#Fitting Cormack-Jolly-Seber Models to Capture-Recapture Data using R2admb Filed under: Mark software, CJS model, Mark-recapture
This example provides a template to fit any fixed effects CJS model to capture-recapture data. This template and code to create the .DAT file are used in the R package marked (https://github.com/jlaake/marked) when use.admb is TRUE. The pdf shows an example with the dipper data that is also analyzed with MARK (http://www.phidot.org/software/mark/) through the RMark package (cran.r-project.org/web/packages/RMark/index.html) to show that the same results are obtained.
#Model description
https://github.com/jlaake/ADMB-Examples/blob/master/CJSFixedEffects.pdf
#ADMB Files
https://github.com/jlaake/ADMB-Examples/tree/master/Fixed%20Effect%20CJS