:-) GROMACS - gmx solvate, 2022.4-conda_forge (-:

Executable:   /cluster/ddu/cmmartinez001/miniconda3/envs/openbiosim-dev/bin.AVX2_256/gmx
Data prefix:  /cluster/ddu/cmmartinez001/miniconda3/envs/openbiosim-dev
Working dir:  /cluster/ddu/cmmartinez001/Projects/RNMT/Openbiosim/sol_test
Command line:
  gmx solvate -cs spc216 -cp box.gro -o output.gro

Reading solute configuration
Reading solvent configuration

Initialising inter-atomic distances...
Generating solvent configuration
Will generate new solvent configuration of 5x5x5 boxes
Solvent box contains 57156 atoms in 19052 residues
Removed 6297 solvent atoms due to solvent-solvent overlap
Removed 4536 solvent atoms due to solute-solvent overlap
Sorting configuration
Found 1 molecule type:
    SOL (   3 atoms): 15441 residues
Generated solvent containing 46323 atoms in 15441 residues
Writing generated configuration to output.gro

Output configuration contains 50998 atoms in 15732 residues
Volume                 :         512 (nm^3)
Density                :     1017.74 (g/l)
Number of solvent molecules:  15441   


GROMACS reminds you: "We cannot wait for Nature's good graces - to take them from her is our goal" (Ivan Michurin)