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ImportAnnotation Completion #7

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amircs opened this issue Aug 9, 2016 · 1 comment
Open

ImportAnnotation Completion #7

amircs opened this issue Aug 9, 2016 · 1 comment
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amircs commented Aug 9, 2016

How can we make sure that we successfully imported the reference file?

The first thing we should check is the size of annotationSet. If the number of annotations is NOT equal to the input file's number of lines (Considering there is no header) then definitely we are missing annotations. This condition is necessary, but not sufficient. A complete solution would be to iterate over all the lines again, and send a search request per each line to the server, and make sure the annotation exists.
@amircs amircs added the question label Aug 9, 2016
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amircs commented Aug 12, 2016

Adding the size feature has been filed as an internal issue by Google Genomics. Hopefully, we see this feature in the near future!

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