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Schema 41.1 #275

Merged
merged 64 commits into from
Aug 24, 2020
Merged

Schema 41.1 #275

merged 64 commits into from
Aug 24, 2020

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acavelan
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Add an Intel easybuild module for scicore
* fix C++ errors and add Easybuild file

* add directives to compile the EasyBuild module with Intel

* moving OpenMalaria module file to the easyconfigs folder

* fix easyconfig bug

* comments checkpointer timer functions in Simulator.cpp to fix a thread lock issue with intel

* attempt at fixing travis issue

* second attempt at fixing travis issues

* Fixing boost version to 1.60 in Travis Builds

* switching to fp model source for the Intel compiler

* add release script for Linux

* improve release script and add Mac OS / Unix support

* remove boost version 1.60 in install-dep-osx

* rename linux-build.sh to build.sh because of Mac OS support

* comment Mac OS line
* modify build.sh to work in Windows - Cygwin environment

* augments build.sh to compile a standalone release of OpenMalaria in Cygwin

* new appveyor.yml file

* using apt-cyg for cygwin

* improvement of buid.sh and appveyor.yml

* add help message and release parameter

* add Testing.zip to artifacts in Windows builds

* add --output-on-failure parameter to ctest
* add release script for Linux

* improve release script and add Mac OS / Unix support

* rename linux-build.sh to build.sh because of Mac OS support

* comment Mac OS line

* modify build.sh to work in Windows - Cygwin environment

* augments build.sh to compile a standalone release of OpenMalaria in Cygwin

* attempt at new appveyor file

* using apt-cyg for cygwin

* using apt-cyg for cygwin

* using apt-cyg for cygwin

* using apt-cyg for cygwin

* improvement of buid.sh and appveyor.yml

* trying to fic appveyor.yml

* fix path in appveyor.yml

* remove pushd in build.sh for Cygwin

* remove unnecessarry .exe extension in appveyor.yml

* fix dlls copying

* fix dlls copying

* fix dlls copying

* add debug info to appveyor.yml

* rm semicolumn in build.sh

* fix bug in build.sh for Cygwin

* changing cloning behaviour in build.sh

* changing cloning behaviour in build.sh

* add help message and release parameter

* add Testing.zip to artifacts in Windows builds

* add --output-on-failure parameter to ctest

* new travis configuration using build.sh

* remove extra quote

* attemtp to fic travis

* fix job lifecycle in travis

* install boost1.60 for mac OS tests

* forcing older version of boost for mac OS tests

* changing concurrent tests jobs to 1 to avoid conflicts

* change Mac OS 10.15.4 to 10.15
* add release script for Linux

* improve release script and add Mac OS / Unix support

* rename linux-build.sh to build.sh because of Mac OS support

* comment Mac OS line

* modify build.sh to work in Windows - Cygwin environment

* augments build.sh to compile a standalone release of OpenMalaria in Cygwin

* attempt at new appveyor file

* using apt-cyg for cygwin

* improvement of buid.sh and appveyor.yml

* trying to fic appveyor.yml

* fix path in appveyor.yml

* remove pushd in build.sh for Cygwin

* remove unnecessarry .exe extension in appveyor.yml

* fix dlls copying

* add debug info to appveyor.yml

* rm semicolumn in build.sh

* fix bug in build.sh for Cygwin

* changing cloning behaviour in build.sh

* add help message and release parameter

* add Testing.zip to artifacts in Windows builds

* add --output-on-failure parameter to ctest

* new travis configuration using build.sh

* remove extra quote

* attemtp to fix travis

* fix job lifecycle in travis

* install boost1.60 for mac OS tests

* forcing older version of boost for mac OS tests

* changing concurrent tests jobs to 1 to avoid conflicts

* change Mac OS 10.15.4 to 10.15
@acavelan acavelan requested a review from nakul7 August 21, 2020 14:42
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@nakul7 nakul7 left a comment

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Approved as discussed.

@acavelan acavelan merged commit dfedf68 into master Aug 24, 2020
@acavelan acavelan deleted the schema-41.1 branch August 31, 2020 09:02
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2 participants