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When canceling the snakemake process with Ctrl+C, I'd expect Snakemake to scancel all jobs (cluster-cancel: scancel) and terminate gracefully. However, I'm encountering the error below:
slurm-status.py: could not query side car: HTTPConnectionPool(host='localhost', port=42129): Max retries exceeded with url: /job/status/3253425 (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f2579923100>: Failed to establish a new connection: [Errno 111] Connection refused'))
Perhaps slurm-status.py exists (due to Ctrl+C), while slurm-status.py is still trying to query it?
The text was updated successfully, but these errors were encountered:
When canceling the snakemake process with Ctrl+C, I'd expect Snakemake to scancel all jobs (
cluster-cancel: scancel
) and terminate gracefully. However, I'm encountering the error below:Perhaps
slurm-status.py
exists (due to Ctrl+C), whileslurm-status.py
is still trying to query it?The text was updated successfully, but these errors were encountered: