From 7b8eeb390ef5f64532cd8a20da3437d098c5746a Mon Sep 17 00:00:00 2001
From: Fengchao <fcyucn@gmail.com>
Date: Wed, 17 Nov 2021 13:56:44 -0500
Subject: [PATCH] Bump to 17.1

---
 MSFragger-GUI/build.gradle                          |  2 +-
 .../src/com/dmtavt/fragpipe/Bundle.properties       |  4 ++--
 MSFragger-GUI/src/com/dmtavt/fragpipe/Version.java  | 13 +++++++++++++
 .../src/umich/msfragger/gui/Bundle.properties       |  4 ++--
 4 files changed, 18 insertions(+), 5 deletions(-)

diff --git a/MSFragger-GUI/build.gradle b/MSFragger-GUI/build.gradle
index ee88d6fba..eb2878ac7 100644
--- a/MSFragger-GUI/build.gradle
+++ b/MSFragger-GUI/build.gradle
@@ -21,7 +21,7 @@ plugins {
 }
 
 group = 'com.github.chhh'
-version = '17.1-build7'
+version = '17.1'
 
 description = """FragPipe - run complete proteomics analyses from the GUI"""
 
diff --git a/MSFragger-GUI/src/com/dmtavt/fragpipe/Bundle.properties b/MSFragger-GUI/src/com/dmtavt/fragpipe/Bundle.properties
index 1f8137c8b..a3a551638 100644
--- a/MSFragger-GUI/src/com/dmtavt/fragpipe/Bundle.properties
+++ b/MSFragger-GUI/src/com/dmtavt/fragpipe/Bundle.properties
@@ -16,10 +16,10 @@
 #
 
 # current dev version
-msfragger.gui.version=17.1-build7
+msfragger.gui.version=17.1
 
 # current last published release
-fragpipe.last.release.version=17.0
+fragpipe.last.release.version=17.1
 
 msfragger.gui.important-updates=4.1,4.4,5.0,5.1,5.3,7.2,8.1,8.4,8.5,8.6,8.8,9.4,12.2
 msfragger.gui.critical-updates=4.0,4.6,4.7,5.2,6.0,7.1,8.3,8.7,9.0,9.1,9.3,10.1,12.0,13.0
diff --git a/MSFragger-GUI/src/com/dmtavt/fragpipe/Version.java b/MSFragger-GUI/src/com/dmtavt/fragpipe/Version.java
index 20195d136..62eeb9d2a 100644
--- a/MSFragger-GUI/src/com/dmtavt/fragpipe/Version.java
+++ b/MSFragger-GUI/src/com/dmtavt/fragpipe/Version.java
@@ -63,6 +63,19 @@ public class Version {
       new VersionComparator());
 
   static {
+    CHANGELOG.put("17.1", Arrays.asList(
+        "Require MSFragger 3.4+",
+        "Require Philosopher 4.1.0+",
+        "Add Pierce iRT file",
+        "Add `contam_` prefix to contaminants in the downloaded database",
+        "Add more workflows",
+        "Upgrade PTM-Shepherd to 1.2.6",
+        "Upgrade IonQuant to 1.7.17",
+        "Upgrade TMT-Integrator to 3.2.1",
+        "Upgrade MSBooster",
+        "Various minor bug fixes and improvements"
+    ));
+
     CHANGELOG.put("17.0", Arrays.asList(
         "Require MSFragger 3.4+",
         "Require Philosopher 4.1.0+",
diff --git a/MSFragger-GUI/src/umich/msfragger/gui/Bundle.properties b/MSFragger-GUI/src/umich/msfragger/gui/Bundle.properties
index 1f8137c8b..a3a551638 100644
--- a/MSFragger-GUI/src/umich/msfragger/gui/Bundle.properties
+++ b/MSFragger-GUI/src/umich/msfragger/gui/Bundle.properties
@@ -16,10 +16,10 @@
 #
 
 # current dev version
-msfragger.gui.version=17.1-build7
+msfragger.gui.version=17.1
 
 # current last published release
-fragpipe.last.release.version=17.0
+fragpipe.last.release.version=17.1
 
 msfragger.gui.important-updates=4.1,4.4,5.0,5.1,5.3,7.2,8.1,8.4,8.5,8.6,8.8,9.4,12.2
 msfragger.gui.critical-updates=4.0,4.6,4.7,5.2,6.0,7.1,8.3,8.7,9.0,9.1,9.3,10.1,12.0,13.0