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index.html
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<!DOCTYPE html>
<html lang="en-US">
<head>
<!-- ---------- BASIC ---------- -->
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width,initial-scale=1.0" />
<!-- ---------- META ---------- -->
<title>Wall of Software | CU DBMI</title>
<meta name="title" content="Wall of Software | CU DBMI" />
<meta
name="description"
content="The many software produced by the CU Department of Biomedical Informatics."
/>
<meta property="og:title" content="Wall of Software | CU DBMI" />
<meta property="og:type" content="website" />
<meta
property="og:description"
content="The many software produced by the CU Department of Biomedical Informatics."
/>
<meta property="og:image" content="/wall-of-software/src/share.jpg" />
<meta
property="og:url"
content="https://cu-dbmi.github.io/wall-of-software/"
/>
<meta property="twitter:card" content="summary_large_image" />
<meta property="twitter:title" content="Wall of Software | CU DBMI" />
<meta
property="twitter:description"
content="The many software produced by the CU Department of Biomedical Informatics."
/>
<meta property="twitter:image" content="/wall-of-software/src/share.jpg" />
<meta
property="twitter:url"
content="https://cu-dbmi.github.io/wall-of-software/"
/>
<!-- ---------- FAVICON ---------- -->
<link
rel="icon"
type="image/png"
href="https://medschool.cuanschutz.edu/CU_favicon_96x96.png"
sizes="96x96"
/>
<!-- ---------- FONTS ---------- -->
<link rel="preconnect" href="https://fonts.googleapis.com" />
<link rel="preconnect" href="https://fonts.gstatic.com" crossorigin />
<link
rel="stylesheet"
href="https://fonts.googleapis.com/css2?family=IBM+Plex+Mono:wght@300&family=IBM+Plex+Sans:ital,wght@0,300;0,400;0,600;1,400&display=swap"
media="none"
onload="this.onload = null; this.removeAttribute('media');"
/>
<!-- ---------- INCLUDES ---------- -->
<link rel="stylesheet" href="src/styles.css" />
<link rel="stylesheet" href="src/util.css" />
<link rel="stylesheet" href="src/header.css" />
<link rel="stylesheet" href="src/grid.css" />
<script
src="https://cdn.jsdelivr.net/npm/@alpinejs/intersect@3.x.x/dist/cdn.min.js"
defer
crossorigin
></script>
<script
src="https://cdn.jsdelivr.net/npm/alpinejs@3.x.x/dist/cdn.min.js"
defer
crossorigin
></script>
<script type="importmap" defer crossorigin>
{
"imports": {
"three": "https://cdn.jsdelivr.net/npm/three@0.160.0/+esm",
"three/addons/": "https://cdn.jsdelivr.net/npm/three@0.160.0/examples/jsm/"
}
}
</script>
<script type="module" src="src/viz.js" defer></script>
<script src="src/alpine.js"></script>
<script src="src/tooltips.js"></script>
</head>
<body>
<!-- ---------- HEADER ---------- -->
<header>
<canvas></canvas>
<h1 class="title">
<template x-data x-for="char in $store.store.title">
<span x-text="char" class="char"></span></template
><span class="cursor">_</span>
</h1>
<h2 class="subtitle">
<svg
viewBox="18 18 217 208"
class="icon"
height="1em"
aria-hidden="true"
>
<path
d="m39.397 169.55h43.396v34.827l26.321 26.084h86.707l26.392-26.084v-95.493h17.065v-34.895h-52.341v121.62h-69.261v-26.06h26.211l26.008-26.051v-34.615h-34.887v25.863h-17.332v-60.758h-52.192v34.895h17.308v25.863h-34.683v-87.027h86.899v26.269h34.887v-34.754l-26.008-26.075h-104.49l-26.102 26.063v104.28l26.102 26.051"
/>
</svg>
Department of Biomedical Informatics
</h2>
</header>
<main>
<!-- ---------- SUMMARY ---------- -->
<section>
<noscript>
Sorry, this website doesn't work without JavaScript enabled.
</noscript>
<div>
<p>
<b
x-data
x-intersect.once="window.countUp"
x-text="String($store.store.count).padStart(2, '0')"
style="font-size: 1.2rem; margin-right: 5px"
>—</b
>
<i>tools, packages, workflows, resources, and other software</i>
</p>
<p style="margin-top: 5px">
developed at or in collaboration with the
<a href="https://medschool.cuanschutz.edu/dbmi" target="_blank"
>Department of Biomedical Informatics</a
>
(DBMI) at the
<a href="https://medschool.cuanschutz.edu/" target="_blank"
>University of Colorado</a
>
</p>
</div>
</section>
<!-- ---------- SOFTWARE ---------- -->
<section>
<div
x-data="{ inView: false }"
x-intersect="inView = true"
class="grid"
:style="{ '--cols': $store.store.cols }"
>
<template x-for="(entry, index) in $store.store.software">
<div
:style="{
'--offset': Math.floor(index / $store.store.cols) % 2 ? -1 : 1,
'--play': inView ? 'running' : 'paused',
'--delay': entry.order * (500 / $store.store.software.length) + 'ms',
}"
class="cell"
>
<!-- OUTLINE -->
<svg
viewBox="-0.866 -1 1.732 2"
class="outline"
aria-hidden="true"
>
<path
pathLength="1"
d="
M 0.866 -0.500
L 0.000 -1.000
L -0.866 -0.500
L -0.866 0.500
L 0.000 1.000
L 0.866 0.500
z
"
/>
</svg>
<!-- LINK -->
<a
class="link"
tabindex="0"
:href="entry.link"
target="_blank"
:aria-label="`${entry.name} - ${entry.description}`"
>
<!-- IMAGE -->
<img
class="image"
:src="`${$store.store.folder}/${entry.name.toLowerCase().replace(/[^a-z0-9]+/g, '-')}.png`"
loading="lazy"
onerror="this.remove();"
aria-hidden="true"
/>
<!-- NAME -->
<div x-text="entry.name" class="name" aria-hidden="true"></div>
</a>
<!-- TOOLTIP -->
<div
x-show="entry.description.trim()"
class="tooltip"
aria-hidden="true"
>
<div x-text="entry.description" class="tooltip-content"></div>
</div>
</div>
</template>
</div>
</section>
<!-- ---------- GROUPS ---------- -->
<section>
<h2>GROUPS</h2>
<div
x-data="{ inView: false }"
x-intersect="inView = true"
class="grid"
:style="{ '--cols': $store.store.cols }"
>
<template x-for="(entry, index) in $store.store.groups">
<div
:style="{
'--offset': Math.floor(index / $store.store.cols) % 2 ? -1 : 1,
'--play': inView ? 'running' : 'paused',
'--delay': entry.order * (500 / $store.store.groups.length) + 'ms',
}"
class="cell"
>
<!-- OUTLINE -->
<svg
viewBox="-0.866 -1 1.732 2"
class="outline"
aria-hidden="true"
>
<path
pathLength="1"
d="
M 0.866 -0.500
L 0.000 -1.000
L -0.866 -0.500
L -0.866 0.500
L 0.000 1.000
L 0.866 0.500
z
"
/>
</svg>
<!-- LINK -->
<a
class="link"
tabindex="0"
:href="entry.link"
target="_blank"
:aria-label="`${entry.name} - ${entry.description}`"
>
<!-- IMAGE -->
<img
class="image"
:src="`${$store.store.folder}/${entry.name.toLowerCase().replace(/[^a-z0-9]+/g, '-')}.png`"
loading="lazy"
onerror="this.remove();"
aria-hidden="true"
/>
<!-- NAME -->
<div x-text="entry.name" class="name" aria-hidden="true"></div>
</a>
<!-- TOOLTIP -->
<div
x-show="entry.description.trim()"
class="tooltip"
aria-hidden="true"
>
<div x-text="entry.description" class="tooltip-content"></div>
</div>
</div>
</template>
</div>
</section>
<!-- ---------- ACTIONS ---------- -->
<section>
<div class="buttons">
<a href="https://github.com/CU-DBMI" target="_blank" class="button">
<svg
viewBox="0 0 496 512"
class="icon"
height="1em"
aria-hidden="true"
>
<path
d="M165.9 397.4c0 2-2.3 3.6-5.2 3.6-3.3 .3-5.6-1.3-5.6-3.6 0-2 2.3-3.6 5.2-3.6 3-.3 5.6 1.3 5.6 3.6zm-31.1-4.5c-.7 2 1.3 4.3 4.3 4.9 2.6 1 5.6 0 6.2-2s-1.3-4.3-4.3-5.2c-2.6-.7-5.5 .3-6.2 2.3zm44.2-1.7c-2.9 .7-4.9 2.6-4.6 4.9 .3 2 2.9 3.3 5.9 2.6 2.9-.7 4.9-2.6 4.6-4.6-.3-1.9-3-3.2-5.9-2.9zM244.8 8C106.1 8 0 113.3 0 252c0 110.9 69.8 205.8 169.5 239.2 12.8 2.3 17.3-5.6 17.3-12.1 0-6.2-.3-40.4-.3-61.4 0 0-70 15-84.7-29.8 0 0-11.4-29.1-27.8-36.6 0 0-22.9-15.7 1.6-15.4 0 0 24.9 2 38.6 25.8 21.9 38.6 58.6 27.5 72.9 20.9 2.3-16 8.8-27.1 16-33.7-55.9-6.2-112.3-14.3-112.3-110.5 0-27.5 7.6-41.3 23.6-58.9-2.6-6.5-11.1-33.3 2.6-67.9 20.9-6.5 69 27 69 27 20-5.6 41.5-8.5 62.8-8.5s42.8 2.9 62.8 8.5c0 0 48.1-33.6 69-27 13.7 34.7 5.2 61.4 2.6 67.9 16 17.7 25.8 31.5 25.8 58.9 0 96.5-58.9 104.2-114.8 110.5 9.2 7.9 17 22.9 17 46.4 0 33.7-.3 75.4-.3 83.6 0 6.5 4.6 14.4 17.3 12.1C428.2 457.8 496 362.9 496 252 496 113.3 383.5 8 244.8 8zM97.2 352.9c-1.3 1-1 3.3 .7 5.2 1.6 1.6 3.9 2.3 5.2 1 1.3-1 1-3.3-.7-5.2-1.6-1.6-3.9-2.3-5.2-1zm-10.8-8.1c-.7 1.3 .3 2.9 2.3 3.9 1.6 1 3.6 .7 4.3-.7 .7-1.3-.3-2.9-2.3-3.9-2-.6-3.6-.3-4.3 .7zm32.4 35.6c-1.6 1.3-1 4.3 1.3 6.2 2.3 2.3 5.2 2.6 6.5 1 1.3-1.3 .7-4.3-1.3-6.2-2.2-2.3-5.2-2.6-6.5-1zm-11.4-14.7c-1.6 1-1.6 3.6 0 5.9 1.6 2.3 4.3 3.3 5.6 2.3 1.6-1.3 1.6-3.9 0-6.2-1.4-2.3-4-3.3-5.6-2z"
/>
</svg>
GitHub
</a>
<a
href="https://github.com/CU-DBMI/wall-of-software"
target="_blank"
class="button"
>
<svg
viewBox="0 0 448 512"
class="icon"
height="1em"
aria-hidden="true"
>
<path
d="M384 32c35.3 0 64 28.7 64 64V416c0 35.3-28.7 64-64 64H64c-35.3 0-64-28.7-64-64V96C0 60.7 28.7 32 64 32H384zM160 144c-13.3 0-24 10.7-24 24s10.7 24 24 24h94.1L119 327c-9.4 9.4-9.4 24.6 0 33.9s24.6 9.4 33.9 0l135-135V328c0 13.3 10.7 24 24 24s24-10.7 24-24V168c0-13.3-10.7-24-24-24H160z"
/>
</svg>
Submit
</a>
</div>
</section>
</main>
<!-- ---------- FOOTER ---------- -->
<footer>
<a href="https://medschool.cuanschutz.edu/dbmi/research" target="_blank"
>Research</a
>
<a href="https://news.cuanschutz.edu/dbmi" target="_blank">News</a>
<a href="https://cu-dbmi.github.io/set-website/" target="_blank"
>Software Team</a
>
</footer>
</body>
</html>