Skip to content

Releases: PhysiCell-Tools/PhysiCell-Studio

v2.0.0 - sync with PhysiCell 1.10

13 May 11:47
0c886c3
Compare
Choose a tag to compare
  • try to capture the XML model description in PhysiCell 1.10.0
  • general cleanup

v1.7: provide unique IDs on new cell defs

22 Mar 15:47
Compare
Choose a tag to compare
  • fix bug to provide unique cell def IDs
  • beware: user can still delete the default cell def (ID=0)

v1.6: fix Config tab bugs

22 Mar 15:00
Compare
Choose a tag to compare
  • cells.csv toggle
  • full interval widget

v1.5 - redesign of Custom Data

24 Feb 22:34
Compare
Choose a tag to compare
  • all Custom Data now in Cell Types tab
  • bug fixes for maintaining/writing custom data

v1.4: reworked custom data; Dirichlet_options

03 Oct 19:47
Compare
Choose a tag to compare

Bug fixes:

  • saving Dirichlet_options in XML
  • Cell Custom Data --> Cell Types/Custom Data logic, but now users need to click 'Update Cell Types' button

v1.3: more bug fixes

27 Jul 17:48
Compare
Choose a tag to compare

Bug fixes, for some users:

  • the startup copy of copy_template.xml would complain/crash if the file existed.
  • the GUI size needed to be enlarged to properly display the User Params

Special thanks to Zoe Bell at Newcastle University, UK, for reporting and helping debug these!

v1.2: more bug fixes

26 Jul 11:09
Compare
Choose a tag to compare

Fixed more bugs:

  • cell cycle transition rates and durations "fixed" checkboxes were not being synced with XML
  • substrates (when more than 1) were not having Dirichlet BC checkbox match XML
  • save then open mymodel.xml would crash

Thanks again to Heber Rocha for reporting some of these bugs!

bug fixes: save xml for renamed substrate in Motility chemotaxis

16 Jul 09:19
Compare
Choose a tag to compare
  • fix: when a substrate is renamed that's used for Motility chemotaxis, save the new name in XML
  • fix: prevent crash when the File -> Open dialog is Canceled
  • clean up the File menu: for now, we only Save results as mymodel.xml

Thanks to John Metzcar for testing!

v1.0 - July workshop release

12 Jul 10:23
Compare
Choose a tag to compare
  • fixed bug: renamed substrate appeared multiple times in Cell Types comboboxes for Motility and Secretion
  • general cleanup of debug prints

Thanks Heber Rocha for testing and reporting!

v0.4.5 - bug fixes for cell types

12 Jun 19:04
Compare
Choose a tag to compare
  • Deep copy of cell type for New and Copy (for Secretion params).
  • after a cell type is deleted, update display for newly selected cell type
  • make the 2 "enable" toggles on Motility more clear (one for motility, one for chemotaxis)
  • "on/off" Dirichlet toggles for Microenv are now just labeled "on"

Thanks John Metzcar for testing!