From cf83232702dcbe2f8e2e6022021e37974be174cb Mon Sep 17 00:00:00 2001
From: Ally Hawkins <ally.hawkins@ccdatalab.org>
Date: Mon, 5 Aug 2024 09:34:40 -0500
Subject: [PATCH] only count single-cell libraries

---
 merge.nf | 1 +
 1 file changed, 1 insertion(+)

diff --git a/merge.nf b/merge.nf
index bedb77ed..c36819fc 100644
--- a/merge.nf
+++ b/merge.nf
@@ -163,6 +163,7 @@ workflow {
       .map{it.unique()}
 
     oversized_projects = libraries_ch
+      .filter{it.technology.startsWith("10X")} // only count single-cell or single-nuclei libraries, no cell hash, ADT, bulk or spatial
       .map{[
         it.project_id, // pull out project id for grouping
         it