1 0.001751131181947493 0.0034286456570222228 2.7566813185299632 +ATRX COL4A3 3 20 5 645 19.35 1 0.001751131181947493 0.0034286456570222228 2.7566813185299632 +ATRX IGSF10 4 19 4 646 34 1 6.673831703961094e-5 2.1976999562775106e-4 4.175624749278856 +ATRX PIK3R1 4 19 4 646 34 1 6.673831703961094e-5 2.1976999562775106e-4 4.175624749278856 +ATRX ADGRV1 4 19 3 647 45.40350877192982 1 3.4145575845572885e-5 1.393894781347073e-4 4.466665558756209 +ATRX PRKDC 3 20 4 646 24.225 1 0.0011194838576070367 0.0022407969372036274 2.9509821643473293 +ATRX KIAA1109 4 19 3 647 45.40350877192982 1 3.4145575845572885e-5 1.393894781347073e-4 4.466665558756209 +ATRX LRP1 5 18 2 648 90 1 5.957062393452567e-7 6.081167859982829e-6 6.224967851136634 +ATRX MUC5AC 3 20 4 646 24.225 1 0.0011194838576070367 0.0022407969372036274 2.9509821643473293 +ATRX MYH14 3 20 4 646 24.225 1 0.0011194838576070367 0.0022407969372036274 2.9509821643473293 +ATRX MYO10 4 19 3 647 45.40350877192982 1 3.4145575845572885e-5 1.393894781347073e-4 4.466665558756209 +ATRX RP1L1 4 19 3 647 45.40350877192982 1 3.4145575845572885e-5 1.393894781347073e-4 4.466665558756209 +ATRX CELSR1 4 19 3 647 45.40350877192982 1 3.4145575845572885e-5 1.393894781347073e-4 4.466665558756209 +ATRX CENPF 3 20 4 646 24.225 1 0.0011194838576070367 0.0022407969372036274 2.9509821643473293 +ATRX DNHD1 4 19 3 647 45.40350877192982 1 3.4145575845572885e-5 1.393894781347073e-4 4.466665558756209 +FGFR1 NF2 1 15 15 642 2.8533333333333335 1 0.3225313318769652 0.3896458397921917 0.49142809001996113 +FGFR1 PIK3CA 5 11 10 647 29.40909090909091 1 1.0073083414895058e-5 5.3650118188028025e-5 4.996837569654952 +FGFR1 KMT2D 2 14 12 645 7.678571428571429 1 0.04084591761344843 0.057053875799856706 1.3888513429638651 +FGFR1 BCOR 0 16 14 643 0 -1 1 1 0 +FGFR1 SMARCA4 2 14 10 647 9.242857142857142 1 0.03045976757103932 0.04283951237029066 1.5162734149527073 +FGFR1 KMT2C 2 14 10 647 9.242857142857142 1 0.03045976757103932 0.04283951237029066 1.5162734149527073 +FGFR1 SETD2 2 14 9 648 10.285714285714286 1 0.025738903857087894 0.03636696335055671 1.5894099523405174 +FGFR1 PDGFRA 2 14 9 648 10.285714285714286 1 0.025738903857087894 0.03636696335055671 1.5894099523405174 +FGFR1 PTPN11 3 13 8 649 18.721153846153847 1 0.0016246154416879786 0.0032099256710770544 2.789249423188336 +FGFR1 DDX3X 1 15 10 647 4.3133333333333335 1 0.23408635576614334 0.2876186417387418 0.6306238993668704 +FGFR1 RYR2 2 14 8 649 11.589285714285714 1 0.02135448778156065 0.030488633487659435 1.670510841296846 +FGFR1 ATM 2 14 8 649 11.589285714285714 1 0.02135448778156065 0.030488633487659435 1.670510841296846 +FGFR1 DNAH14 2 14 8 649 11.589285714285714 1 0.02135448778156065 0.030488633487659435 1.670510841296846 +FGFR1 EGFR 2 14 8 649 11.589285714285714 1 0.02135448778156065 0.030488633487659435 1.670510841296846 +FGFR1 LRP1B 2 14 8 649 11.589285714285714 1 0.02135448778156065 0.030488633487659435 1.670510841296846 +FGFR1 PTEN 2 14 8 649 11.589285714285714 1 0.02135448778156065 0.030488633487659435 1.670510841296846 +FGFR1 STAG2 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +FGFR1 PPM1D 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +FGFR1 FSIP2 2 14 7 650 13.26530612244898 1 0.0173233921386221 0.02508410800214193 1.761367063655756 +FGFR1 FBN2 2 14 7 650 13.26530612244898 1 0.0173233921386221 0.02508410800214193 1.761367063655756 +FGFR1 IDH1 0 16 9 648 0 -1 1 1 0 +FGFR1 KDM6A 0 16 9 648 0 -1 1 1 0 +FGFR1 KRAS 1 15 8 649 5.408333333333333 1 0.195766559266035 0.24470819908254376 0.7082614921374638 +FGFR1 CCDC168 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 KIAA1549 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 PCLO 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 MAGEL2 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 PHLPP1 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 PTPRZ1 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 COL4A3 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 IGSF10 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +FGFR1 PIK3R1 2 14 6 651 15.5 1 0.01366301947959823 0.020214008288052934 1.8644533124834828 +FGFR1 ADGRV1 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 PRKDC 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 KIAA1109 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 LRP1 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 MUC5AC 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 MYH14 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 MYO10 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 RP1L1 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 CELSR1 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 CENPF 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +FGFR1 DNHD1 2 14 5 652 18.62857142857143 1 0.010391315422809456 0.015991660041383898 1.9833294722015187 +NF2 PIK3CA 0 16 15 642 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +NF2 KMT2D 1 15 13 644 3.3025641025641024 1 0.2883695517777198 0.3525476057162742 0.540050597603834 +NF2 BCOR 0 16 14 643 0 -1 1 1 0 +NF2 SMARCA4 1 15 11 646 3.915151515151515 1 0.25259786378388 0.30974212526051353 0.5975703265866897 +NF2 KMT2C 1 15 11 646 3.915151515151515 1 0.25259786378388 0.30974212526051353 0.5975703265866897 +NF2 SETD2 1 15 10 647 4.3133333333333335 1 0.23408635576614334 0.2876186417387418 0.6306238993668704 +NF2 PDGFRA 1 15 10 647 4.3133333333333335 1 0.23408635576614334 0.2876186417387418 0.6306238993668704 +NF2 PTPN11 0 16 11 646 0 -1 1 1 0 +NF2 DDX3X 1 15 10 647 4.3133333333333335 1 0.23408635576614334 0.2876186417387418 0.6306238993668704 +NF2 RYR2 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +NF2 ATM 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +NF2 DNAH14 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +NF2 EGFR 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +NF2 LRP1B 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +NF2 PTEN 1 15 9 648 4.8 1 0.21514567831986547 0.2656788870381403 0.6672673732657646 +NF2 STAG2 0 16 10 647 0 -1 1 1 0 +NF2 PPM1D 0 16 10 647 0 -1 1 1 0 +NF2 FSIP2 1 15 8 649 5.408333333333333 1 0.195766559266035 0.24470819908254376 0.7082614921374638 +NF2 FBN2 1 15 8 649 5.408333333333333 1 0.195766559266035 0.24470819908254376 0.7082614921374638 +NF2 IDH1 0 16 9 648 0 -1 1 1 0 +NF2 KDM6A 0 16 9 648 0 -1 1 1 0 +NF2 KRAS 0 16 9 648 0 -1 1 1 0 +NF2 CCDC168 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 KIAA1549 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 PCLO 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 MAGEL2 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 PHLPP1 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 PTPRZ1 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 COL4A3 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 IGSF10 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 PIK3R1 1 15 7 650 6.190476190476191 1 0.17593954069632245 0.22196286030174564 0.7546365461228418 +NF2 ADGRV1 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 PRKDC 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 KIAA1109 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 LRP1 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 MUC5AC 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 MYH14 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 MYO10 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 RP1L1 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 CELSR1 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 CENPF 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +NF2 DNHD1 1 15 6 651 7.233333333333333 1 0.15565497554423188 0.19903689461553659 0.8078369924445692 +PIK3CA KMT2D 2 13 12 646 8.282051282051283 1 0.03616887220046075 0.05069435748920414 1.4416650329788507 +PIK3CA BCOR 2 13 12 646 8.282051282051283 1 0.03616887220046075 0.05069435748920414 1.4416650329788507 +PIK3CA SMARCA4 3 12 9 649 18.02777777777778 1 0.0017521079030987032 0.0034286456570222228 2.7564391514343 +PIK3CA KMT2C 2 13 10 648 9.96923076923077 1 0.026919119785575745 0.03799069324577222 1.5699391449873303 +PIK3CA SETD2 2 13 9 649 11.094017094017094 1 0.022724617805162915 0.03229426544237189 1.6435034122426093 +PIK3CA PDGFRA 2 13 9 649 11.094017094017094 1 0.022724617805162915 0.03229426544237189 1.6435034122426093 +PIK3CA PTPN11 3 12 8 650 20.3125 1 0.00133201140274919 0.002640313864672747 2.8754920573505114 +PIK3CA DDX3X 0 15 11 647 0 -1 1 1 0 +PIK3CA RYR2 2 13 8 650 12.5 1 0.018835053004724066 0.027112737874015254 1.7250331532878023 +PIK3CA ATM 2 13 8 650 12.5 1 0.018835053004724066 0.027112737874015254 1.7250331532878023 +PIK3CA DNAH14 3 12 7 651 23.25 1 9.819505707096938e-4 0.001984966087655734 3.0079103731176464 +PIK3CA EGFR 3 12 7 651 23.25 1 9.819505707096938e-4 0.001984966087655734 3.0079103731176464 +PIK3CA LRP1B 2 13 8 650 12.5 1 0.018835053004724066 0.027112737874015254 1.7250331532878023 +PIK3CA PTEN 2 13 8 650 12.5 1 0.018835053004724066 0.027112737874015254 1.7250331532878023 +PIK3CA STAG2 3 12 7 651 23.25 1 9.819505707096938e-4 0.001984966087655734 3.0079103731176464 +PIK3CA PPM1D 3 12 7 651 23.25 1 9.819505707096938e-4 0.001984966087655734 3.0079103731176464 +PIK3CA FSIP2 2 13 7 651 14.307692307692308 1 0.015264432517921197 0.02228716309231641 1.816319336725066 +PIK3CA FBN2 2 13 7 651 14.307692307692308 1 0.015264432517921197 0.02228716309231641 1.816319336725066 +PIK3CA IDH1 0 15 9 649 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +PIK3CA KDM6A 2 13 7 651 14.307692307692308 1 0.015264432517921197 0.02228716309231641 1.816319336725066 +PIK3CA KRAS 0 15 9 649 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +PIK3CA CCDC168 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA KIAA1549 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA PCLO 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA MAGEL2 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA PHLPP1 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA PTPRZ1 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA COL4A3 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA IGSF10 1 14 7 651 6.642857142857143 1 0.16579725812027712 0.21156420958056196 0.7804226558911731 +PIK3CA PIK3R1 2 13 6 652 16.71794871794872 1 0.012027167451203842 0.018234257583817703 1.9198366424157343 +PIK3CA ADGRV1 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA PRKDC 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA KIAA1109 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA LRP1 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA MUC5AC 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA MYH14 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA MYO10 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA RP1L1 3 12 4 654 40.875 1 2.9827754253435333e-4 6.607413916900231e-4 3.5253794436562362 +PIK3CA CELSR1 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA CENPF 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +PIK3CA DNHD1 2 13 5 653 20.092307692307692 1 0.009138082158725087 0.014519002132864113 2.0391449416052705 +KMT2D BCOR 1 13 13 646 3.8224852071005917 1 0.25711729447965337 0.3149686857375754 0.5898687104264803 +KMT2D SMARCA4 5 9 7 652 51.74603174603175 1 1.2922245431499e-6 9.955818021123443e-6 5.888662014686233 +KMT2D KMT2C 4 10 8 651 32.55 1 5.3108395223622825e-5 1.919108676959822e-4 4.274836821458946 +KMT2D SETD2 5 9 6 653 60.46296296296296 1 7.62406847030545e-7 7.075302994998274e-6 6.117813212036269 +KMT2D PDGFRA 3 11 8 651 22.193181818181817 1 0.001075300125920223 0.0021700867450614053 2.9684703033396493 +KMT2D PTPN11 2 12 9 650 12.037037037037036 1 0.019872270284841096 0.0285722195996835 1.701752514578355 +KMT2D DDX3X 4 10 7 652 37.25714285714286 1 3.5836338330131896e-5 1.393894781347073e-4 4.445676371896606 +KMT2D RYR2 4 10 6 653 43.53333333333333 1 2.3082181427185853e-5 1.075327909184011e-4 4.63672314971817 +KMT2D ATM 4 10 6 653 43.53333333333333 1 2.3082181427185853e-5 1.075327909184011e-4 4.63672314971817 +KMT2D DNAH14 3 11 7 652 25.4025974025974 1 7.918100020320196e-4 0.0016220188168716123 3.1013790166026594 +KMT2D EGFR 3 11 7 652 25.4025974025974 1 7.918100020320196e-4 0.0016220188168716123 3.1013790166026594 +KMT2D LRP1B 3 11 7 652 25.4025974025974 1 7.918100020320196e-4 0.0016220188168716123 3.1013790166026594 +KMT2D PTEN 3 11 7 652 25.4025974025974 1 7.918100020320196e-4 0.0016220188168716123 3.1013790166026594 +KMT2D STAG2 2 12 8 651 13.5625 1 0.016454639346855465 0.023882622274760595 1.78371163214123 +KMT2D PPM1D 2 12 8 651 13.5625 1 0.016454639346855465 0.023882622274760595 1.78371163214123 +KMT2D FSIP2 3 11 6 653 29.681818181818183 1 5.611916558505685e-4 0.0011691492830220177 3.2508887949583514 +KMT2D FBN2 3 11 6 653 29.681818181818183 1 5.611916558505685e-4 0.0011691492830220177 3.2508887949583514 +KMT2D IDH1 0 14 9 650 0 -1 1 1 0 +KMT2D KDM6A 2 12 7 652 15.523809523809524 1 0.01332207347789079 0.01990187806148319 1.8754281753215176 +KMT2D KRAS 0 14 9 650 0 -1 1 1 0 +KMT2D CCDC168 3 11 5 654 35.67272727272727 1 3.7880028728644164e-4 8.098260941115026e-4 3.4215897002947697 +KMT2D KIAA1549 4 10 4 655 65.5 1 7.882060695783745e-6 4.2348791019013544e-5 5.10336022517424 +KMT2D PCLO 4 10 4 655 65.5 1 7.882060695783745e-6 4.2348791019013544e-5 5.10336022517424 +KMT2D MAGEL2 3 11 5 654 35.67272727272727 1 3.7880028728644164e-4 8.098260941115026e-4 3.4215897002947697 +KMT2D PHLPP1 3 11 5 654 35.67272727272727 1 3.7880028728644164e-4 8.098260941115026e-4 3.4215897002947697 +KMT2D PTPRZ1 3 11 5 654 35.67272727272727 1 3.7880028728644164e-4 8.098260941115026e-4 3.4215897002947697 +KMT2D COL4A3 3 11 5 654 35.67272727272727 1 3.7880028728644164e-4 8.098260941115026e-4 3.4215897002947697 +KMT2D IGSF10 3 11 5 654 35.67272727272727 1 3.7880028728644164e-4 8.098260941115026e-4 3.4215897002947697 +KMT2D PIK3R1 4 10 4 655 65.5 1 7.882060695783745e-6 4.2348791019013544e-5 5.10336022517424 +KMT2D ADGRV1 4 10 3 656 87.46666666666667 1 3.988835035003953e-6 2.2940483182534474e-5 5.399153924299069 +KMT2D PRKDC 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +KMT2D KIAA1109 4 10 3 656 87.46666666666667 1 3.988835035003953e-6 2.2940483182534474e-5 5.399153924299069 +KMT2D LRP1 4 10 3 656 87.46666666666667 1 3.988835035003953e-6 2.2940483182534474e-5 5.399153924299069 +KMT2D MUC5AC 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +KMT2D MYH14 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +KMT2D MYO10 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +KMT2D RP1L1 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +KMT2D CELSR1 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +KMT2D CENPF 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +KMT2D DNHD1 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +BCOR SMARCA4 2 12 10 649 10.816666666666666 1 0.023563518201245477 0.03337030034280429 1.6277598657815557 +BCOR KMT2C 2 12 10 649 10.816666666666666 1 0.023563518201245477 0.03337030034280429 1.6277598657815557 +BCOR SETD2 1 13 10 649 4.992307692307692 1 0.2078419718740495 0.25874635726190104 0.682266745938309 +BCOR PDGFRA 1 13 10 649 4.992307692307692 1 0.2078419718740495 0.25874635726190104 0.682266745938309 +BCOR PTPN11 1 13 10 649 4.992307692307692 1 0.2078419718740495 0.25874635726190104 0.682266745938309 +BCOR DDX3X 0 14 11 648 0 -1 1 1 0 +BCOR RYR2 1 13 9 650 5.555555555555555 1 0.1907538171841216 0.2399111150416314 0.7195267625976516 +BCOR ATM 2 12 8 651 13.5625 1 0.016454639346855465 0.023882622274760595 1.78371163214123 +BCOR DNAH14 2 12 8 651 13.5625 1 0.016454639346855465 0.023882622274760595 1.78371163214123 +BCOR EGFR 4 10 6 653 43.53333333333333 1 2.3082181427185853e-5 1.075327909184011e-4 4.63672314971817 +BCOR LRP1B 3 11 7 652 25.4025974025974 1 7.918100020320196e-4 0.0016220188168716123 3.1013790166026594 +BCOR PTEN 1 13 9 650 5.555555555555555 1 0.1907538171841216 0.2399111150416314 0.7195267625976516 +BCOR STAG2 1 13 9 650 5.555555555555555 1 0.1907538171841216 0.2399111150416314 0.7195267625976516 +BCOR PPM1D 3 11 7 652 25.4025974025974 1 7.918100020320196e-4 0.0016220188168716123 3.1013790166026594 +BCOR FSIP2 2 12 7 652 15.523809523809524 1 0.01332207347789079 0.01990187806148319 1.8754281753215176 +BCOR FBN2 3 11 6 653 29.681818181818183 1 5.611916558505685e-4 0.0011691492830220177 3.2508887949583514 +BCOR IDH1 0 14 9 650 0 -1 1 1 0 +BCOR KDM6A 2 12 7 652 15.523809523809524 1 0.01332207347789079 0.01990187806148319 1.8754281753215176 +BCOR KRAS 0 14 9 650 0 -1 1 1 0 +BCOR CCDC168 1 13 7 652 7.164835164835165 1 0.15554591874233895 0.19903689461553659 0.8081413795468205 +BCOR KIAA1549 1 13 7 652 7.164835164835165 1 0.15554591874233895 0.19903689461553659 0.8081413795468205 +BCOR PCLO 2 12 6 653 18.13888888888889 1 0.010486321961881847 0.016057180504131578 1.9793768122600885 +BCOR MAGEL2 1 13 7 652 7.164835164835165 1 0.15554591874233895 0.19903689461553659 0.8081413795468205 +BCOR PHLPP1 2 12 6 653 18.13888888888889 1 0.010486321961881847 0.016057180504131578 1.9793768122600885 +BCOR PTPRZ1 2 12 6 653 18.13888888888889 1 0.010486321961881847 0.016057180504131578 1.9793768122600885 +BCOR COL4A3 1 13 7 652 7.164835164835165 1 0.15554591874233895 0.19903689461553659 0.8081413795468205 +BCOR IGSF10 2 12 6 653 18.13888888888889 1 0.010486321961881847 0.016057180504131578 1.9793768122600885 +BCOR PIK3R1 1 13 7 652 7.164835164835165 1 0.15554591874233895 0.19903689461553659 0.8081413795468205 +BCOR ADGRV1 2 12 5 654 21.8 1 0.007959441543232986 0.013087672336188466 2.0991174025136567 +BCOR PRKDC 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +BCOR KIAA1109 2 12 5 654 21.8 1 0.007959441543232986 0.013087672336188466 2.0991174025136567 +BCOR LRP1 2 12 5 654 21.8 1 0.007959441543232986 0.013087672336188466 2.0991174025136567 +BCOR MUC5AC 2 12 5 654 21.8 1 0.007959441543232986 0.013087672336188466 2.0991174025136567 +BCOR MYH14 1 13 6 653 8.371794871794872 1 0.1374134691447818 0.18061319710553403 0.8619706960351272 +BCOR MYO10 2 12 5 654 21.8 1 0.007959441543232986 0.013087672336188466 2.0991174025136567 +BCOR RP1L1 2 12 5 654 21.8 1 0.007959441543232986 0.013087672336188466 2.0991174025136567 +BCOR CELSR1 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +BCOR CENPF 1 13 6 653 8.371794871794872 1 0.1374134691447818 0.18061319710553403 0.8619706960351272 +BCOR DNHD1 3 11 4 655 44.65909090909091 1 2.397059523149445e-4 5.498872501606874e-4 3.620321181546492 +SMARCA4 KMT2C 3 9 9 652 24.14814814814815 1 8.734361962529415e-4 0.0017832655673497555 3.058768814352864 +SMARCA4 SETD2 5 7 6 655 77.97619047619048 1 3.0621500740308693e-7 3.907431084049807e-6 6.513973528619361 +SMARCA4 PDGFRA 3 9 8 653 27.208333333333332 1 6.617711155670179e-4 0.0013693743523135083 3.179292192485346 +SMARCA4 PTPN11 2 10 9 652 14.488888888888889 1 0.014673999456975242 0.02150197288851037 1.8334515013327086 +SMARCA4 DDX3X 4 8 7 654 46.714285714285715 1 1.8024024843821365e-5 9.086185363654803e-5 4.744148222664214 +SMARCA4 RYR2 5 7 5 656 93.71428571428571 1 1.6850545142259753e-7 3.4403196332113664e-6 6.77338604443979 +SMARCA4 ATM 4 8 6 655 54.583333333333336 1 1.1581184903305649e-5 5.911229794395592e-5 4.936247004456475 +SMARCA4 DNAH14 3 9 7 654 31.142857142857142 1 4.8620372718796245e-4 0.0010233669515554193 3.3131817162229162 +SMARCA4 EGFR 3 9 7 654 31.142857142857142 1 4.8620372718796245e-4 0.0010233669515554193 3.3131817162229162 +SMARCA4 LRP1B 3 9 7 654 31.142857142857142 1 4.8620372718796245e-4 0.0010233669515554193 3.3131817162229162 +SMARCA4 PTEN 4 8 6 655 54.583333333333336 1 1.1581184903305649e-5 5.911229794395592e-5 4.936247004456475 +SMARCA4 STAG2 2 10 8 653 16.325 1 0.012126321576719182 0.018249071168895573 1.916270918936049 +SMARCA4 PPM1D 2 10 8 653 16.325 1 0.012126321576719182 0.018249071168895573 1.916270918936049 +SMARCA4 FSIP2 3 9 6 655 36.388888888888886 1 3.438169645025658e-4 7.561504156474742e-4 3.463672698306078 +SMARCA4 FBN2 3 9 6 655 36.388888888888886 1 3.438169645025658e-4 7.561504156474742e-4 3.463672698306078 +SMARCA4 IDH1 0 12 9 652 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +SMARCA4 KDM6A 3 9 6 655 36.388888888888886 1 3.438169645025658e-4 7.561504156474742e-4 3.463672698306078 +SMARCA4 KRAS 0 12 9 652 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +SMARCA4 CCDC168 4 8 4 657 82.125 1 3.935617530662029e-6 2.2940483182534474e-5 5.404987113592793 +SMARCA4 KIAA1549 4 8 4 657 82.125 1 3.935617530662029e-6 2.2940483182534474e-5 5.404987113592793 +SMARCA4 PCLO 4 8 4 657 82.125 1 3.935617530662029e-6 2.2940483182534474e-5 5.404987113592793 +SMARCA4 MAGEL2 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +SMARCA4 PHLPP1 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +SMARCA4 PTPRZ1 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +SMARCA4 COL4A3 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +SMARCA4 IGSF10 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +SMARCA4 PIK3R1 4 8 4 657 82.125 1 3.935617530662029e-6 2.2940483182534474e-5 5.404987113592793 +SMARCA4 ADGRV1 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +SMARCA4 PRKDC 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +SMARCA4 KIAA1109 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +SMARCA4 LRP1 5 7 2 659 235.35714285714286 1 1.4417690682076236e-8 7.064668434217356e-7 7.841104296090057 +SMARCA4 MUC5AC 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +SMARCA4 MYH14 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +SMARCA4 MYO10 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +SMARCA4 RP1L1 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +SMARCA4 CELSR1 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +SMARCA4 CENPF 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +SMARCA4 DNHD1 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +KMT2C SETD2 4 8 7 654 46.714285714285715 1 1.8024024843821365e-5 9.086185363654803e-5 4.744148222664214 +KMT2C PDGFRA 3 9 8 653 27.208333333333332 1 6.617711155670179e-4 0.0013693743523135083 3.179292192485346 +KMT2C PTPN11 2 10 9 652 14.488888888888889 1 0.014673999456975242 0.02150197288851037 1.8334515013327086 +KMT2C DDX3X 2 10 9 652 14.488888888888889 1 0.014673999456975242 0.02150197288851037 1.8334515013327086 +KMT2C RYR2 3 9 7 654 31.142857142857142 1 4.8620372718796245e-4 0.0010233669515554193 3.3131817162229162 +KMT2C ATM 3 9 7 654 31.142857142857142 1 4.8620372718796245e-4 0.0010233669515554193 3.3131817162229162 +KMT2C DNAH14 4 8 6 655 54.583333333333336 1 1.1581184903305649e-5 5.911229794395592e-5 4.936247004456475 +KMT2C EGFR 3 9 7 654 31.142857142857142 1 4.8620372718796245e-4 0.0010233669515554193 3.3131817162229162 +KMT2C LRP1B 4 8 6 655 54.583333333333336 1 1.1581184903305649e-5 5.911229794395592e-5 4.936247004456475 +KMT2C PTEN 3 9 7 654 31.142857142857142 1 4.8620372718796245e-4 0.0010233669515554193 3.3131817162229162 +KMT2C STAG2 2 10 8 653 16.325 1 0.012126321576719182 0.018249071168895573 1.916270918936049 +KMT2C PPM1D 2 10 8 653 16.325 1 0.012126321576719182 0.018249071168895573 1.916270918936049 +KMT2C FSIP2 4 8 5 656 65.6 1 7.016113122552413e-6 3.871503862669687e-5 5.153903417346657 +KMT2C FBN2 4 8 5 656 65.6 1 7.016113122552413e-6 3.871503862669687e-5 5.153903417346657 +KMT2C IDH1 0 12 9 652 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +KMT2C KDM6A 1 11 8 653 7.420454545454546 1 0.1503262662266082 0.19632161634071968 0.8229651293223917 +KMT2C KRAS 0 12 9 652 0 -1 0.9999999999999999 1 -4.8216373327664354e-17 +KMT2C CCDC168 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +KMT2C KIAA1549 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +KMT2C PCLO 4 8 4 657 82.125 1 3.935617530662029e-6 2.2940483182534474e-5 5.404987113592793 +KMT2C MAGEL2 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +KMT2C PHLPP1 4 8 4 657 82.125 1 3.935617530662029e-6 2.2940483182534474e-5 5.404987113592793 +KMT2C PTPRZ1 4 8 4 657 82.125 1 3.935617530662029e-6 2.2940483182534474e-5 5.404987113592793 +KMT2C COL4A3 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +KMT2C IGSF10 2 10 6 655 21.833333333333332 1 0.007697302219632866 0.012759398131326469 2.113661461375799 +KMT2C PIK3R1 3 9 5 656 43.733333333333334 1 2.3155001404256154e-4 5.423494592775104e-4 3.6353551883319026 +KMT2C ADGRV1 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +KMT2C PRKDC 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +KMT2C KIAA1109 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +KMT2C LRP1 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +KMT2C MUC5AC 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +KMT2C MYH14 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +KMT2C MYO10 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +KMT2C RP1L1 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +KMT2C CELSR1 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +KMT2C CENPF 3 9 4 657 54.75 1 1.4619461535059916e-4 3.669844340255819e-4 3.835068623045652 +KMT2C DNHD1 4 8 3 658 109.66666666666667 1 1.9868641358683663e-6 1.2676607116868482e-5 5.701831829447824 +SETD2 PDGFRA 3 8 8 654 30.65625 1 5.008343428862177e-4 0.0010523534648981417 3.3003058986183196 +SETD2 PTPN11 2 9 9 653 16.123456790123456 1 0.012338628066740543 0.018523062967839662 1.9087331268641794 +SETD2 DDX3X 2 9 9 653 16.123456790123456 1 0.012338628066740543 0.018523062967839662 1.9087331268641794 +SETD2 RYR2 4 7 6 656 62.476190476190474 1 7.776958419344606e-6 4.234121806087619e-5 5.10919022305818 +SETD2 ATM 4 7 6 656 62.476190476190474 1 7.776958419344606e-6 4.234121806087619e-5 5.10919022305818 +SETD2 DNAH14 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +SETD2 EGFR 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +SETD2 LRP1B 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +SETD2 PTEN 5 6 5 657 109.5 1 9.891594256965206e-8 2.9700391616375757e-6 7.004733706258885 +SETD2 STAG2 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +SETD2 PPM1D 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +SETD2 FSIP2 3 8 6 656 41 1 2.5961675165756275e-4 5.922356066676245e-4 3.5856672883057046 +SETD2 FBN2 3 8 6 656 41 1 2.5961675165756275e-4 5.922356066676245e-4 3.5856672883057046 +SETD2 IDH1 0 11 9 653 0 -1 1 1 0 +SETD2 KDM6A 2 9 7 655 20.793650793650794 1 0.008222551166427897 0.013466076442345152 2.084993415354805 +SETD2 KRAS 0 11 9 653 0 -1 1 1 0 +SETD2 CCDC168 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +SETD2 KIAA1549 4 7 4 658 94 1 2.6364486007995843e-6 1.6148247679897454e-5 5.578980691090229 +SETD2 PCLO 4 7 4 658 94 1 2.6364486007995843e-6 1.6148247679897454e-5 5.578980691090229 +SETD2 MAGEL2 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +SETD2 PHLPP1 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +SETD2 PTPRZ1 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +SETD2 COL4A3 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +SETD2 IGSF10 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +SETD2 PIK3R1 4 7 4 658 94 1 2.6364486007995843e-6 1.6148247679897454e-5 5.578980691090229 +SETD2 ADGRV1 4 7 3 659 125.52380952380952 1 1.3293819874729384e-6 9.990754200333433e-6 5.876350210016598 +SETD2 PRKDC 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +SETD2 KIAA1109 4 7 3 659 125.52380952380952 1 1.3293819874729384e-6 9.990754200333433e-6 5.876350210016598 +SETD2 LRP1 4 7 3 659 125.52380952380952 1 1.3293819874729384e-6 9.990754200333433e-6 5.876350210016598 +SETD2 MUC5AC 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +SETD2 MYH14 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +SETD2 MYO10 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +SETD2 RP1L1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +SETD2 CELSR1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +SETD2 CENPF 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +SETD2 DNHD1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA PTPN11 4 7 7 655 53.46938775510204 1 1.2118088231681948e-5 6.1596091634068e-5 4.9165658897341 +PDGFRA DDX3X 1 10 10 652 6.52 1 0.1669402141002779 0.21280100132449578 0.7774390338531684 +PDGFRA RYR2 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +PDGFRA ATM 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +PDGFRA DNAH14 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +PDGFRA EGFR 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +PDGFRA LRP1B 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +PDGFRA PTEN 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +PDGFRA STAG2 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PDGFRA PPM1D 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PDGFRA FSIP2 4 7 5 657 75.08571428571429 1 4.705741428634623e-6 2.6937071262043988e-5 5.327371940143919 +PDGFRA FBN2 3 8 6 656 41 1 2.5961675165756275e-4 5.922356066676245e-4 3.5856672883057046 +PDGFRA IDH1 0 11 9 653 0 -1 1 1 0 +PDGFRA KDM6A 1 10 8 654 8.175 1 0.13861560220829203 0.18122103810582468 0.8581878839261552 +PDGFRA KRAS 0 11 9 653 0 -1 1 1 0 +PDGFRA CCDC168 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA KIAA1549 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA PCLO 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA MAGEL2 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA PHLPP1 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA PTPRZ1 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA COL4A3 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA IGSF10 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA PIK3R1 3 8 5 657 49.275 1 1.746464149145866e-4 4.2448781402850907e-4 3.7578403249922245 +PDGFRA ADGRV1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA PRKDC 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA KIAA1109 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA LRP1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA MUC5AC 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA MYH14 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA MYO10 4 7 3 659 125.52380952380952 1 1.3293819874729384e-6 9.990754200333433e-6 5.876350210016598 +PDGFRA RP1L1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA CELSR1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA CENPF 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PDGFRA DNHD1 3 8 4 658 61.6875 1 1.1014267754691636e-4 3.04570609469464e-4 3.958044370112622 +PTPN11 DDX3X 0 11 11 651 0 -1 1 1 0 +PTPN11 RYR2 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 ATM 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 DNAH14 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 EGFR 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 LRP1B 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 PTEN 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 STAG2 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 PPM1D 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +PTPN11 FSIP2 2 9 7 655 20.793650793650794 1 0.008222551166427897 0.013466076442345152 2.084993415354805 +PTPN11 FBN2 2 9 7 655 20.793650793650794 1 0.008222551166427897 0.013466076442345152 2.084993415354805 +PTPN11 IDH1 0 11 9 653 0 -1 1 1 0 +PTPN11 KDM6A 1 10 8 654 8.175 1 0.13861560220829203 0.18122103810582468 0.8581878839261552 +PTPN11 KRAS 0 11 9 653 0 -1 1 1 0 +PTPN11 CCDC168 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 KIAA1549 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 PCLO 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 MAGEL2 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 PHLPP1 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 PTPRZ1 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 COL4A3 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 IGSF10 1 10 7 655 9.357142857142858 1 0.12412748542586265 0.1647412455543681 0.9061320424568389 +PTPN11 PIK3R1 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +PTPN11 ADGRV1 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 PRKDC 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 KIAA1109 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 LRP1 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 MUC5AC 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 MYH14 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 MYO10 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 RP1L1 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 CELSR1 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 CENPF 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +PTPN11 DNHD1 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +DDX3X RYR2 3 8 7 655 35.089285714285715 1 3.6754809161679877e-4 7.940853831227133e-4 3.4346858278523342 +DDX3X ATM 2 9 8 654 18.166666666666668 1 0.010186301935130669 0.01589582149112748 1.9919834549203246 +DDX3X DNAH14 1 10 9 653 7.2555555555555555 1 0.1528855244608654 0.1988161013424205 0.8156336326019124 +DDX3X EGFR 1 10 9 653 7.2555555555555555 1 0.1528855244608654 0.1988161013424205 0.8156336326019124 +DDX3X LRP1B 1 10 9 653 7.2555555555555555 1 0.1528855244608654 0.1988161013424205 0.8156336326019124 +DDX3X PTEN 1 10 9 653 7.2555555555555555 1 0.1528855244608654 0.1988161013424205 0.8156336326019124 +DDX3X STAG2 0 11 10 652 0 -1 1 1 0 +DDX3X PPM1D 0 11 10 652 0 -1 1 1 0 +DDX3X FSIP2 1 10 8 654 8.175 1 0.13861560220829203 0.18122103810582468 0.8581878839261552 +DDX3X FBN2 1 10 8 654 8.175 1 0.13861560220829203 0.18122103810582468 0.8581878839261552 +DDX3X IDH1 0 11 9 653 0 -1 1 1 0 +DDX3X KDM6A 1 10 8 654 8.175 1 0.13861560220829203 0.18122103810582468 0.8581878839261552 +DDX3X KRAS 0 11 9 653 0 -1 1 1 0 +DDX3X CCDC168 1 10 7 655 9.357142857142858 1 0.12412748542586265 0.1647412455543681 0.9061320424568389 +DDX3X KIAA1549 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +DDX3X PCLO 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +DDX3X MAGEL2 1 10 7 655 9.357142857142858 1 0.12412748542586265 0.1647412455543681 0.9061320424568389 +DDX3X PHLPP1 1 10 7 655 9.357142857142858 1 0.12412748542586265 0.1647412455543681 0.9061320424568389 +DDX3X PTPRZ1 1 10 7 655 9.357142857142858 1 0.12412748542586265 0.1647412455543681 0.9061320424568389 +DDX3X COL4A3 1 10 7 655 9.357142857142858 1 0.12412748542586265 0.1647412455543681 0.9061320424568389 +DDX3X IGSF10 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +DDX3X PIK3R1 2 9 6 656 24.296296296296298 1 0.006453010185367812 0.010813867957695717 2.1902376494061953 +DDX3X ADGRV1 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +DDX3X PRKDC 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +DDX3X KIAA1109 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +DDX3X LRP1 2 9 5 657 29.2 1 0.004883419242754512 0.00859509852352626 2.3112759898262483 +DDX3X MUC5AC 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +DDX3X MYH14 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +DDX3X MYO10 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +DDX3X RP1L1 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +DDX3X CELSR1 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +DDX3X CENPF 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +DDX3X DNHD1 1 10 6 656 10.933333333333334 1 0.10941817602080076 0.14713201495662012 0.960910529100715 +RYR2 ATM 4 6 6 657 73 1 4.984942973244604e-6 2.814080710702599e-5 5.302339805566337 +RYR2 DNAH14 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +RYR2 EGFR 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +RYR2 LRP1B 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +RYR2 PTEN 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +RYR2 STAG2 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +RYR2 PPM1D 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +RYR2 FSIP2 3 7 6 657 46.92857142857143 1 1.9009556704967375e-4 0.00045570855114647816 3.7210280105849125 +RYR2 FBN2 3 7 6 657 46.92857142857143 1 1.9009556704967375e-4 0.00045570855114647816 3.7210280105849125 +RYR2 IDH1 0 10 9 654 0 -1 1 1 0 +RYR2 KDM6A 2 8 7 656 23.428571428571427 1 0.006774744909196923 0.011245342159574838 2.1691070527212806 +RYR2 KRAS 1 9 8 655 9.097222222222221 1 0.12676168847721347 0.16715077328803715 0.8970119846012321 +RYR2 CCDC168 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +RYR2 KIAA1549 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +RYR2 PCLO 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +RYR2 MAGEL2 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +RYR2 PHLPP1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +RYR2 PTPRZ1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +RYR2 COL4A3 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +RYR2 IGSF10 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +RYR2 PIK3R1 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +RYR2 ADGRV1 5 5 2 661 330.5 1 4.610579139399188e-9 2.9726102346126345e-7 8.3362445190251009 +RYR2 PRKDC 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +RYR2 KIAA1109 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +RYR2 LRP1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +RYR2 MUC5AC 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +RYR2 MYH14 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +RYR2 MYO10 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +RYR2 RP1L1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +RYR2 CELSR1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +RYR2 CENPF 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +RYR2 DNHD1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +ATM DNAH14 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +ATM EGFR 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +ATM LRP1B 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +ATM PTEN 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +ATM STAG2 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +ATM PPM1D 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +ATM FSIP2 3 7 6 657 46.92857142857143 1 1.9009556704967375e-4 0.00045570855114647816 3.7210280105849125 +ATM FBN2 3 7 6 657 46.92857142857143 1 1.9009556704967375e-4 0.00045570855114647816 3.7210280105849125 +ATM IDH1 0 10 9 654 0 -1 1 1 0 +ATM KDM6A 2 8 7 656 23.428571428571427 1 0.006774744909196923 0.011245342159574838 2.1691070527212806 +ATM KRAS 0 10 9 654 0 -1 1 1 0 +ATM CCDC168 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +ATM KIAA1549 5 5 3 660 220 1 1.2218018601204577e-8 6.236280327698169e-7 7.91299921801606 +ATM PCLO 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +ATM MAGEL2 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +ATM PHLPP1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +ATM PTPRZ1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +ATM COL4A3 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +ATM IGSF10 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +ATM PIK3R1 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +ATM ADGRV1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +ATM PRKDC 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +ATM KIAA1109 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +ATM LRP1 5 5 2 661 330.5 1 4.610579139399188e-9 2.9726102346126345e-7 8.3362445190251009 +ATM MUC5AC 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +ATM MYH14 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +ATM MYO10 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +ATM RP1L1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +ATM CELSR1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +ATM CENPF 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +ATM DNHD1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +DNAH14 EGFR 4 6 6 657 73 1 4.984942973244604e-6 2.814080710702599e-5 5.302339805566337 +DNAH14 LRP1B 5 5 5 658 131.6 1 5.42946911479631e-8 2.2170332218751598e-6 7.265242632986852 +DNAH14 PTEN 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +DNAH14 STAG2 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +DNAH14 PPM1D 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +DNAH14 FSIP2 4 6 5 658 87.73333333333333 1 3.0126836604059634e-6 1.8269987544541114e-5 5.521046467979053 +DNAH14 FBN2 5 5 4 659 164.75 1 2.7318499938923443e-8 1.153971118109697e-6 7.563543151481494 +DNAH14 IDH1 0 10 9 654 0 -1 1 1 0 +DNAH14 KDM6A 2 8 7 656 23.428571428571427 1 0.006774744909196923 0.011245342159574838 2.1691070527212806 +DNAH14 KRAS 0 10 9 654 0 -1 1 1 0 +DNAH14 CCDC168 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +DNAH14 KIAA1549 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +DNAH14 PCLO 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +DNAH14 MAGEL2 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +DNAH14 PHLPP1 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +DNAH14 PTPRZ1 5 5 3 660 220 1 1.2218018601204577e-8 6.236280327698169e-7 7.91299921801606 +DNAH14 COL4A3 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +DNAH14 IGSF10 2 8 6 657 27.375 1 0.005311489499830866 0.009087394744822362 2.2747836727327617 +DNAH14 PIK3R1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +DNAH14 ADGRV1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 PRKDC 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 KIAA1109 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 LRP1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +DNAH14 MUC5AC 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 MYH14 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 MYO10 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 RP1L1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 CELSR1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +DNAH14 CENPF 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +DNAH14 DNHD1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +EGFR LRP1B 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +EGFR PTEN 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +EGFR STAG2 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +EGFR PPM1D 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +EGFR FSIP2 3 7 6 657 46.92857142857143 1 1.9009556704967375e-4 0.00045570855114647816 3.7210280105849125 +EGFR FBN2 4 6 5 658 87.73333333333333 1 3.0126836604059634e-6 1.8269987544541114e-5 5.521046467979053 +EGFR IDH1 0 10 9 654 0 -1 1 1 0 +EGFR KDM6A 1 9 8 655 9.097222222222221 1 0.12676168847721347 0.16715077328803715 0.8970119846012321 +EGFR KRAS 0 10 9 654 0 -1 1 1 0 +EGFR CCDC168 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +EGFR KIAA1549 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +EGFR PCLO 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +EGFR MAGEL2 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +EGFR PHLPP1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +EGFR PTPRZ1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +EGFR COL4A3 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +EGFR IGSF10 2 8 6 657 27.375 1 0.005311489499830866 0.009087394744822362 2.2747836727327617 +EGFR PIK3R1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +EGFR ADGRV1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR PRKDC 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +EGFR KIAA1109 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR LRP1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR MUC5AC 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR MYH14 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR MYO10 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR RP1L1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR CELSR1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR CENPF 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +EGFR DNHD1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +LRP1B PTEN 3 7 7 656 40.16326530612245 1 2.694286916538573e-4 6.000911768654093e-4 3.5695561578207062 +LRP1B STAG2 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +LRP1B PPM1D 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +LRP1B FSIP2 5 5 4 659 164.75 1 2.7318499938923443e-8 1.153971118109697e-6 7.563543151481494 +LRP1B FBN2 5 5 4 659 164.75 1 2.7318499938923443e-8 1.153971118109697e-6 7.563543151481494 +LRP1B IDH1 0 10 9 654 0 -1 1 1 0 +LRP1B KDM6A 1 9 8 655 9.097222222222221 1 0.12676168847721347 0.16715077328803715 0.8970119846012321 +LRP1B KRAS 0 10 9 654 0 -1 1 1 0 +LRP1B CCDC168 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +LRP1B KIAA1549 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +LRP1B PCLO 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +LRP1B MAGEL2 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +LRP1B PHLPP1 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +LRP1B PTPRZ1 5 5 3 660 220 1 1.2218018601204577e-8 6.236280327698169e-7 7.91299921801606 +LRP1B COL4A3 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +LRP1B IGSF10 2 8 6 657 27.375 1 0.005311489499830866 0.009087394744822362 2.2747836727327617 +LRP1B PIK3R1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +LRP1B ADGRV1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B PRKDC 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B KIAA1109 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B LRP1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +LRP1B MUC5AC 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B MYH14 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B MYO10 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B RP1L1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B CELSR1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +LRP1B CENPF 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +LRP1B DNHD1 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +PTEN STAG2 2 8 8 655 20.46875 1 0.008401073963582684 0.013559045593397615 2.0756651917186018 +PTEN PPM1D 4 6 6 657 73 1 4.984942973244604e-6 2.814080710702599e-5 5.302339805566337 +PTEN FSIP2 3 7 6 657 46.92857142857143 1 1.9009556704967375e-4 0.00045570855114647816 3.7210280105849125 +PTEN FBN2 3 7 6 657 46.92857142857143 1 1.9009556704967375e-4 0.00045570855114647816 3.7210280105849125 +PTEN IDH1 0 10 9 654 0 -1 1 1 0 +PTEN KDM6A 1 9 8 655 9.097222222222221 1 0.12676168847721347 0.16715077328803715 0.8970119846012321 +PTEN KRAS 0 10 9 654 0 -1 1 1 0 +PTEN CCDC168 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +PTEN KIAA1549 4 6 4 659 109.83333333333333 1 1.685854700198389e-6 1.140979009802777e-5 5.773179858905421 +PTEN PCLO 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +PTEN MAGEL2 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +PTEN PHLPP1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +PTEN PTPRZ1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +PTEN COL4A3 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +PTEN IGSF10 2 8 6 657 27.375 1 0.005311489499830866 0.009087394744822362 2.2747836727327617 +PTEN PIK3R1 3 7 5 658 56.4 1 1.277346059199172e-4 3.3011580643860455e-4 3.8936914275288808 +PTEN ADGRV1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +PTEN PRKDC 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +PTEN KIAA1109 4 6 3 660 146.66666666666666 1 8.490363593997929e-7 7.075302994998274e-6 6.0710737109944715 +PTEN LRP1 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +PTEN MUC5AC 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 4.094385837254872 +PTEN MYH14 3 7 4 659 70.60714285714286 1 8.046632421252267e-5 2.3809479990420353e-4 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3.675823216860851e-6 6.5450578669294055 +IGSF10 MUC5AC 2 6 5 660 44 1 0.002523655497465358 0.004845576778048689 2.5979699306328525 +IGSF10 MYH14 2 6 5 660 44 1 0.002523655497465358 0.004845576778048689 2.5979699306328525 +IGSF10 MYO10 2 6 5 660 44 1 0.002523655497465358 0.004845576778048689 2.5979699306328525 +IGSF10 RP1L1 2 6 5 660 44 1 0.002523655497465358 0.004845576778048689 2.5979699306328525 +IGSF10 CELSR1 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +IGSF10 CENPF 2 6 5 660 44 1 0.002523655497465358 0.004845576778048689 2.5979699306328525 +IGSF10 DNHD1 2 6 5 660 44 1 0.002523655497465358 0.004845576778048689 2.5979699306328525 +PIK3R1 ADGRV1 4 4 3 662 220.66666666666666 1 2.850638413075762e-7 3.675823216860851e-6 6.5450578669294055 +PIK3R1 PRKDC 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +PIK3R1 KIAA1109 4 4 3 662 220.66666666666666 1 2.850638413075762e-7 3.675823216860851e-6 6.5450578669294055 +PIK3R1 LRP1 4 4 3 662 220.66666666666666 1 2.850638413075762e-7 3.675823216860851e-6 6.5450578669294055 +PIK3R1 MUC5AC 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +PIK3R1 MYH14 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +PIK3R1 MYO10 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +PIK3R1 RP1L1 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +PIK3R1 CELSR1 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +PIK3R1 CENPF 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +PIK3R1 DNHD1 3 5 4 661 99.15 1 3.7891180586822474e-5 1.393894781347073e-4 4.42146186307141 +ADGRV1 PRKDC 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +ADGRV1 KIAA1109 5 2 2 664 830 1 3.8711579693625987e-10 5.927710640586479e-8 9.412159106174538 +ADGRV1 LRP1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +ADGRV1 MUC5AC 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +ADGRV1 MYH14 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +ADGRV1 MYO10 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +ADGRV1 RP1L1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +ADGRV1 CELSR1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +ADGRV1 CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +ADGRV1 DNHD1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +PRKDC KIAA1109 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +PRKDC LRP1 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +PRKDC MUC5AC 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +PRKDC MYH14 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +PRKDC MYO10 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +PRKDC RP1L1 5 2 2 664 830 1 3.8711579693625987e-10 5.927710640586479e-8 9.412159106174538 +PRKDC CELSR1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +PRKDC CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +PRKDC DNHD1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +KIAA1109 LRP1 5 2 2 664 830 1 3.8711579693625987e-10 5.927710640586479e-8 9.412159106174538 +KIAA1109 MUC5AC 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +KIAA1109 MYH14 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +KIAA1109 MYO10 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +KIAA1109 RP1L1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +KIAA1109 CELSR1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +KIAA1109 CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +KIAA1109 DNHD1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +LRP1 MUC5AC 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +LRP1 MYH14 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +LRP1 MYO10 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +LRP1 RP1L1 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +LRP1 CELSR1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +LRP1 CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +LRP1 DNHD1 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MUC5AC MYH14 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MUC5AC MYO10 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +MUC5AC RP1L1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +MUC5AC CELSR1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +MUC5AC CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MUC5AC DNHD1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +MYH14 MYO10 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MYH14 RP1L1 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MYH14 CELSR1 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MYH14 CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MYH14 DNHD1 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MYO10 RP1L1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +MYO10 CELSR1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +MYO10 CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +MYO10 DNHD1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +RP1L1 CELSR1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +RP1L1 CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +RP1L1 DNHD1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +CELSR1 CENPF 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 +CELSR1 DNHD1 4 3 3 663 294.6666666666667 1 1.4304678411152407e-7 2.9700391616375757e-6 6.844521901286321 +CENPF DNHD1 3 4 4 662 124.125 1 2.3788886807254447e-5 1.075327909184011e-4 4.6236258801476025 diff --git a/analyses/interaction-plots/results/gene_disease_top50.tsv b/analyses/interaction-plots/results/gene_disease_top50.tsv index e4f7eba02b..d33b5ea8b3 100644 --- a/analyses/interaction-plots/results/gene_disease_top50.tsv +++ b/analyses/interaction-plots/results/gene_disease_top50.tsv @@ -11,120 +11,99 @@ ATRX High-grade glioma 9 16 1.7777777777777777 EGFR High-grade glioma 9 14 1.5555555555555556 NF1 High-grade glioma 9 14 1.5555555555555556 DDX3X Medulloblastoma 9 10 1.1111111111111112 -OBSCN High-grade glioma 8 28 3.5 FGFR1 Low-grade astrocytic tumor 8 12 1.5 KMT2D Medulloblastoma 8 9 1.125 NF1 Diffuse midline glioma 7 10 1.4285714285714286 NF2 Meningioma 7 7 1 PPM1D Diffuse midline glioma 7 7 1 -TTN High-grade glioma 6 72 12 -DNAH8 High-grade glioma 6 12 2 +KIAA1109 High-grade glioma 6 14 2.3333333333333335 MAGEL2 High-grade glioma 6 10 1.6666666666666667 -TTN Medulloblastoma 6 8 1.3333333333333333 KDM6A Medulloblastoma 6 6 1 KMT2C Medulloblastoma 6 6 1 PTEN High-grade glioma 6 6 1 TP53 Medulloblastoma 6 6 1 -NEB High-grade glioma 5 24 4.8 RYR2 High-grade glioma 5 21 4.2 -SYNE1 High-grade glioma 5 20 4 FSIP2 High-grade glioma 5 18 3.6 -ABCA13 High-grade glioma 5 13 2.6 -DNAH5 High-grade glioma 5 13 2.6 +LRP1 High-grade glioma 5 13 2.6 KIAA1549 High-grade glioma 5 12 2.4 PCLO High-grade glioma 5 12 2.4 SETD2 High-grade glioma 5 12 2.4 SMARCA4 High-grade glioma 5 12 2.4 ATM High-grade glioma 5 11 2.2 +DNHD1 High-grade glioma 5 11 2.2 FBN2 High-grade glioma 5 9 1.8 -APOB High-grade glioma 5 8 1.6 BCOR High-grade glioma 5 7 1.4 BRAF High-grade glioma 5 6 1.2 PIK3CA High-grade glioma 5 6 1.2 SMARCA4 Medulloblastoma 5 6 1.2 -MUC16 Diffuse midline glioma 5 5 1 PDGFRA High-grade glioma 5 5 1 PIK3CA Low-grade astrocytic tumor 5 5 1 -PLEC High-grade glioma 4 31 7.75 -MUC16 High-grade glioma 4 16 4 +PIK3R1 High-grade glioma 5 5 1 KMT2D High-grade glioma 4 15 3.75 -DNAH17 High-grade glioma 4 14 3.5 -FAT1 High-grade glioma 4 13 3.25 +ADGRV1 High-grade glioma 4 13 3.25 +PRKDC High-grade glioma 4 13 3.25 CCDC168 High-grade glioma 4 12 3 +MYH14 High-grade glioma 4 12 3 KMT2C High-grade glioma 4 11 2.75 +MYO10 High-grade glioma 4 11 2.75 +CENPF High-grade glioma 4 10 2.5 DNAH14 High-grade glioma 4 10 2.5 LRP1B High-grade glioma 4 9 2.25 +PTPRZ1 High-grade glioma 4 7 1.75 BCOR Low-grade astrocytic tumor 4 4 1 +COL4A3 High-grade glioma 4 4 1 H3F3A High-grade glioma 4 4 1 +IGSF10 High-grade glioma 4 4 1 NF1 Low-grade astrocytic tumor 4 4 1 PTPN11 Diffuse midline glioma 4 4 1 -TTN Diffuse midline glioma 4 4 1 -RYR1 High-grade glioma 3 15 5 -DNAH3 High-grade glioma 3 10 3.3333333333333335 +MUC5AC High-grade glioma 3 11 3.6666666666666665 +RP1L1 High-grade glioma 3 10 3.3333333333333335 +CELSR1 High-grade glioma 3 9 3 PHLPP1 High-grade glioma 3 7 2.3333333333333335 -DNAH11 High-grade glioma 3 6 2 PTPN11 High-grade glioma 3 6 2 FGFR1 High-grade glioma 3 4 1.3333333333333333 NF2 Ependymoma 3 4 1.3333333333333333 NF2 Schwannoma 3 4 1.3333333333333333 PTEN Diffuse midline glioma 3 4 1.3333333333333333 -DNAH5 Diffuse midline glioma 3 3 1 IDH1 High-grade glioma 3 3 1 IDH1 Low-grade astrocytic tumor 3 3 1 KRAS Low-grade astrocytic tumor 3 3 1 -MUC16 Low-grade astrocytic tumor 3 3 1 PIK3CA Diffuse midline glioma 3 3 1 PPM1D High-grade glioma 3 3 1 -RYR1 Diffuse midline glioma 3 3 1 STAG2 Medulloblastoma 3 3 1 PDGFRA Dysembryoplastic neuroepithelial tumor 2 4 2 PDGFRA Low-grade astrocytic tumor 2 4 2 FGFR1 Dysembryoplastic neuroepithelial tumor 2 3 1.5 -RYR1 Medulloblastoma 2 3 1.5 STAG2 Ewings Sarcoma 2 3 1.5 -APOB Diffuse midline glioma 2 2 1 ATM Low-grade astrocytic tumor 2 2 1 BRAF Diffuse midline glioma 2 2 1 +CENPF CNS Embryonal Tumor 2 2 1 DDX3X High-grade glioma 2 2 1 -DNAH11 Diffuse midline glioma 2 2 1 DNAH14 Diffuse midline glioma 2 2 1 DNAH14 Medulloblastoma 2 2 1 -DNAH3 Medulloblastoma 2 2 1 FBN2 Medulloblastoma 2 2 1 IDH1 Ganglioglioma 2 2 1 +IGSF10 Medulloblastoma 2 2 1 KDM6A High-grade glioma 2 2 1 KRAS Ganglioglioma 2 2 1 KRAS Germinoma 2 2 1 KRAS Neurofibroma 2 2 1 LRP1B Ganglioglioma 2 2 1 PDGFRA Diffuse midline glioma 2 2 1 -RYR1 Low-grade astrocytic tumor 2 2 1 +PIK3R1 Low-grade astrocytic tumor 2 2 1 RYR2 Medulloblastoma 2 2 1 SETD2 Medulloblastoma 2 2 1 STAG2 High-grade glioma 2 2 1 STAG2 Low-grade astrocytic tumor 2 2 1 TP53 Low-grade astrocytic tumor 2 2 1 -TTN Craniopharyngioma 2 2 1 -DNAH17 Diffuse midline glioma 1 2 2 -DNAH3 Neurofibroma 1 2 2 FBN2 Neuroblastoma 1 2 2 FGFR1 Dysplasia 1 2 2 FGFR1 Glial-neuronal tumor NOS 1 2 2 -MUC16 Neuroblastoma 1 2 2 NF2 High-grade glioma 1 2 2 -PLEC Ependymoma 1 2 2 PTEN Medulloblastoma 1 2 2 -RYR1 CNS Neuroblastoma 1 2 2 -SYNE1 Neuroblastoma 1 2 2 -TTN Neuroblastoma 1 2 2 -ABCA13 Choroid plexus papilloma 1 1 1 -ABCA13 CNS Embryonal Tumor 1 1 1 -ABCA13 Medulloblastoma 1 1 1 -ABCA13 Meningioma 1 1 1 -ABCA13 Metastatic secondary tumors 1 1 1 -ABCA13 Neuroblastoma 1 1 1 -APOB Craniopharyngioma 1 1 1 -APOB Neuroblastoma 1 1 1 +ADGRV1 Low-grade astrocytic tumor 1 1 1 +ADGRV1 Medulloblastoma 1 1 1 +ADGRV1 Neuroblastoma 1 1 1 ATM CNS Embryonal Tumor 1 1 1 ATM Diffuse midline glioma 1 1 1 ATM Medulloblastoma 1 1 1 @@ -141,32 +120,22 @@ CCDC168 Atypical Teratoid Rhabdoid Tumor 1 1 1 CCDC168 Craniopharyngioma 1 1 1 CCDC168 Diffuse midline glioma 1 1 1 CCDC168 Germinoma 1 1 1 +CELSR1 Diffuse midline glioma 1 1 1 +CELSR1 Medulloblastoma 1 1 1 +CELSR1 Metastatic secondary tumors 1 1 1 +CELSR1 Neuroblastoma 1 1 1 +CENPF Low-grade astrocytic tumor 1 1 1 +COL4A3 Atypical Teratoid Rhabdoid Tumor 1 1 1 +COL4A3 CNS Neuroblastoma 1 1 1 +COL4A3 Diffuse midline glioma 1 1 1 +COL4A3 Neurofibroma 1 1 1 CTNNB1 CNS Embryonal Tumor 1 1 1 CTNNB1 High-grade glioma 1 1 1 -DNAH11 Hemangioblastoma 1 1 1 -DNAH11 Medulloblastoma 1 1 1 -DNAH11 Neuroblastoma 1 1 1 DNAH14 Low-grade astrocytic tumor 1 1 1 DNAH14 Neuroblastoma 1 1 1 -DNAH17 Low-grade astrocytic tumor 1 1 1 -DNAH17 Medulloblastoma 1 1 1 -DNAH17 Neuroblastoma 1 1 1 -DNAH3 Diffuse midline glioma 1 1 1 -DNAH3 Neuroblastoma 1 1 1 -DNAH5 Atypical Teratoid Rhabdoid Tumor 1 1 1 -DNAH5 Low-grade astrocytic tumor 1 1 1 -DNAH5 Meningioma 1 1 1 -DNAH5 Metastatic secondary tumors 1 1 1 -DNAH5 Neuroblastoma 1 1 1 -DNAH5 Neurofibroma 1 1 1 -DNAH8 Low-grade astrocytic tumor 1 1 1 -DNAH8 Neuroblastoma 1 1 1 -DNAH8 Oligodendroglioma 1 1 1 +DNHD1 Medulloblastoma 1 1 1 +DNHD1 Neuroblastoma 1 1 1 EGFR Diffuse midline glioma 1 1 1 -FAT1 Diffuse midline glioma 1 1 1 -FAT1 Ependymoma 1 1 1 -FAT1 Low-grade astrocytic tumor 1 1 1 -FAT1 Medulloblastoma 1 1 1 FBN2 Low-grade astrocytic tumor 1 1 1 FGFR1 Oligodendroglioma 1 1 1 FSIP2 CNS Neuroblastoma 1 1 1 @@ -174,7 +143,10 @@ FSIP2 Embryonal tumor with multilayer rosettes 1 1 1 FSIP2 Metastatic secondary tumors 1 1 1 FSIP2 Neuroblastoma 1 1 1 IDH1 Oligodendroglioma 1 1 1 +IGSF10 Diffuse midline glioma 1 1 1 +IGSF10 Pineoblastoma 1 1 1 KDM6A Low-grade astrocytic tumor 1 1 1 +KIAA1109 Neuroblastoma 1 1 1 KIAA1549 CNS Embryonal Tumor 1 1 1 KIAA1549 Ependymoma 1 1 1 KIAA1549 Medulloblastoma 1 1 1 @@ -182,18 +154,24 @@ KMT2C Atypical Teratoid Rhabdoid Tumor 1 1 1 KMT2C Neuroblastoma 1 1 1 KMT2D Craniopharyngioma 1 1 1 KMT2D Primary CNS lymphoma 1 1 1 +LRP1 Craniopharyngioma 1 1 1 +LRP1 Diffuse midline glioma 1 1 1 LRP1B Atypical Teratoid Rhabdoid Tumor 1 1 1 LRP1B Metastatic secondary tumors 1 1 1 LRP1B Neuroblastoma 1 1 1 LRP1B Sarcoma 1 1 1 MAGEL2 Medulloblastoma 1 1 1 MAGEL2 Rosai-Dorfman Disease 1 1 1 -MUC16 Dysembryoplastic neuroepithelial tumor 1 1 1 -MUC16 Medulloblastoma 1 1 1 -NEB CNS Neuroblastoma 1 1 1 -NEB Ependymoma 1 1 1 -NEB Medulloblastoma 1 1 1 -NEB Neuroblastoma 1 1 1 +MUC5AC Diffuse midline glioma 1 1 1 +MUC5AC Ependymoma 1 1 1 +MUC5AC Ewings Sarcoma 1 1 1 +MUC5AC Neuroblastoma 1 1 1 +MYH14 CNS Embryonal Tumor 1 1 1 +MYH14 CNS Neuroblastoma 1 1 1 +MYH14 Medulloblastoma 1 1 1 +MYO10 Ependymoma 1 1 1 +MYO10 Medulloblastoma 1 1 1 +MYO10 Neuroblastoma 1 1 1 NF1 Dysembryoplastic neuroepithelial tumor 1 1 1 NF1 Dysplasia 1 1 1 NF1 Ganglioglioma 1 1 1 @@ -201,9 +179,6 @@ NF1 Germinoma 1 1 1 NF1 Neuroblastoma 1 1 1 NF2 Medulloblastoma 1 1 1 NF2 Sarcoma 1 1 1 -OBSCN CNS Neuroblastoma 1 1 1 -OBSCN Diffuse midline glioma 1 1 1 -OBSCN Neuroblastoma 1 1 1 PCLO Craniopharyngioma 1 1 1 PCLO Medulloblastoma 1 1 1 PCLO Neuroblastoma 1 1 1 @@ -214,14 +189,22 @@ PHLPP1 Neuroblastoma 1 1 1 PHLPP1 Teratoma 1 1 1 PIK3CA Craniopharyngioma 1 1 1 PIK3CA Medulloblastoma 1 1 1 -PLEC Atypical Teratoid Rhabdoid Tumor 1 1 1 -PLEC CNS Neuroblastoma 1 1 1 -PLEC Diffuse midline glioma 1 1 1 +PIK3R1 Diffuse midline glioma 1 1 1 +PRKDC Ependymoma 1 1 1 +PRKDC Medulloblastoma 1 1 1 +PRKDC Neuroblastoma 1 1 1 PTPN11 Dysembryoplastic neuroepithelial tumor 1 1 1 PTPN11 Low-grade astrocytic tumor 1 1 1 PTPN11 Metastatic secondary tumors 1 1 1 PTPN11 Oligodendroglioma 1 1 1 -RYR1 Sarcoma 1 1 1 +PTPRZ1 Ependymoma 1 1 1 +PTPRZ1 Low-grade astrocytic tumor 1 1 1 +PTPRZ1 Metastatic secondary tumors 1 1 1 +PTPRZ1 Neuroblastoma 1 1 1 +RP1L1 CNS Embryonal Tumor 1 1 1 +RP1L1 Diffuse midline glioma 1 1 1 +RP1L1 Medulloblastoma 1 1 1 +RP1L1 Neuroblastoma 1 1 1 RYR2 Diffuse midline glioma 1 1 1 RYR2 Ependymoma 1 1 1 RYR2 Low-grade astrocytic tumor 1 1 1 @@ -232,12 +215,5 @@ SETD2 Low-grade astrocytic tumor 1 1 1 SMARCA4 Craniopharyngioma 1 1 1 SMARCA4 Low-grade astrocytic tumor 1 1 1 STAG2 Ependymoma 1 1 1 -SYNE1 Medulloblastoma 1 1 1 -SYNE1 Meningioma 1 1 1 -SYNE1 Sarcoma 1 1 1 TP53 Myeloid Sarcoma 1 1 1 TP53 Oligodendroglioma 1 1 1 -TTN CNS Embryonal Tumor 1 1 1 -TTN CNS Neuroblastoma 1 1 1 -TTN Dysembryoplastic neuroepithelial tumor 1 1 1 -TTN Neurofibroma 1 1 1 diff --git a/analyses/interaction-plots/scripts/02-process_mutations.R b/analyses/interaction-plots/scripts/02-process_mutations.R index 2fb5ae767f..d8712568b2 100644 --- a/analyses/interaction-plots/scripts/02-process_mutations.R +++ b/analyses/interaction-plots/scripts/02-process_mutations.R @@ -91,7 +91,8 @@ option_list <- list( "..", "..", "data", "independent-specimens.wgs.primary.tsv" ), - help = "File path to MAF file to be analyzed. Can be .gz compressed.", + help = "File path of specimen list file to be analyzed. + A tsv file which must contain a column named 'Kids_First_Biospecimen_ID`", metavar = "character" ), make_option( @@ -103,6 +104,13 @@ option_list <- list( calculated and will appear in the resulting figure.", metavar = "character" ), + make_option( + opt_str = "--exclude_genes", + type = "character", + default = NA, + help = "File path with a table of genes to be excluded from the figure. + A tsv file which must contain a column named 'gene` that contains Hugo Symbols" + ), make_option( opt_str = "--min_mutated", type = "numeric", @@ -160,6 +168,10 @@ if (!is.na(opts$specimen_list)) { specimen_file <- opts$specimen_list } +if (!is.na(opts$exclude_genes)) { + exclude_file <- opts$exclude_genes +} + #### Read files @@ -170,6 +182,9 @@ meta_df <- data.table::fread(meta_file, data.table = FALSE) if (exists("specimen_file")) { specimen_df <- data.table::fread(specimen_file, data.table = FALSE) } +if (exists("exclude_file")) { + exclude_df <- data.table::fread(exclude_file, data.table = FALSE) +} @@ -202,7 +217,11 @@ if (exists("specimen_df")) { } else { samples <- unique(maf_df$Tumor_Sample_Barcode) } + genes <- unique(maf_df$Hugo_Symbol) +if (exists("exclude_df")){ + genes <- genes[!genes %in% exclude_df$gene] +} # reduce metadata to only chosen samples sample_meta <- meta_df %>% @@ -275,12 +294,12 @@ maf_filtered <- maf_df %>% # count mutations by gene/sample pair gene_sample_counts <- maf_filtered %>% - dplyr::filter(Entrez_Gene_Id > 0) %>% # remove unknowns + dplyr::filter(Entrez_Gene_Id > 0, # remove unknowns + Hugo_Symbol %in% genes) %>% # include only desired genes dplyr::group_by(gene = Hugo_Symbol, sample = Tumor_Sample_Barcode) %>% dplyr::tally(name = "mutations") %>% dplyr::ungroup() - # count # of samples mutated by gene gene_counts <- gene_sample_counts %>% dplyr::group_by(gene) %>% @@ -298,7 +317,6 @@ gene_counts <- gene_sample_counts %>% dplyr::row_number() <= 2) # keep at least 2 genes - # get most often mutated genes top_count_genes <- head(gene_counts, opts$max_genes)$gene diff --git a/analyses/interaction-plots/scripts/03-plot_interactions.R b/analyses/interaction-plots/scripts/03-plot_interactions.R index 168a0cabe4..d0ee67d6d5 100644 --- a/analyses/interaction-plots/scripts/03-plot_interactions.R +++ b/analyses/interaction-plots/scripts/03-plot_interactions.R @@ -258,7 +258,7 @@ cooccur_plot2 <- cooccur_plot + labels = ylabels ) + theme( - plot.margin = unit(c(-3,0,0,0), "char") # negative top margin to move plots together + plot.margin = unit(c(-3.5,0,0,0), "char") # negative top margin to move plots together ) # Move labels and themes for disease plot @@ -278,7 +278,8 @@ disease_plot2 <- disease_plot + # Layout of the two plots will be one over the other (1 column), # with the upper plot 3/4 the height of the lower plot combined_plot <- disease_plot2 + cooccur_plot2 + - plot_layout(ncol = 1, heights = c(3, 4)) & + plot_layout(ncol = 1, heights = c(3, 4)) + + plot_annotation(tag_levels = "A") & theme( # add uniform labels axis.text.x = element_text(size = 9), axis.text.y = element_text(size = 9) diff --git a/figures/README.md b/figures/README.md index 0437f9cb64..1d519b0fd3 100644 --- a/figures/README.md +++ b/figures/README.md @@ -27,7 +27,7 @@ You may choose to use [`docker exec`](https://docs.docker.com/engine/reference/c This script runs **_all_** the intermediate steps needed to generate figures starting with the original data files. ``` -bash scripts/run-figures.sh +bash scripts/generate-figures.sh ``` Figures are saved to the `figures/pngs` folder and will be linked to the accompanying manuscript repository [`AlexsLemonade/OpenPBTA-manuscript`](https://github.com/AlexsLemonade/OpenPBTA-manuscript/). diff --git a/figures/generate-figures.sh b/figures/generate-figures.sh new file mode 100644 index 0000000000..b3953b5f99 --- /dev/null +++ b/figures/generate-figures.sh @@ -0,0 +1,54 @@ +#!/bin/bash +# +# Run all figure making scripts. + +# Find current directory based on this script +WORKDIR=$(dirname "${BASH_SOURCE[0]}") +cd "$WORKDIR" + +# Get base directory of project +cd .. +BASEDIR="$(pwd)" +cd - + +analyses_dir="$BASEDIR/analyses" + +# Make output folders for all figures +mkdir -p pngs + +## Sample distribution + +################ Mutational landscape figure +# Run both SNV caller consensus scripts +# Note: This the PBTA consensus script requires at least 128 MB of RAM to run +# These scripts are intended to run from the base directory, +# so we will temporarily move there +cd $BASEDIR +bash ${analyses_dir}/snv-callers/run_caller_consensus_analysis-pbta.sh +bash ${analyses_dir}/snv-callers/run_caller_consensus_analysis-tcga.sh +cd $WORKDIR + +# Run mutational signatures analysis +Rscript -e "rmarkdown::render('../analyses/mutational-signatures/mutational_signatures.Rmd', clean = TRUE)" + +# Run the figure assembly +Rscript scripts/fig2-mutational-landscape.R + +###################### +## Interaction plots + +# Run the main figure generation script +bash ${analyses_dir}/interaction-plots/01-create-interaction-plots.sh + +# Copy the main figure to final directory +cp ${analyses_dir}/interaction-plots/plots/combined_top50.png pngs/mutation_cooccurrence_figure.png + + + + + +## Oncoprint plot(s) + +## Copy number status heatmap + +## Transcriptomic overview diff --git a/figures/pngs/combined_top50.png b/figures/pngs/combined_top50.png new file mode 100644 index 0000000000..cb9d18b489 Binary files /dev/null and b/figures/pngs/combined_top50.png differ diff --git a/figures/run-figures.sh b/figures/run-figures.sh deleted file mode 100644 index b87158c754..0000000000 --- a/figures/run-figures.sh +++ /dev/null @@ -1,31 +0,0 @@ -#!/bin/bash -# -# Run all figure making scripts. - -# Find current directory based on this script -cd "$(dirname "${BASH_SOURCE[0]}")" - -# Make an output folder for all directories -mkdir -p pngs - -## Sample distribution - -################ Mutational landscape figure -# Run both SNV caller consensus scripts -# Note: This the PBTA consensus script requires at least 128 MB of RAM to run -bash ../analyses/snv-callers/run_caller_consensus_analysis-pbta.sh -bash ../analyses/snv-callers/run_caller_consensus_analysis-tcga.sh - -# Run mutational signatures analysis -Rscript -e "rmarkdown::render('../analyses/mutational-signatures/mutational_signatures.Rmd', clean = TRUE)" - -# Run the figure assembly -Rscript scripts/fig2-mutational-landscape.R - -## Interaction plots - -## Oncoprint plot(s) - -## Copy number status heatmap - -## Transcriptomic overview