A python library for Random Boolean Networks.
Designed to be simple and fast, works particularly well with PyPy.
Install using pip including development extras
pip install -e .[dev]Enable pre-commit hooks with:
pre-commit installFreeze dependencies with:
pip-compileRun tests with:
pytestTest coverage with:
coverage run --source=pyrbn -m pytest
coverage report -mperformance comparison of backends
- networkx
- python-igraph
- graph-tool
- numpy
- done, slower than pure python or pypy