Please visit the BIBSNet webpage for comprehensive documentation (including background information, installation and usage instructions, etc) and the BIBSNet dockerhub Repository to download the container.
We introduce BIBSNet (Baby and Infant Brain Segmentation Neural Network), an open-source, community-driven deep learning model. Provided as a BIDS App container, BIBSNet leverages data augmentation and a large, manually annotated infant dataset to produce robust and generalizable brain segmentations. The model outputs native-space brain segmentations, brain masks, and sidecar JSON files as BIDS derivatives.
