diff --git a/ComplementaryData/modelCuration/metabolite_manual_curation.tsv b/ComplementaryData/modelCuration/metabolite_manual_curation.tsv
index 561b238d..502995d8 100644
--- a/ComplementaryData/modelCuration/metabolite_manual_curation.tsv
+++ b/ComplementaryData/modelCuration/metabolite_manual_curation.tsv
@@ -205,7 +205,6 @@ CDP-diacylglycerol (1-16:0, 2-18:1) CDP-diacylglycerol (1-16:0, 2-18:1) CHEBI:34
CDP-diacylglycerol (1-16:1, 2-16:1) CDP-diacylglycerol (1-16:1, 2-16:1) CHEBI:104012 0 new chebiID
CDP-diacylglycerol (1-16:1, 2-18:1) CDP-diacylglycerol (1-16:1, 2-18:1) 0 Wrong charge in erm/mm.
CDP-diacylglycerol (1-18:0, 2-16:1) CDP-diacylglycerol (1-18:0, 2-16:1) 0 No chebi id found. ECMDB23374
-CDP-diacylglycerol (1-18:0, 2-16:1) CDP-diacylglycerol (1-18:0, 2-16:1) ECMDB23374 0 Wrong CHEBI in erm/mm.
CDP-diacylglycerol (1-18:0, 2-18:1) CDP-diacylglycerol (1-18:0, 2-18:1) 0 Wrong charge in erm.
CDP-diacylglycerol (1-18:1, 2-16:1) CDP-diacylglycerol (1-18:1, 2-16:1) 0 Wrong charge in erm/mm.
CDP-diacylglycerol (1-18:1, 2-18:1) CDP-diacylglycerol (1-18:1, 2-18:1) CHEBI:104362 0 new chebiID. CHEBI:104362 for 1.2-dioctadec-11-enoyl-sn-glycero-3-cytidine 5'-diphosphate CDP-DG(18:1/18:1)
diff --git a/ModelFiles/dependencies.txt b/ModelFiles/dependencies.txt
index be0aa56c..cd099d6e 100644
--- a/ModelFiles/dependencies.txt
+++ b/ModelFiles/dependencies.txt
@@ -1,7 +1,7 @@
-MATLAB 9.3.0.713579 (R2017b)
+MATLAB 9.4.0.813654 (R2018a)
libSBML 5.17.0
RAVEN_toolbox 2.0.0
-COBRA_toolbox commit 7f88d93
+COBRA_toolbox commit 4bfe8b3
SBML_level 3
SBML_version 1
fbc_version 2
diff --git a/ModelFiles/xml/yeastGEM.xml b/ModelFiles/xml/yeastGEM.xml
index acb5f53b..14a58020 100644
--- a/ModelFiles/xml/yeastGEM.xml
+++ b/ModelFiles/xml/yeastGEM.xml
@@ -21057,14 +21057,7 @@
-
-
-
- metChEBIID:ECMDB23374
- metChEBIID:ECMDB23374
-
-
-
+
@@ -21190,14 +21183,7 @@
-
-
-
- metChEBIID:ECMDB23374
- metChEBIID:ECMDB23374
-
-
-
+
diff --git a/ModelFiles/yml/yeastGEM.yml b/ModelFiles/yml/yeastGEM.yml
index 2ce5b6eb..4c3a190f 100644
--- a/ModelFiles/yml/yeastGEM.yml
+++ b/ModelFiles/yml/yeastGEM.yml
@@ -13686,8 +13686,6 @@
- compartment: erm
- formula: C46H83N3O15P2
- charge: 0
- - annotation: !!omap
- - chebi: ECMDB23374
- !!omap
- id: s_3087
- name: CDP-diacylglycerol (1-18:1, 2-16:1)
@@ -13794,8 +13792,6 @@
- compartment: mm
- formula: C46H83N3O15P2
- charge: 0
- - annotation: !!omap
- - chebi: ECMDB23374
- !!omap
- id: s_3101
- name: phosphatidate (1-18:1, 2-16:1)