From 74942c48bd4f0c12cdbde9741f40d568d756dbb7 Mon Sep 17 00:00:00 2001
From: Adrian Waddell <adrian@waddell.ch>
Date: Fri, 5 Jul 2024 15:05:32 -0400
Subject: [PATCH] add missing dependency declarations to methods and utils

---
 DESCRIPTION    | 4 +++-
 NAMESPACE      | 6 ++++++
 R/AllClasses.R | 2 ++
 3 files changed, 11 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 6953679c..49a1cb4c 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -38,7 +38,9 @@ Imports:
     gridExtra,
     Biostrings,
     ComplexHeatmap,
-    GenomicRanges
+    GenomicRanges,
+    methods,
+    utils
 Depends:
 Collate: 
     'AllClasses.R'
diff --git a/NAMESPACE b/NAMESPACE
index 5fec629b..ee7ddc91 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -161,4 +161,10 @@ export(validBSgenome)
 import(data.table)
 importFrom(GenomicRanges,GRanges)
 importFrom(Rcpp,sourceCpp)
+importFrom(methods,representation)
+importFrom(methods,setClass)
+importFrom(methods,setClassUnion)
+importFrom(methods,setMethod)
+importFrom(methods,setValidity)
+importFrom(utils,packageVersion)
 useDynLib(ArchR)
diff --git a/R/AllClasses.R b/R/AllClasses.R
index 314c4182..75b7a2e5 100644
--- a/R/AllClasses.R
+++ b/R/AllClasses.R
@@ -1,6 +1,8 @@
 #' @useDynLib ArchR
 #' @importFrom Rcpp sourceCpp
 #' @importFrom GenomicRanges GRanges
+#' @importFrom methods setClassUnion setClass representation setValidity setMethod
+#' @importFrom utils packageVersion
 #' @import data.table
 NULL