20-annexa-CLEAN.ipynb

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 "cells": [
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "# 20-CLEAN"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "%load_ext autoreload\n",
    "%autoreload 2"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "import os\n",
    "import sys\n",
    "import logging\n",
    "from fddc.config import Config\n",
    "from fddc.annex_a.cleaner import clean"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "logger = logging.getLogger()\n",
    "logger.setLevel(logging.INFO)\n",
    "logging.debug(\"This is just to get loggin to work - it seems to refuse to log unless you log something!\")"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Set paths\n",
    "\n",
    "config = Config(\"config/data-map.yml\")\n",
    "\n",
    "# Full path to the input file that should be cleaned\n",
    "config[\"input_file\"] = \"merged.xlsx\"\n",
    "\n",
    "# Full path to the output file that will hold the cleaned data\n",
    "config[\"output_file\"] = \"cleaned.xlsx\"\n",
    "\n",
    "# Full path to a file holding a report of how the matching was performed\n",
    "config[\"matching_report_file\"] = \"matching_report.xlsx\""
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Launch cleaning\n",
    "\n",
    "clean(**config)"
   ]
  }
 ],
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