From 6405dcfb3680b4d8a87a70bdc3af38681eeb83ec Mon Sep 17 00:00:00 2001 From: feiranl Date: Mon, 24 Apr 2023 00:42:46 +0800 Subject: [PATCH] fix-bug: bug in GPR --- model/Human-GEM.yml | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/model/Human-GEM.yml b/model/Human-GEM.yml index 4533e9bd..338f86b3 100644 --- a/model/Human-GEM.yml +++ b/model/Human-GEM.yml @@ -4,7 +4,7 @@ short_name: "Human-GEM" full_name: "Generic genome-scale metabolic model of Homo sapiens" version: "" - date: "2023-04-17" + date: "2023-04-24" authors: "Jonathan Robinson, Hao Wang, Pierre-Etienne Cholley, Pinar Kocabas" email: "jonrob@chalmers.se" organization: "Chalmers University of Technology" @@ -67752,11 +67752,11 @@ - MAM02819x: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000171989" + - gene_reaction_rule: "ENSG00000111716 or ENSG00000134333" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "1.1.1.27" - - references: "PMID:12042361;PMID:17045662;PMID:7449128;PMID:9927705" + - references: "PMID:12042361;PMID:17045662;PMID:7449128;PMID:9927705;PMID:25247702" - subsystem: - "Glycolysis / Gluconeogenesis" - confidence_score: 0 @@ -225223,7 +225223,7 @@ - MAM03620c: 2 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ENSG00000111716 and ENSG00000134333) or ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989" + - gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989" - rxnNotes: "" - rxnFrom: "Recon3D" - eccodes: "1.1.1.27" @@ -275060,7 +275060,7 @@ - MAM03176c: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "(ENSG00000111716 and ENSG00000134333) or ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000171989" + - gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989" - rxnNotes: "https://www.springer.com/gp/book/9789400957800" - rxnFrom: "Recon3D" - eccodes: "1.1.1.27" @@ -275110,7 +275110,7 @@ - MAM03186c: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "(ENSG00000111716 and ENSG00000134333) or ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000171989" + - gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989" - rxnNotes: "https://www.springer.com/gp/book/9789400957800" - rxnFrom: "Recon3D" - eccodes: "1.1.1.27"