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DESCRIPTION
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DESCRIPTION
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Encoding: UTF-8
Package: inctools
Type: Package
Title: Incidence Estimation Tools
Version: 1.0.9006
Date: 2020-06-16
Authors@R: c(
person("Eduard","Grebe",email="Eduard.Grebe@ucsf.edu",role=c("cre","aut")),
person("Alex","Welte", email="alexwelte@sun.ac.za", role="aut"),
person("Avery","McIntosh",email="avery.i.mcintosh@gmail.com",role="aut"),
person("Petra","Bäumler",email="petra.baeumler@med.uni-muenich.de",role="aut"),
person("Reshma","Kassanjee", role="ctb"),
person("Hilmarie","Brand", role="ctb"),
person("Cari","Van Schalkwyk", role="ctb"),
person("Yuruo","Li",email="yul123@pitt.edu", role="ctb"),
person("Simon","Daniel",email="skjdaniel@gmail.com", role="ctb"),
person("Stefano","Ongarello", email="stefano.ongarello@finddx.org", role="aut"),
person("Yusuke","Asai", email="yusuke.asai@yahoo.de", role="ctb"),
person("Jeffrey","Eaton", email="jeffrey.eaton@imperial.ac.uk", role="ctb")
)
Description: Tools for estimating incidence from biomarker data in cross-
sectional surveys, and for calibrating tests for recent infection.
Implements and extends the method of Kassanjee et al. (2012)
<doi:10.1097/EDE.0b013e3182576c07>.
URL: https://github.sacema.org/inctools/index.html
BugReports: https://github.com/SACEMA/inctools/issues
Depends:
R (>= 3.6.0)
License: GPL-3
LazyData: True
Imports:
stats,
utils,
magrittr,
rlang (>= 0.4.0),
dplyr (>= 0.8.0),
tidyr (>= 1.0.0),
tibble (>= 2.1.0),
cubature,
tmvtnorm,
ggplot2,
glm2 (>= 1.2.0),
plyr,
pracma,
foreach,
parallel,
doParallel,
binom
Suggests:
survey,
knitr,
rmarkdown,
testthat (>= 2.1.0)
VignetteBuilder: knitr
RoxygenNote: 7.1.0
Roxygen:
list(roclets = c("rd", "collate", "namespace", "vignette"))