- The following steps will be done in documented in this report: @@ -3173,7 +3173,7 @@
- Google Doc with search terms and questions
Report Assessment Ch1 Evidence Causes
-
Working Title
IPBES_TCA_Ch1_evidence_causes
@@ -3185,8 +3185,8 @@Code repo
Build No: 324
+Build No: 327
The BuidNo is automatically increased by one each time the report is rendered. It is used to indicate different renderings when the version stays the same.
Methods
1. Ethical arguments for transformative change
-The search terms is ethical on OpenAlex.
+The search terms is ethical on OpenAlex.
@@ -3758,12 +3778,12 @@
Nature Corpus AND
+
Narrowed TCA Corpus AND
+
Nature Corpus AND Narrowed TCA Corpus AND
+
diff --git a/IPBES_Ch1_evidence_causes.qmd b/IPBES_Ch1_evidence_causes.qmd
index 837ef8a..dbe7304 100644
--- a/IPBES_Ch1_evidence_causes.qmd
+++ b/IPBES_Ch1_evidence_causes.qmd
@@ -176,7 +176,7 @@ count$tca_corpus <- openalexR::oa_fetch(
### 1. Ethical arguments for transformative change
-The search terms is [ethical](inputs/ch1_evidence_causes/ethical.txt){target=_blank}
+The search terms is [ethical](./inputs/ch1_evidence_causes/ethical.txt){target=_blank}
on **OpenAlex**.
```{r}
@@ -341,6 +341,26 @@ st_1_nat <- compact(paste0("(", nature_st, ") AND (", biodiv_loss_1_st, ") AND (
st_2_tca <- compact(paste0("(", narrowed_tca_st, ") AND (", biodiv_loss_1_st, ") AND (", biodiv_loss_2_st, ")"))
st_3_nat <- compact(paste0("(", nature_st, ") AND (", narrowed_tca_st, ") AND (", biodiv_loss_1_st, ") AND (", biodiv_loss_2_st, ")"))
+count$st_1_nat <- openalexR::oa_fetch(
+ title_and_abstract.search = st_1_nat,
+ count_only = TRUE,
+ output = "list",
+ verbose = TRUE
+)$count
+
+count$st_2_tca <- openalexR::oa_fetch(
+ title_and_abstract.search = st_2_tca,
+ count_only = TRUE,
+ output = "list",
+ verbose = TRUE
+)$count
+
+count$st_3_nat <- openalexR::oa_fetch(
+ title_and_abstract.search = st_3_nat,
+ count_only = TRUE,
+ output = "list",
+ verbose = TRUE
+)$count
count$biodiv_loss_nat_s_1 <- openalexR::oa_fetch(
title_and_abstract.search = compact(paste0("(", st_1_nat, ") AND (", biodiv_loss_3_1_st, ")")),
@@ -769,6 +789,8 @@ The Narrowed Nature Corpus consists of **`r count$narrowed_tca_nature`** works,
### Nature Corpus AND `Step 1` AND `Step 2`
+- **`r count$st_1_nat `** works in the Nature Corpus crossed with Step 1 and Step 2 terms, which is **`r round(100 * count$st_1_nat / count$nature_corpus, digits = 2)`%** of the Nature Corpus
+
There are the following numbers of wotks in the Nature Corpus:
- **`r count$biodiv_loss_nat_s_1 `** works in the Nature Corpus that discuss the `Topic 1`, which is **`r round(100 * count$biodiv_loss_nat_s_1 / count$nature_corpus, digits = 2)`%**
@@ -780,6 +802,8 @@ There are the following numbers of wotks in the Nature Corpus:
### Narrowed TCA Corpus AND `Step 1` AND `Step 2`
+- **`r count$st_3_nat `** works in the Narrowed TCA Corpus crossed the NAture Corpus and with Step 1 and Step 2 terms, which is **`r round(100 * count$st_3_nat / count$narrowed_tca_tca, digits = 2)`%** of the Narrowed TCA Corpus
+
There are the following numbers of wotks in the Narrowed TCA Corpus:
- **`r count$biodiv_loss_narrowed_s_1 `** works in the Narrowed TFC Corpus that discuss the `Topic 1`, which is **`r round(100 * count$biodiv_loss_narrowed_s_1 / count$narrowed_tca_tca, digits = 2)`%**
@@ -790,6 +814,8 @@ There are the following numbers of wotks in the Narrowed TCA Corpus:
### Nature Corpus AND Narrowed TCA Corpus AND `Step 1` AND `Step 2`
+- **`r count$st_2_tca `** works in the Narrowed TCA Corpus crossed with Step 1 and Step 2 terms, which is **`r round(100 * count$st_2_tca / count$narrowed_tca_nature, digits = 2)`%** of the Narrowed TCA Corpus
+
There are the following numbers of wotks in the Nature Corpus AND Narrowed TCA Corpus:
- **`r count$biodiv_loss_nat_narrowed_s_1 `** works in the Nature Corpus AND Narrowed TFC Corpus that discuss the `Topic 1`, which is **`r round(100 * count$biodiv_loss_nat_narrowed_s_1 / count$narrowed_tca_nature, digits = 2)`%**
diff --git a/buildNo_ch1_evidence_causes b/buildNo_ch1_evidence_causes
index d3824c2..27a69f6 100644
--- a/buildNo_ch1_evidence_causes
+++ b/buildNo_ch1_evidence_causes
@@ -1 +1 @@
-324
+327
diff --git a/data/ch1_evidence_causes/counts.rds b/data/ch1_evidence_causes/counts.rds
index a5840fb..e918763 100644
Binary files a/data/ch1_evidence_causes/counts.rds and b/data/ch1_evidence_causes/counts.rds differ
Results
1. Ethical arguments for transformative change
Subset of TCA Corpus
How many, what percentage, and what papers in the full TC corpus?
-The Ethics Corpus consists of 132013 works, which is 2.88% of the TCA Corpus
+The Ethics Corpus consists of 131735 works, which is 2.85% of the TCA Corpus
2. Assessing broader biodiversity concepts
Subset of OpenAlex Corpus
-The Concepts 1 Corpus (talking about biodiversity in relation to conservation, management, policy, or governance ) consists of 121192 works, which is 0.5% of the Nature Corpus. Of these, 21706 (% of Nature Corpus and % of the Concept 1 Corpus) works also talk about broader than non-human species and ecosystems.
+The Concepts 1 Corpus (talking about biodiversity in relation to conservation, management, policy, or governance ) consists of 123033 works, which is 0.5% of the Nature Corpus. Of these, 22056 (% of Nature Corpus and % of the Concept 1 Corpus) works also talk about broader than non-human species and ecosystems.
3. Assessing disciplinary bias in the nature corpus
@@ -3772,62 +3792,71 @@
4. Narrowed TFC corpus
Subset of TCA Corpus
-The Narrowed TFC Corpus consists of 1027011 works, which is 22.42% of the TCA Corpus.
+The Narrowed TFC Corpus consists of 1033466 works, which is 22.38% of the TCA Corpus.
Subset of Nature Corpus
-The Narrowed Nature Corpus consists of 1139465 works, which is 4.69% of the Nature Corpus.
+The Narrowed Nature Corpus consists of 1147429 works, which is 4.68% of the Nature Corpus.
5. Assessing criteria in the Narrowed TFC corpus
Criteria 1
-277358 works in the narrowed TCA Corpus, which is 27.01% of the Narrowed TCA Corpus.
+278355 works in the narrowed TCA Corpus, which is 26.93% of the Narrowed TCA Corpus.
Criteria 2
-395943 works in the narrowed TCA Corpus, which is 38.55% of the Narrowed TCA Corpus.
+398677 works in the narrowed TCA Corpus, which is 38.58% of the Narrowed TCA Corpus.
Criteria 3
-559791 works in the narrowed TCA Corpus, which is 54.51% of the Narrowed TCA Corpus.
+563984 works in the narrowed TCA Corpus, which is 54.57% of the Narrowed TCA Corpus.
Criteria 4
-838671 works in the narrowed TCA Corpus, which is 81.66% of the Narrowed TCA Corpus.
+845458 works in the narrowed TCA Corpus, which is 81.81% of the Narrowed TCA Corpus.
6. Assessing the literature that discusses the causes of biodiversity loss
Nature Corpus AND Step 1 AND Step 2
+-
+
- 1521 works in the Nature Corpus crossed with Step 1 and Step 2 terms, which is 0.01% of the Nature Corpus +
There are the following numbers of wotks in the Nature Corpus:
-
-
- 227 works in the Nature Corpus that discuss the
Topic 1, which is 0%
+ - 222 works in the Nature Corpus that discuss the
Topic 1, which is 0% - 30 works in the Nature Corpus that discuss the
Topic 2, which is 0%
- - 56 works in the Nature Corpus that discuss the
Topic 3, which is 0%
+ - 58 works in the Nature Corpus that discuss the
Topic 3, which is 0% - **** works in the Nature Corpus that discuss the
Topic 4, which is %
- - 222 works in the Nature Corpus that discuss the
Topic 5, which is 0%
+ - 214 works in the Nature Corpus that discuss the
Topic 5, which is 0%
Narrowed TCA Corpus AND Step 1 AND Step 2
+-
+
- 369 works in the Narrowed TCA Corpus crossed the NAture Corpus and with Step 1 and Step 2 terms, which is 0.04% of the Narrowed TCA Corpus +
There are the following numbers of wotks in the Narrowed TCA Corpus:
-
-
- 104 works in the Narrowed TFC Corpus that discuss the
Topic 1, which is 0.01%
+ - 102 works in the Narrowed TFC Corpus that discuss the
Topic 1, which is 0.01% - 20 works in the Narrowed TFC Corpus that discuss the
Topic 2, which is 0% - 35 works in the Narrowed TFC Corpus that discuss the
Topic 3, which is 0% - **** works in the Narrowed TFC Corpus that discuss the
Topic 4, which is %
- - 101 works in the Narrowed TFC Corpus that discuss the
Topic 5, which is 0.01%
+ - 93 works in the Narrowed TFC Corpus that discuss the
Topic 5, which is 0.01%
Nature Corpus AND Narrowed TCA Corpus AND Step 1 AND Step 2
+-
+
- 437 works in the Narrowed TCA Corpus crossed with Step 1 and Step 2 terms, which is 0.04% of the Narrowed TCA Corpus +
There are the following numbers of wotks in the Nature Corpus AND Narrowed TCA Corpus:
-
-
- 87 works in the Nature Corpus AND Narrowed TFC Corpus that discuss the
Topic 1, which is 0.01%
+ - 85 works in the Nature Corpus AND Narrowed TFC Corpus that discuss the
Topic 1, which is 0.01% - 20 works in the Nature Corpus AND Narrowed TFC Corpus that discuss the
Topic 2, which is 0% - 32 works in the Nature Corpus AND Narrowed TFC Corpus that discuss the
Topic 3, which is 0% - **** works in the Nature Corpus AND Narrowed TFC Corpus that discuss the
Topic 4, which is %
- - 93 works in the Nature Corpus AND Narrowed TFC Corpus that discuss the
Topic 5, which is 0.01%
+ - 86 works in the Nature Corpus AND Narrowed TFC Corpus that discuss the
Topic 5, which is 0.01%