pecan.rb

# Licensed under the Apache License, Version 2.0 (the License);
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#     http://www.apache.org/licenses/LICENSE-2.0
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an AS IS BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

class Pecan < Formula
  desc 'Probabilistic consistency based aligner'
  homepage 'http://hgwdev.cse.ucsc.edu/~benedict/code/Pecan.html'
  url 'https://github.com/benedictpaten/pecan.git', :using => :git
  version '0.8.0'

  depends_on 'jdk@8'

  def install
    system 'javac', 'bp/pecan/Pecan.java'
    system 'javac', 'bp/trawler/Trawler.java'
    libexec.install 'bp'
    doc.install Dir['doc/*']
  end
end