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book.bib
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@Book{xie2015,
title = {Dynamic Documents with {R} and knitr},
author = {Yihui Xie},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2015},
edition = {2nd},
note = {ISBN 978-1498716963},
url = {http://yihui.org/knitr/},
}
@article{vannes2003,
title = {Charisma: a spatial explicit simulation model of submerged macrophytes},
author = {{van Nes}, {Egbert H.} and {Scheffer}, {Marten} and {van den Berg}, {Marcel S.} and {Coops}, {Hugo}},
year = {2003},
month = {01},
date = {2003-01-15},
journal = {Ecological Modelling},
pages = {103--116},
volume = {159},
number = {2},
doi = {10.1016/S0304-3800(02)00275-2},
url = {http://www.sciencedirect.com/science/article/pii/S0304380002002752}
}
@article{vedder2021,
title = {Dealing with software complexity in individual{-}based models},
author = {{Vedder}, {Daniel} and {Ankenbrand}, {Markus} and {Sarmento Cabral}, {Juliano}},
year = {2021},
month = {09},
date = {2021-09-18},
journal = {Methods in Ecology and Evolution},
pages = {2324--2333},
volume = {12},
number = {12},
doi = {10.1111/2041-210x.13716},
url = {http://dx.doi.org/10.1111/2041-210X.13716},
langid = {en}
}
@article{saltelli2002,
title = {Sensitivity Analysis in Practice},
author = {{Saltelli}, {Andrea} and {Tarantola}, {Stefano} and {Campolongo}, {Francesca} and {Ratto}, {Marco}},
year = {2002},
month = {02},
date = {2002-02-24},
doi = {10.1002/0470870958},
url = {http://dx.doi.org/10.1002/0470870958}
}
@article{hao2019,
title = {A review of evidence about use and performance of species distribution modelling ensembles like BIOMOD},
author = {{Hao}, {Tianxiao} and {Elith}, {Jane} and {Guillera{-}Arroita}, {Gurutzeta} and {Lahoz{-}Monfort}, {José J.}},
editor = {{Serra{-}Diaz}, {Josep}},
year = {2019},
month = {01},
date = {2019-01-22},
journal = {Diversity and Distributions},
pages = {839--852},
volume = {25},
number = {5},
doi = {10.1111/ddi.12892},
url = {http://dx.doi.org/10.1111/ddi.12892},
langid = {en}
}
@article{zurell2020,
title = {A standard protocol for reporting species distribution models},
author = {{Zurell}, {Damaris} and {Franklin}, {Janet} and {König}, {Christian} and {Bouchet}, {Phil J.} and {Dormann}, {Carsten F.} and {Elith}, {Jane} and {Fandos}, {Guillermo} and {Feng}, {Xiao} and {Guillera{-}Arroita}, {Gurutzeta} and {Guisan}, {Antoine} and {Lahoz{-}Monfort}, {José J.} and {Leitão}, {Pedro J.} and {Park}, {Daniel S.} and {Peterson}, {A. Townsend} and {Rapacciuolo}, {Giovanni} and {Schmatz}, {Dirk R.} and {Schröder}, {Boris} and {Serra{-}Diaz}, {Josep M.} and {Thuiller}, {Wilfried} and {Yates}, {Katherine L.} and {Zimmermann}, {Niklaus E.} and {Merow}, {Cory}},
year = {2020},
month = {06},
date = {2020-06},
journal = {Ecography},
pages = {1261--1277},
volume = {43},
number = {9},
doi = {10.1111/ecog.04960},
url = {http://dx.doi.org/10.1111/ecog.04960},
langid = {en}
}
@article{kramer-schadt2013,
title = {The importance of correcting for sampling bias in MaxEnt species distribution models},
author = {{Kramer-Schadt}, {Stephanie} and {Niedballa}, {Jürgen} and {Pilgrim}, {John D.} and {Schröder}, {Boris} and {Lindenborn}, {Jana} and {Reinfelder}, {Vanessa} and {Stillfried}, {Milena} and {Heckmann}, {Ilja} and {Scharf}, {Anne K.} and {Augeri}, {Dave M.} and {Cheyne}, {Susan M.} and {Hearn}, {Andrew J.} and {Ross}, {Joanna} and {Macdonald}, {David W.} and {Mathai}, {John} and {Eaton}, {James} and {Marshall}, {Andrew J.} and {Semiadi}, {Gono} and {Rustam}, {Rustam} and {Bernard}, {Henry} and {Alfred}, {Raymond} and {Samejima}, {Hiromitsu} and {Duckworth}, {J. W.} and {Breitenmoser-Wuersten}, {Christine} and {Belant}, {Jerrold L.} and {Hofer}, {Heribert} and {Wilting}, {Andreas}},
editor = {{Robertson}, {Mark}},
year = {2013},
month = {07},
date = {2013-07-02},
journal = {Diversity and Distributions},
pages = {1366--1379},
volume = {19},
number = {11},
doi = {10.1111/ddi.12096},
url = {http://dx.doi.org/10.1111/ddi.12096},
langid = {en}
}
@article{wright2005,
title = {Assessing the generality of global leaf trait relationships},
author = {{Wright}, {Ian J.} and {Reich}, {Peter B.} and {Cornelissen}, {Johannes H. C.} and {Falster}, {Daniel S.} and {Garnier}, {Eric} and {Hikosaka}, {Kouki} and {Lamont}, {Byron B.} and {Lee}, {William} and {Oleksyn}, {Jacek} and {Osada}, {Noriyuki} and {Poorter}, {Hendrik} and {Villar}, {Rafael} and {Warton}, {David I.} and {Westoby}, {Mark}},
year = {2005},
month = {02},
date = {2005-02-03},
journal = {New Phytologist},
pages = {485--496},
volume = {166},
number = {2},
doi = {10.1111/j.1469-8137.2005.01349.x},
url = {http://dx.doi.org/10.1111/j.1469-8137.2005.01349.x},
langid = {en}
}
@article{grimm2010,
title = {The ODD protocol: A review and first update},
author = {{Grimm}, {Volker} and {Berger}, {Uta} and {DeAngelis}, {Donald L.} and {Polhill}, {J. Gary} and {Giske}, {Jarl} and {Railsback}, {Steven F.}},
year = {2010},
month = {11},
date = {2010-11},
journal = {Ecological Modelling},
pages = {2760--2768},
volume = {221},
number = {23},
doi = {10.1016/j.ecolmodel.2010.08.019},
url = {http://linkinghub.elsevier.com/retrieve/pii/S030438001000414X},
langid = {en}
}
@article{grimm2014,
title = {Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE},
author = {{Grimm}, {Volker} and {Augusiak}, {Jacqueline} and {Focks}, {Andreas} and {Frank}, {Béatrice M.} and {Gabsi}, {Faten} and {Johnston}, {Alice S.A.} and {Liu}, {Chun} and {Martin}, {Benjamin T.} and {Meli}, {Mattia} and {Radchuk}, {Viktoriia} and {Thorbek}, {Pernille} and {Railsback}, {Steven F.}},
year = {2014},
month = {05},
date = {2014-05},
journal = {Ecological Modelling},
pages = {129--139},
volume = {280},
doi = {10.1016/j.ecolmodel.2014.01.018},
url = {https://linkinghub.elsevier.com/retrieve/pii/S0304380014000611},
langid = {en}
}
@article{campolongo2007,
title = {An effective screening design for sensitivity analysis of large models},
author = {{Campolongo}, {Francesca} and {Cariboni}, {Jessica} and {Saltelli}, {Andrea}},
year = {2007},
month = {10},
date = {2007-10},
journal = {Environmental Modelling & Software},
pages = {1509--1518},
volume = {22},
number = {10},
doi = {10.1016/j.envsoft.2006.10.004},
url = {http://dx.doi.org/10.1016/j.envsoft.2006.10.004},
langid = {en}
}
@article{leroy2015,
title = {virtualspecies, an R package to generate virtual species distributions},
author = {{Leroy}, {Boris} and {Meynard}, {Christine N.} and {Bellard}, {Céline} and {Courchamp}, {Franck}},
year = {2015},
month = {06},
date = {2015-06-15},
journal = {Ecography},
pages = {599--607},
volume = {39},
number = {6},
doi = {10.1111/ecog.01388},
url = {http://dx.doi.org/10.1111/ecog.01388},
langid = {en}
}