diff --git a/.github/workflows/test.yaml b/.github/workflows/test.yaml index 6c6b6a292b..d93c6c0364 100644 --- a/.github/workflows/test.yaml +++ b/.github/workflows/test.yaml @@ -14,7 +14,7 @@ on: env: - TEST_RUNNER_PYTHON_VERSION: 3.9 + TEST_RUNNER_PYTHON_VERSION: 3.11 jobs: postgres-tests: diff --git a/containers/alerts/Dockerfile b/containers/alerts/Dockerfile index e7a9e7a760..e36db04a5e 100644 --- a/containers/alerts/Dockerfile +++ b/containers/alerts/Dockerfile @@ -1,7 +1,11 @@ -FROM python:3.10-slim +FROM python:3.11-slim WORKDIR /code +RUN apt-get update && \ + apt-get upgrade -y && \ + apt-get install -y git + COPY ./requirements.txt /code/requirements.txt RUN pip install -r requirements.txt diff --git a/containers/alerts/requirements.txt b/containers/alerts/requirements.txt index 235e737700..8f8dc1ad14 100644 --- a/containers/alerts/requirements.txt +++ b/containers/alerts/requirements.txt @@ -3,9 +3,9 @@ azure-communication-phonenumbers azure-communication-sms azure-identity typing_extensions==4.5.0 -pydantic==1.9.0 -fastapi==0.95.0 -phdi +pydantic==1.10.9 +fastapi==0.96.0 +phdi @ git+https://github.com/CDCgov/phdi@updatepython uvicorn httpx slack_sdk diff --git a/containers/fhir-converter/requirements.txt b/containers/fhir-converter/requirements.txt index 9e2112ee07..676abd6d90 100644 --- a/containers/fhir-converter/requirements.txt +++ b/containers/fhir-converter/requirements.txt @@ -6,10 +6,10 @@ charset-normalizer==2.1.0 click==8.1.3 dnspython==2.2.1 email-validator==1.2.1 -fastapi==0.92.0 +fastapi==0.96.0 h11==0.13.0 httpcore==0.17.0 -httptools==0.4.0 +httptools==0.5.0 httpx==0.24.0 idna==3.3 iniconfig==1.1.1 @@ -20,7 +20,7 @@ orjson==3.7.11 packaging==21.3 pluggy==1.0.0 py==1.11.0 -pydantic==1.9.1 +pydantic==1.10.9 pyparsing==3.0.9 pytest==7.1.2 python-dotenv==0.20.0 @@ -29,13 +29,13 @@ PyYAML==6.0 requests==2.28.1 six==1.16.0 sniffio==1.2.0 -starlette==0.25.0 +starlette==0.27.0 tomli==2.0.1 typing_extensions==4.3.0 ujson==5.4.0 urllib3==1.26.11 uvicorn==0.17.6 -uvloop==0.16.0 +uvloop==0.17.0 watchgod==0.8.2 websockets==10.3 uuid diff --git a/containers/ingestion/Dockerfile b/containers/ingestion/Dockerfile index ea8b366b71..5441f987cf 100644 --- a/containers/ingestion/Dockerfile +++ b/containers/ingestion/Dockerfile @@ -1,7 +1,11 @@ -FROM python:3.10-slim +FROM python:3.11-slim WORKDIR /code +RUN apt-get update && \ + apt-get upgrade -y && \ + apt-get install -y git + COPY ./requirements.txt /code/requirements.txt RUN pip install -r requirements.txt diff --git a/containers/ingestion/requirements.txt b/containers/ingestion/requirements.txt index 70420356fa..164d1e5d29 100644 --- a/containers/ingestion/requirements.txt +++ b/containers/ingestion/requirements.txt @@ -1,6 +1,6 @@ -typing_extensions==4.5.0 -pydantic==1.9.0 -fastapi==0.95.0 -phdi +typing_extensions==4.6.3 +pydantic==1.10.9 +fastapi==0.96.0 +phdi @ git+https://github.com/CDCgov/phdi@updatepython uvicorn httpx diff --git a/containers/message-parser/Dockerfile b/containers/message-parser/Dockerfile index ea8b366b71..5441f987cf 100644 --- a/containers/message-parser/Dockerfile +++ b/containers/message-parser/Dockerfile @@ -1,7 +1,11 @@ -FROM python:3.10-slim +FROM python:3.11-slim WORKDIR /code +RUN apt-get update && \ + apt-get upgrade -y && \ + apt-get install -y git + COPY ./requirements.txt /code/requirements.txt RUN pip install -r requirements.txt diff --git a/containers/message-parser/requirements.txt b/containers/message-parser/requirements.txt index 5c8267e805..3b14c608a5 100644 --- a/containers/message-parser/requirements.txt +++ b/containers/message-parser/requirements.txt @@ -1,7 +1,7 @@ typing_extensions==4.5.0 -pydantic==1.9.0 -fastapi==0.95.0 -phdi +pydantic==1.10.9 +fastapi==0.96.0 +phdi @ git+https://github.com/CDCgov/phdi@updatepython uvicorn httpx pytest diff --git a/containers/record-linkage/Dockerfile b/containers/record-linkage/Dockerfile index 2b5fc85d80..88dec9f4e5 100644 --- a/containers/record-linkage/Dockerfile +++ b/containers/record-linkage/Dockerfile @@ -1,11 +1,11 @@ -FROM python:3.10-slim +FROM python:3.11-slim WORKDIR /code RUN apt-get update && \ apt-get upgrade -y && \ apt-get install -y git - + COPY ./requirements.txt /code/requirements.txt RUN pip install -r requirements.txt diff --git a/containers/record-linkage/requirements.txt b/containers/record-linkage/requirements.txt index 98dc63d1c3..da06943274 100644 --- a/containers/record-linkage/requirements.txt +++ b/containers/record-linkage/requirements.txt @@ -1,7 +1,7 @@ typing_extensions==4.5.0 uvicorn -pydantic==1.9.0 -fastapi==0.95.0 -phdi @ git+https://github.com/CDCgov/phdi@main +pydantic==1.10.9 +fastapi==0.96.0 +phdi @ git+https://github.com/CDCgov/phdi@updatepython httpx pathlib diff --git a/containers/tabulation/Dockerfile b/containers/tabulation/Dockerfile index 55460335e9..a11944588e 100644 --- a/containers/tabulation/Dockerfile +++ b/containers/tabulation/Dockerfile @@ -1,4 +1,4 @@ -FROM python:3.10-slim +FROM python:3.11-slim WORKDIR /code @@ -8,6 +8,8 @@ RUN apt-get -y update && \ apt-get upgrade -y && \ apt-get -y install gcc +RUN apt-get install -y git + COPY ./requirements.txt /code/requirements.txt RUN pip install -r requirements.txt diff --git a/containers/tabulation/requirements.txt b/containers/tabulation/requirements.txt index e33be775cc..4ee4bf79b3 100644 --- a/containers/tabulation/requirements.txt +++ b/containers/tabulation/requirements.txt @@ -1,7 +1,7 @@ typing_extensions==4.5.0 -pydantic==1.9.0 -fastapi==0.95.0 -phdi +pydantic==1.10.9 +fastapi==0.96.0 +phdi @ git+https://github.com/CDCgov/phdi@updatepython uvicorn httpx pytest diff --git a/containers/validation/Dockerfile b/containers/validation/Dockerfile index 50829d9e0c..643f0d06a7 100644 --- a/containers/validation/Dockerfile +++ b/containers/validation/Dockerfile @@ -1,7 +1,11 @@ -FROM python:3.10-slim +FROM python:3.11-slim WORKDIR /code +RUN apt-get update && \ + apt-get upgrade -y && \ + apt-get install -y git + COPY ./requirements.txt /code/requirements.txt RUN pip install -r requirements.txt diff --git a/containers/validation/requirements.txt b/containers/validation/requirements.txt index e33be775cc..4ee4bf79b3 100644 --- a/containers/validation/requirements.txt +++ b/containers/validation/requirements.txt @@ -1,7 +1,7 @@ typing_extensions==4.5.0 -pydantic==1.9.0 -fastapi==0.95.0 -phdi +pydantic==1.10.9 +fastapi==0.96.0 +phdi @ git+https://github.com/CDCgov/phdi@updatepython uvicorn httpx pytest diff --git a/poetry.lock b/poetry.lock index 808af4ba17..1b93ac8710 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,5 +1,3 @@ -# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. - 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