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Easy to code. 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"NPY", # numpy + "NPY201", # numpy ] ignore = [ diff --git a/src/segy/schema/format.py b/src/segy/schema/format.py index 5e6c79d..67ddcd1 100644 --- a/src/segy/schema/format.py +++ b/src/segy/schema/format.py @@ -2,10 +2,15 @@ from __future__ import annotations +from typing import TYPE_CHECKING + import numpy as np from segy.compat import StrEnum +if TYPE_CHECKING: + from typing import Any + class ScalarType(StrEnum): """A class representing scalar data types.""" @@ -29,18 +34,13 @@ def __repr__(self) -> str: return f"{self.__class__.__name__}.{self._name_}" @property - def char(self) -> str: - """Returns the numpy character code for a given data type string.""" - # IBM Float + def dtype(self) -> np.dtype[Any]: + """Return numpy dtype of the format.""" + # Special case for IBM 32-bit float if self.value == "ibm32": - return np.sctype2char("uint32") # noqa: NPY201 - - # String - if self.name.startswith("STRING"): - return str(self.value) + return np.dtype("uint32") - # Everything Else - return np.sctype2char(str(self.value)) # noqa: NPY201 + return np.dtype(self.value) class TextHeaderEncoding(StrEnum): diff --git a/src/segy/schema/header.py b/src/segy/schema/header.py index b6f9ed1..7c6122b 100644 --- a/src/segy/schema/header.py +++ b/src/segy/schema/header.py @@ -55,8 +55,8 @@ def offset(self) -> int: @property def dtype(self) -> np.dtype[Any]: - """Converts the byte order and data type of the object into a NumPy dtype.""" - return np.dtype(self.format.char) + """Converts the data type of the object into a NumPy dtype.""" + return self.format.dtype class HeaderSpec(BaseDataType): diff --git a/src/segy/schema/trace.py b/src/segy/schema/trace.py index 281fe10..faa7150 100644 --- a/src/segy/schema/trace.py +++ b/src/segy/schema/trace.py @@ -32,8 +32,8 @@ class TraceDataSpec(BaseDataType): @property def dtype(self) -> np.dtype[Any]: - """Get numpy dtype.""" - dtype = (self.format.char, (self.samples,)) + """Get numpy dtype with # of samples.""" + dtype = (self.format.dtype, (self.samples,)) return np.dtype(dtype) diff --git a/src/segy/transforms.py b/src/segy/transforms.py index 9b0af8c..f9aa18b 100644 --- a/src/segy/transforms.py +++ b/src/segy/transforms.py @@ -166,7 +166,9 @@ def transform(self, data: NDArray[Any]) -> NDArray[Any]: source_order = get_endianness(data) if source_order != self.target_order: - data = data.byteswap(inplace=True).newbyteorder(self.target_order.symbol) + data = data.byteswap(inplace=True) + swapped_dtype = data.dtype.newbyteorder(self.target_order.symbol) + data = data.view(swapped_dtype) return data diff --git a/tests/test_schema_trace.py b/tests/test_schema_trace.py index 4c18b75..64ee099 100644 --- a/tests/test_schema_trace.py +++ b/tests/test_schema_trace.py @@ -2,7 +2,6 @@ from __future__ import annotations -import numpy as np import pytest from segy.schema import Endianness @@ -47,7 +46,7 @@ def test_trace_spec( expected_itemsize = header_spec.dtype.itemsize + data_spec.dtype.itemsize expected_header_itemsize = header_spec.dtype.itemsize - expected_sample_subtype = (np.dtype(sample_format.char), (samples_per_trace,)) + expected_sample_subtype = (sample_format.dtype, (samples_per_trace,)) assert trace_spec.dtype.itemsize == expected_itemsize assert trace_spec.header.dtype.names == ("h1", "h2") assert trace_spec.header.dtype.itemsize == expected_header_itemsize diff --git a/tests/test_segy_factory.py b/tests/test_segy_factory.py index 745a3d3..6ccaff4 100644 --- a/tests/test_segy_factory.py +++ b/tests/test_segy_factory.py @@ -212,7 +212,7 @@ def test_trace_sample_template( if mock_segy_factory.sample_format == ScalarType.IBM32: expected_dtype = np.dtype("float32") else: - expected_dtype = np.dtype(mock_segy_factory.sample_format.char) + expected_dtype = mock_segy_factory.sample_format.dtype expected_shape = (num_traces, n_samples) assert samples.dtype == expected_dtype @@ -257,7 +257,9 @@ def test_trace_serialize( for field_name, values in rand_fields.items(): expected_traces["header"][field_name] = values if mock_segy_factory.spec.endianness == Endianness.BIG: - expected_traces = expected_traces.byteswap(inplace=True).newbyteorder(">") + expected_traces = expected_traces.byteswap(inplace=True) + expected_dtype = expected_traces.dtype.newbyteorder(">") + expected_traces = expected_traces.view(expected_dtype) assert trace_bytes == expected_traces.tobytes() diff --git a/tests/test_transforms.py b/tests/test_transforms.py index ab518f3..56a3882 100644 --- a/tests/test_transforms.py +++ b/tests/test_transforms.py @@ -37,7 +37,9 @@ def mock_header_little() -> NDArray[Any]: @pytest.fixture() def mock_header_big(mock_header_little: NDArray[Any]) -> NDArray[Any]: """Generate a mock structured array to test transforms with big endian.""" - return mock_header_little.byteswap().newbyteorder() + data = mock_header_little.byteswap() + swapped_dtype = data.dtype.newbyteorder() + return data.view(swapped_dtype) @pytest.fixture() @@ -62,7 +64,9 @@ def mock_data_little() -> NDArray[Any]: @pytest.fixture() def mock_data_big(mock_data_little: NDArray[Any]) -> NDArray[Any]: """Generate a mock big endian structured array to test transforms.""" - return mock_data_little.byteswap().newbyteorder() + data = mock_data_little.byteswap() + swapped_dtype = data.dtype.newbyteorder() + return data.view(swapped_dtype) class TestByteSwap: