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utils.py
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utils.py
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# Copyright (c) 2022 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import json
import math
import random
import re
from typing import List, Optional
import numpy as np
import paddle
from tqdm import tqdm
from paddlenlp.utils.log import logger
def set_seed(seed):
paddle.seed(seed)
random.seed(seed)
np.random.seed(seed)
def create_data_loader(dataset, mode="train", batch_size=1, trans_fn=None):
"""
Create dataloader.
Args:
dataset(obj:`paddle.io.Dataset`): Dataset instance.
mode(obj:`str`, optional, defaults to obj:`train`): If mode is 'train', it will shuffle the dataset randomly.
batch_size(obj:`int`, optional, defaults to 1): The sample number of a mini-batch.
trans_fn(obj:`callable`, optional, defaults to `None`): function to convert a data sample to input ids, etc.
Returns:
dataloader(obj:`paddle.io.DataLoader`): The dataloader which generates batches.
"""
if trans_fn:
dataset = dataset.map(trans_fn)
shuffle = True if mode == "train" else False
if mode == "train":
sampler = paddle.io.DistributedBatchSampler(dataset=dataset, batch_size=batch_size, shuffle=shuffle)
else:
sampler = paddle.io.BatchSampler(dataset=dataset, batch_size=batch_size, shuffle=shuffle)
dataloader = paddle.io.DataLoader(dataset, batch_sampler=sampler, return_list=True)
return dataloader
def map_offset(ori_offset, offset_mapping):
"""
map ori offset to token offset
"""
for index, span in enumerate(offset_mapping):
if span[0] <= ori_offset < span[1]:
return index
return -1
def reader(data_path, max_seq_len=512):
"""
read json
"""
with open(data_path, "r", encoding="utf-8") as f:
for line in f:
json_line = json.loads(line)
content = json_line["content"].strip()
prompt = json_line["prompt"]
# Model Input is aslike: [CLS] Prompt [SEP] Content [SEP]
# It include three summary tokens.
if max_seq_len <= len(prompt) + 3:
raise ValueError("The value of max_seq_len is too small, please set a larger value")
max_content_len = max_seq_len - len(prompt) - 3
if len(content) <= max_content_len:
yield json_line
else:
result_list = json_line["result_list"]
json_lines = []
accumulate = 0
while True:
cur_result_list = []
for result in result_list:
if result["end"] - result["start"] > max_content_len:
logger.warning(
"result['end'] - result ['start'] exceeds max_content_len, which will result in no valid instance being returned"
)
if (
result["start"] + 1 <= max_content_len < result["end"]
and result["end"] - result["start"] <= max_content_len
):
max_content_len = result["start"]
break
cur_content = content[:max_content_len]
res_content = content[max_content_len:]
while True:
if len(result_list) == 0:
break
elif result_list[0]["end"] <= max_content_len:
if result_list[0]["end"] > 0:
cur_result = result_list.pop(0)
cur_result_list.append(cur_result)
else:
cur_result_list = [result for result in result_list]
break
else:
break
json_line = {"content": cur_content, "result_list": cur_result_list, "prompt": prompt}
json_lines.append(json_line)
for result in result_list:
if result["end"] <= 0:
break
result["start"] -= max_content_len
result["end"] -= max_content_len
accumulate += max_content_len
max_content_len = max_seq_len - len(prompt) - 3
if len(res_content) == 0:
break
elif len(res_content) < max_content_len:
json_line = {"content": res_content, "result_list": result_list, "prompt": prompt}
json_lines.append(json_line)
break
else:
content = res_content
for json_line in json_lines:
yield json_line
def unify_prompt_name(prompt):
# The classification labels are shuffled during finetuning, so they need
# to be unified during evaluation.
if re.search(r"\[.*?\]$", prompt):
prompt_prefix = prompt[: prompt.find("[", 1)]
cls_options = re.search(r"\[.*?\]$", prompt).group()[1:-1].split(",")
cls_options = sorted(list(set(cls_options)))
cls_options = ",".join(cls_options)
prompt = prompt_prefix + "[" + cls_options + "]"
return prompt
return prompt
def get_relation_type_dict(relation_data, schema_lang="ch"):
def compare(a, b, schema_lang="ch"):
if schema_lang == "ch":
a = a[::-1]
b = b[::-1]
res = ""
for i in range(min(len(a), len(b))):
if a[i] == b[i]:
res += a[i]
else:
break
if res == "":
return res
if schema_lang == "ch" and res[::-1][0] == "的":
return res[::-1][1:]
elif schema_lang == "en" and res[-3:] == " of":
return res[:-3]
return ""
relation_type_dict = {}
added_list = []
for i in range(len(relation_data)):
added = False
if relation_data[i][0] not in added_list:
for j in range(i + 1, len(relation_data)):
match = compare(relation_data[i][0], relation_data[j][0], schema_lang=schema_lang)
if match != "":
match = unify_prompt_name(match)
if relation_data[i][0] not in added_list:
added_list.append(relation_data[i][0])
relation_type_dict.setdefault(match, []).append(relation_data[i][1])
added_list.append(relation_data[j][0])
relation_type_dict.setdefault(match, []).append(relation_data[j][1])
added = True
if not added:
added_list.append(relation_data[i][0])
if schema_lang == "ch":
suffix = relation_data[i][0].rsplit("的", 1)[1]
suffix = unify_prompt_name(suffix)
relation_type = suffix
else:
prefix = relation_data[i][0].split(" of ", 1)[0]
prefix = unify_prompt_name(prefix)
relation_type = prefix
relation_type_dict.setdefault(relation_type, []).append(relation_data[i][1])
return relation_type_dict
def add_entity_negative_example(examples, texts, prompts, label_set, negative_ratio):
negative_examples = []
positive_examples = []
with tqdm(total=len(prompts)) as pbar:
for i, prompt in enumerate(prompts):
redundants = list(set(label_set) ^ set(prompt))
redundants.sort()
num_positive = len(examples[i])
if num_positive != 0:
actual_ratio = math.ceil(len(redundants) / num_positive)
else:
# Set num_positive to 1 for text without positive example
num_positive, actual_ratio = 1, 0
if actual_ratio <= negative_ratio or negative_ratio == -1:
idxs = [k for k in range(len(redundants))]
else:
idxs = random.sample(range(0, len(redundants)), negative_ratio * num_positive)
for idx in idxs:
negative_result = {"content": texts[i], "result_list": [], "prompt": redundants[idx]}
negative_examples.append(negative_result)
positive_examples.extend(examples[i])
pbar.update(1)
return positive_examples, negative_examples
def add_relation_negative_example(redundants, text, num_positive, ratio):
added_example = []
rest_example = []
if num_positive != 0:
actual_ratio = math.ceil(len(redundants) / num_positive)
else:
# Set num_positive to 1 for text without positive example
num_positive, actual_ratio = 1, 0
all_idxs = [k for k in range(len(redundants))]
if actual_ratio <= ratio or ratio == -1:
idxs = all_idxs
rest_idxs = []
else:
idxs = random.sample(range(0, len(redundants)), ratio * num_positive)
rest_idxs = list(set(all_idxs) ^ set(idxs))
for idx in idxs:
negative_result = {"content": text, "result_list": [], "prompt": redundants[idx]}
added_example.append(negative_result)
for rest_idx in rest_idxs:
negative_result = {"content": text, "result_list": [], "prompt": redundants[rest_idx]}
rest_example.append(negative_result)
return added_example, rest_example
def add_full_negative_example(examples, texts, relation_prompts, predicate_set, subject_goldens, schema_lang="ch"):
with tqdm(total=len(relation_prompts)) as pbar:
for i, relation_prompt in enumerate(relation_prompts):
negative_sample = []
for subject in subject_goldens[i]:
for predicate in predicate_set:
# The relation prompt is constructed as follows:
# subject + "的" + predicate -> Chinese
# predicate + " of " + subject -> English
if schema_lang == "ch":
prompt = subject + "的" + predicate
else:
prompt = predicate + " of " + subject
if prompt not in relation_prompt:
negative_result = {"content": texts[i], "result_list": [], "prompt": prompt}
negative_sample.append(negative_result)
examples[i].extend(negative_sample)
pbar.update(1)
return examples
def generate_cls_example(text, labels, prompt_prefix, options):
random.shuffle(options)
cls_options = ",".join(options)
prompt = prompt_prefix + "[" + cls_options + "]"
result_list = []
example = {"content": text, "result_list": result_list, "prompt": prompt}
for label in labels:
start = prompt.rfind(label) - len(prompt) - 1
end = start + len(label)
result = {"text": label, "start": start, "end": end}
example["result_list"].append(result)
return example
def convert_cls_examples(raw_examples, prompt_prefix="情感倾向", options=["正向", "负向"]):
"""
Convert labeled data export from doccano for classification task.
"""
examples = []
logger.info("Converting doccano data...")
with tqdm(total=len(raw_examples)):
for line in raw_examples:
items = json.loads(line)
# Compatible with doccano >= 1.6.2
if "data" in items.keys():
text, labels = items["data"], items["label"]
else:
text, labels = items["text"], items["label"]
example = generate_cls_example(text, labels, prompt_prefix, options)
examples.append(example)
return examples
def convert_ext_examples(
raw_examples,
negative_ratio,
prompt_prefix="情感倾向",
options=["正向", "负向"],
separator="##",
is_train=True,
schema_lang="ch",
):
"""
Convert labeled data export from doccano for extraction and aspect-level classification task.
"""
def _sep_cls_label(label, separator):
label_list = label.split(separator)
if len(label_list) == 1:
return label_list[0], None
return label_list[0], label_list[1:]
texts = []
entity_examples = []
relation_examples = []
entity_cls_examples = []
entity_prompts = []
relation_prompts = []
entity_label_set = []
entity_name_set = []
predicate_set = []
subject_goldens = []
inverse_relation_list = []
predicate_list = []
logger.info("Converting doccano data...")
with tqdm(total=len(raw_examples)) as pbar:
for line in raw_examples:
items = json.loads(line)
entity_id = 0
if "data" in items.keys():
relation_mode = False
if isinstance(items["label"], dict) and "entities" in items["label"].keys():
relation_mode = True
text = items["data"]
entities = []
relations = []
if not relation_mode:
# Export file in JSONL format which doccano < 1.7.0
# e.g. {"data": "", "label": [ [0, 2, "ORG"], ... ]}
for item in items["label"]:
entity = {"id": entity_id, "start_offset": item[0], "end_offset": item[1], "label": item[2]}
entities.append(entity)
entity_id += 1
else:
# Export file in JSONL format for relation labeling task which doccano < 1.7.0
# e.g. {"data": "", "label": {"relations": [ {"id": 0, "start_offset": 0, "end_offset": 6, "label": "ORG"}, ... ], "entities": [ {"id": 0, "from_id": 0, "to_id": 1, "type": "foundedAt"}, ... ]}}
entities.extend([entity for entity in items["label"]["entities"]])
if "relations" in items["label"].keys():
relations.extend([relation for relation in items["label"]["relations"]])
else:
# Export file in JSONL format which doccano >= 1.7.0
# e.g. {"text": "", "label": [ [0, 2, "ORG"], ... ]}
if "label" in items.keys():
text = items["text"]
entities = []
for item in items["label"]:
entity = {"id": entity_id, "start_offset": item[0], "end_offset": item[1], "label": item[2]}
entities.append(entity)
entity_id += 1
relations = []
else:
# Export file in JSONL (relation) format
# e.g. {"text": "", "relations": [ {"id": 0, "start_offset": 0, "end_offset": 6, "label": "ORG"}, ... ], "entities": [ {"id": 0, "from_id": 0, "to_id": 1, "type": "foundedAt"}, ... ]}
text, relations, entities = items["text"], items["relations"], items["entities"]
texts.append(text)
entity_example = []
entity_prompt = []
entity_example_map = {}
entity_map = {} # id to entity name
for entity in entities:
entity_name = text[entity["start_offset"] : entity["end_offset"]]
entity_map[entity["id"]] = {
"name": entity_name,
"start": entity["start_offset"],
"end": entity["end_offset"],
}
entity_label, entity_cls_label = _sep_cls_label(entity["label"], separator)
# Define the prompt prefix for entity-level classification
# xxx + "的" + 情感倾向 -> Chinese
# Sentiment classification + " of " + xxx -> English
if schema_lang == "ch":
entity_cls_prompt_prefix = entity_name + "的" + prompt_prefix
else:
entity_cls_prompt_prefix = prompt_prefix + " of " + entity_name
if entity_cls_label is not None:
entity_cls_example = generate_cls_example(
text, entity_cls_label, entity_cls_prompt_prefix, options
)
entity_cls_examples.append(entity_cls_example)
result = {"text": entity_name, "start": entity["start_offset"], "end": entity["end_offset"]}
if entity_label not in entity_example_map.keys():
entity_example_map[entity_label] = {
"content": text,
"result_list": [result],
"prompt": entity_label,
}
else:
entity_example_map[entity_label]["result_list"].append(result)
if entity_label not in entity_label_set:
entity_label_set.append(entity_label)
if entity_name not in entity_name_set:
entity_name_set.append(entity_name)
entity_prompt.append(entity_label)
for v in entity_example_map.values():
entity_example.append(v)
entity_examples.append(entity_example)
entity_prompts.append(entity_prompt)
subject_golden = [] # Golden entity inputs
relation_example = []
relation_prompt = []
relation_example_map = {}
inverse_relation = []
predicates = []
for relation in relations:
predicate = relation["type"]
subject_id = relation["from_id"]
object_id = relation["to_id"]
# The relation prompt is constructed as follows:
# subject + "的" + predicate -> Chinese
# predicate + " of " + subject -> English
if schema_lang == "ch":
prompt = entity_map[subject_id]["name"] + "的" + predicate
inverse_negative = entity_map[object_id]["name"] + "的" + predicate
else:
prompt = predicate + " of " + entity_map[subject_id]["name"]
inverse_negative = predicate + " of " + entity_map[object_id]["name"]
if entity_map[subject_id]["name"] not in subject_golden:
subject_golden.append(entity_map[subject_id]["name"])
result = {
"text": entity_map[object_id]["name"],
"start": entity_map[object_id]["start"],
"end": entity_map[object_id]["end"],
}
inverse_relation.append(inverse_negative)
predicates.append(predicate)
if prompt not in relation_example_map.keys():
relation_example_map[prompt] = {"content": text, "result_list": [result], "prompt": prompt}
else:
relation_example_map[prompt]["result_list"].append(result)
if predicate not in predicate_set:
predicate_set.append(predicate)
relation_prompt.append(prompt)
for v in relation_example_map.values():
relation_example.append(v)
relation_examples.append(relation_example)
relation_prompts.append(relation_prompt)
subject_goldens.append(subject_golden)
inverse_relation_list.append(inverse_relation)
predicate_list.append(predicates)
pbar.update(1)
logger.info("Adding negative samples for first stage prompt...")
positive_examples, negative_examples = add_entity_negative_example(
entity_examples, texts, entity_prompts, entity_label_set, negative_ratio
)
if len(positive_examples) == 0:
all_entity_examples = []
else:
all_entity_examples = positive_examples + negative_examples
all_relation_examples = []
if len(predicate_set) != 0:
logger.info("Adding negative samples for second stage prompt...")
if is_train:
positive_examples = []
negative_examples = []
per_n_ratio = negative_ratio // 3
with tqdm(total=len(texts)) as pbar:
for i, text in enumerate(texts):
negative_example = []
collects = []
num_positive = len(relation_examples[i])
# 1. inverse_relation_list
redundants1 = inverse_relation_list[i]
# 2. entity_name_set ^ subject_goldens[i]
redundants2 = []
if len(predicate_list[i]) != 0:
nonentity_list = list(set(entity_name_set) ^ set(subject_goldens[i]))
nonentity_list.sort()
if schema_lang == "ch":
redundants2 = [
nonentity + "的" + predicate_list[i][random.randrange(len(predicate_list[i]))]
for nonentity in nonentity_list
]
else:
redundants2 = [
predicate_list[i][random.randrange(len(predicate_list[i]))] + " of " + nonentity
for nonentity in nonentity_list
]
# 3. entity_label_set ^ entity_prompts[i]
redundants3 = []
if len(subject_goldens[i]) != 0:
non_ent_label_list = list(set(entity_label_set) ^ set(entity_prompts[i]))
non_ent_label_list.sort()
if schema_lang == "ch":
redundants3 = [
subject_goldens[i][random.randrange(len(subject_goldens[i]))] + "的" + non_ent_label
for non_ent_label in non_ent_label_list
]
else:
redundants3 = [
non_ent_label + " of " + subject_goldens[i][random.randrange(len(subject_goldens[i]))]
for non_ent_label in non_ent_label_list
]
redundants_list = [redundants1, redundants2, redundants3]
for redundants in redundants_list:
added, rest = add_relation_negative_example(
redundants,
texts[i],
num_positive,
per_n_ratio,
)
negative_example.extend(added)
collects.extend(rest)
num_sup = num_positive * negative_ratio - len(negative_example)
if num_sup > 0 and collects:
if num_sup > len(collects):
idxs = [k for k in range(len(collects))]
else:
idxs = random.sample(range(0, len(collects)), num_sup)
for idx in idxs:
negative_example.append(collects[idx])
positive_examples.extend(relation_examples[i])
negative_examples.extend(negative_example)
pbar.update(1)
all_relation_examples = positive_examples + negative_examples
else:
relation_examples = add_full_negative_example(
relation_examples, texts, relation_prompts, predicate_set, subject_goldens, schema_lang=schema_lang
)
all_relation_examples = [r for relation_example in relation_examples for r in relation_example]
return all_entity_examples, all_relation_examples, entity_cls_examples
def get_dynamic_max_length(examples, default_max_length: int, dynamic_max_length: List[int]) -> int:
"""get max_length by examples which you can change it by examples in batch"""
cur_length = len(examples[0]["input_ids"])
max_length = default_max_length
for max_length_option in sorted(dynamic_max_length):
if cur_length <= max_length_option:
max_length = max_length_option
break
return max_length
def convert_example(
example, tokenizer, max_seq_len, multilingual=False, dynamic_max_length: Optional[List[int]] = None
):
"""
example: {
title
prompt
content
result_list
}
"""
if dynamic_max_length is not None:
temp_encoded_inputs = tokenizer(
text=[example["prompt"]],
text_pair=[example["content"]],
truncation=True,
max_seq_len=max_seq_len,
return_attention_mask=True,
return_position_ids=True,
return_dict=False,
return_offsets_mapping=True,
)
max_length = get_dynamic_max_length(
examples=temp_encoded_inputs, default_max_length=max_seq_len, dynamic_max_length=dynamic_max_length
)
# always pad to max_length
encoded_inputs = tokenizer(
text=[example["prompt"]],
text_pair=[example["content"]],
truncation=True,
max_seq_len=max_length,
pad_to_max_seq_len=True,
return_attention_mask=True,
return_position_ids=True,
return_dict=False,
return_offsets_mapping=True,
)
start_ids = [0.0 for x in range(max_length)]
end_ids = [0.0 for x in range(max_length)]
else:
encoded_inputs = tokenizer(
text=[example["prompt"]],
text_pair=[example["content"]],
truncation=True,
max_seq_len=max_seq_len,
pad_to_max_seq_len=True,
return_attention_mask=True,
return_position_ids=True,
return_dict=False,
return_offsets_mapping=True,
)
start_ids = [0.0 for x in range(max_seq_len)]
end_ids = [0.0 for x in range(max_seq_len)]
encoded_inputs = encoded_inputs[0]
offset_mapping = [list(x) for x in encoded_inputs["offset_mapping"]]
bias = 0
for index in range(1, len(offset_mapping)):
mapping = offset_mapping[index]
if mapping[0] == 0 and mapping[1] == 0 and bias == 0:
bias = offset_mapping[index - 1][1] + 1 # Includes [SEP] token
if mapping[0] == 0 and mapping[1] == 0:
continue
offset_mapping[index][0] += bias
offset_mapping[index][1] += bias
for item in example["result_list"]:
start = map_offset(item["start"] + bias, offset_mapping)
end = map_offset(item["end"] - 1 + bias, offset_mapping)
start_ids[start] = 1.0
end_ids[end] = 1.0
if multilingual:
tokenized_output = {
"input_ids": encoded_inputs["input_ids"],
"position_ids": encoded_inputs["position_ids"],
"start_positions": start_ids,
"end_positions": end_ids,
}
else:
tokenized_output = {
"input_ids": encoded_inputs["input_ids"],
"token_type_ids": encoded_inputs["token_type_ids"],
"position_ids": encoded_inputs["position_ids"],
"attention_mask": encoded_inputs["attention_mask"],
"start_positions": start_ids,
"end_positions": end_ids,
}
return tokenized_output