diff --git a/docs/_static/t2star_plots.png b/docs/_static/t2star_plots.png new file mode 100644 index 000000000..57ee7a555 Binary files /dev/null and b/docs/_static/t2star_plots.png differ diff --git a/docs/outputs.rst b/docs/outputs.rst index 4f2d5d68b..8a8efae02 100644 --- a/docs/outputs.rst +++ b/docs/outputs.rst @@ -527,6 +527,22 @@ should not overly focus on carpet plots and should examine these results in cont :height: 400px +************************ +T2* and S0 Summary Plots +************************ + +Below the carpet plots are summary plots for the T2* and S0 maps. +Each map has two figures: a spatial map of the values and a histogram of the voxelwise values. +The T2* map should look similar to T2 maps and be brightest in the ventricles and darkest in areas of largest susceptibility. +The S0 map should roughly follow the signal-to-noise ratio and will be brightest near the surface near RF coils. + +It is important to note that the histogram is limited from 0 to the 98th percentile of the data to improve readability. + +.. image:: /_static/t2star_plots.png + :align: center + :height: 400px + + ************************** Citable workflow summaries ************************** diff --git a/tedana/reporting/data/html/report_body_template.html b/tedana/reporting/data/html/report_body_template.html index f01b17c86..008713715 100644 --- a/tedana/reporting/data/html/report_body_template.html +++ b/tedana/reporting/data/html/report_body_template.html @@ -1,4 +1,9 @@