pytest-py38-mindeps.yml

name: pytest-py38-mindeps

on:
  push:
    branches: [ main ]
  pull_request:
    branches: [ main ]
  # Allows you to run this workflow manually from the Actions tab
  workflow_dispatch:

jobs:
  build:

    runs-on: ubuntu-latest

    steps:
    - uses: actions/checkout@v2
    - name: Set up Python
      uses: actions/setup-python@v4
      with:
        python-version: '3.8.14' #used at HMC
    - name: Set fixed versions in requirements.txt extracted from pyproject.toml
      run: |
        python -m pip install --upgrade pip
        python -m pip install "toml-to-requirements==0.1.0" # highest version available to py38
        toml-to-req --toml-file pyproject.toml --include-optional # --optional-lists dev # commented arg is available from toml-to-requirements 0.2.0, but that version is not available for py38.
        sed -i -E 's/>=/==/' requirements.txt
        # temporarily removing all non-dev optional requirements manually, can be done more cleanly with toml-to-req>=0.2.0
        sed -i '/^sphinx/d' requirements.txt
        sed -i '/^nbsphinx/d' requirements.txt
        sed -i '/^pydata-sphinx-theme/d' requirements.txt
        sed -i '/^jupyter/d' requirements.txt
        sed -i '/^notebook/d' requirements.txt
    - name: Print contents of requirements.txt
      run: |
        # print file contents
        cat requirements.txt
    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        python -m pip install -r requirements.txt
        # also install the package itself to enable subprocess to work properly (for cli)
        python -m pip install -e .
    - name: list env contents
      run: |
        conda info
        conda list
        pip list
    - name: Lint with flake8
      run: |
        # stop the build if there are Python syntax errors or undefined names
        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
    - name: Test with pytest
      run: |
        pytest -m "not acceptance" --cov=hatyan --cov-report xml --cov-report term