-
Notifications
You must be signed in to change notification settings - Fork 248
/
pyproject.toml
133 lines (120 loc) · 3.05 KB
/
pyproject.toml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
[project]
name = "neo"
version = "0.14.0.dev0"
authors = [{name = "Neo authors and contributors"}]
description = "Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats"
readme = "README.rst"
requires-python = ">=3.9,<3.13" # 3.13 will require NumPy > 2.0 (Windows issue in CI)
license = {text = "BSD 3-Clause License"}
classifiers = [
"Development Status :: 4 - Beta",
"Programming Language :: Python :: 3",
"Operating System :: OS Independent",
"Intended Audience :: Science/Research",
"Natural Language :: English",
"Topic :: Scientific/Engineering",
"License :: OSI Approved :: BSD License",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Programming Language :: Python :: 3 :: Only",
]
dependencies = [
"packaging",
"numpy>=1.22.4,<2.0.0",
"quantities>=0.16.1"
]
[project.urls]
homepage = "https://neuralensemble.org/neo"
documentation = "http://neo.readthedocs.io/"
repository = "https://github.com/NeuralEnsemble/python-neo"
download = "http://pypi.python.org/pypi/neo"
[build-system]
requires = ["setuptools>=62.0"]
build-backend = "setuptools.build_meta"
[project.optional-dependencies]
iocache = [
"joblib>=1.0.0"
]
test = [
"dhn_med_py<2.0", # ci failing with 2.0 test future version when stable
"pytest",
"pytest-cov",
# datalad # this dependency is covered by conda (environment_testing.yml)
"scipy>=1.0.0",
"pyedflib",
"h5py",
"igor2",
"klusta",
"tqdm",
"nixio",
"matplotlib",
"ipython",
"joblib>=1.0.0",
"coverage",
"coveralls",
"pillow",
"sonpy;python_version<'3.10'",
"pynwb",
"probeinterface",
"zugbruecke>=0.2",
"wenv"
]
docs = [
"docutils",
"sphinx",
"sphinx-inline-tabs",
"sphinx-gallery",
"pydata-sphinx-theme",
"sphinx-design",
"ipython",
"matplotlib",
"nixio",
"pynwb",
"igor2"
]
dev = [
"build",
"twine",
"black"
]
igorproio = ["igor2"]
kwikio = ["klusta"]
neomatlabio = ["scipy>=1.0.0"]
nixio = ["nixio>=1.5.0"]
stimfitio = ["stfio"]
tiffio = ["pillow"]
edf = ["pyedflib"]
ced = ["sonpy"]
nwb = ["pynwb"]
maxwell = ["h5py"]
biocam = ["h5py"]
med = ["dhn_med_py<2.0"] # ci failing with 2.0 test future version when stable
plexon2 = ["zugbruecke>=0.2; sys_platform!='win32'", "wenv; sys_platform!='win32'"]
all = [
"coverage",
"coveralls",
"dhn_med_py<2.0", # ci failing with 2.0 test future version when stable
"h5py",
"igor2",
"ipython",
"joblib>=1.0.0",
"klusta",
"matplotlib",
"nixio>=1.5.0",
"pillow",
"probeinterface",
"pyedflib",
"pynwb",
"pytest",
"pytest-cov",
"scipy>=1.0.0",
"sonpy",
"tqdm",
"wenv; sys_platform!='win32'",
"zugbruecke>=0.2; sys_platform!='win32'",
]
# we do not include 'stfio' in 'all' as it is not pip installable
[tool.black]
line-length = 120