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DESCRIPTION
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DESCRIPTION
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Package: ExprX
Type: Package
Title: Interspecies differential expression analysis of orthologous
genes
Version: 1.0.4
Authors@R: c(
person("Mingan", "Sun", email="mingansun@yahoo.com", role = c("aut","cre")),
person("Yejun", "Wang", role = c("ctb")),
person("Linlin", "Zou", role = c("ctb")),
person("Todd", "Macfarlan", role = c("ctb"))
)
Maintainer: Ming-an Sun <mingansun@gmail.com>
Description: ExprX is a R package to streamline interspecies differential expression
analysis. Taking TPM or FPKM/RPKM files for samples from different species as
input, it provides functions to handle all necessary steps, including data loading,
ortholog matching, normalization, differential analysis and visualization.
License: MIT
Imports: biomaRt (>= 2.42.0), edgeR (>= 3.28.0), RankProd (>= 3.12.0)
Suggests: limma (>= 3.42.2), testthat, knitr, rmarkdown
Depends: R (>= 3.5.1)
URL: https://github.com/mingansun/ExprX
Encoding: UTF-8
LazyData: true
Date/Publication: 2020-2-24
NeedsCompilation: no
Packaged: 2020-09-10 07:22:39 UTC; mingansun
Author: Ming-an Sun [aut, cre],
Yejun Wang [ctb]
RoxygenNote: 7.1.0
VignetteBuilder: knitr