From be1d5b035be3b1363502743e4f92e88e6a4495f8 Mon Sep 17 00:00:00 2001
From: Ally Hawkins <ally.hawkins@ccdatalab.org>
Date: Mon, 8 Jul 2024 13:25:04 -0500
Subject: [PATCH] make sure formatting is correct

---
 .../qc_report/celltypes_supplemental_report.rmd  | 16 +++++++++-------
 templates/qc_report/main_qc_report.rmd           | 10 +++++-----
 2 files changed, 14 insertions(+), 12 deletions(-)

diff --git a/templates/qc_report/celltypes_supplemental_report.rmd b/templates/qc_report/celltypes_supplemental_report.rmd
index 3ae16499..269019f3 100644
--- a/templates/qc_report/celltypes_supplemental_report.rmd
+++ b/templates/qc_report/celltypes_supplemental_report.rmd
@@ -396,13 +396,15 @@ if (!has_multiplex) {
   print_sample_metadata(processed_meta)
 } else {
   # otherwise print out an info box that no sample metadata will be displayed
-  knitr::asis_output(glue::glue("
-  <div class=\"alert alert-info\">
-
-  This library is multiplexed and contains data from more than one sample.
-  Demultiplexing has not been performed, so sample metadata will not be displayed.
-  </div>
-"))
+  knitr::asis_output(
+    glue::glue("
+      <div class=\"alert alert-info\">
+
+      This library is multiplexed and contains data from more than one sample.
+      Demultiplexing has not been performed, so sample metadata will not be displayed.
+      </div>
+    ")
+  )
 }
 ```
 
diff --git a/templates/qc_report/main_qc_report.rmd b/templates/qc_report/main_qc_report.rmd
index 18838892..e9f7351e 100644
--- a/templates/qc_report/main_qc_report.rmd
+++ b/templates/qc_report/main_qc_report.rmd
@@ -242,12 +242,12 @@ if (!has_multiplex) {
   # otherwise print out an info box that no sample metadata will be displayed
   knitr::asis_output(
     glue::glue("
-  <div class=\"alert alert-info\">
+      <div class=\"alert alert-info\">
 
-  This library is multiplexed and contains data from more than one sample.
-  Demultiplexing has not been performed, so sample metadata will not be displayed.
-  </div>
-")
+      This library is multiplexed and contains data from more than one sample.
+      Demultiplexing has not been performed, so sample metadata will not be displayed.
+      </div>
+    ")
   )
 }
 ```