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README.Rmd
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README.Rmd
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---
output: github_document
---
<!-- README.md is generated from README.Rmd. Please edit that file -->
```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
)
```
# PopED <img src="man/figures/logo.png" align="right" alt="" width="240" />
<!-- badges: start -->
[![CRAN_Status_Badge](https://www.r-pkg.org/badges/version/PopED)](https://CRAN.R-project.org/package=PopED)
[![R-CMD-check](https://github.com/andrewhooker/PopED/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/andrewhooker/PopED/actions/workflows/R-CMD-check.yaml)
[![Codecov test coverage](https://codecov.io/gh/andrewhooker/PopED/graph/badge.svg)](https://app.codecov.io/gh/andrewhooker/PopED)
<!-- badges: end -->
PopED computes optimal experimental designs for both population
and individual studies based on nonlinear mixed-effect models.
Often this is based on a computation of the Fisher Information Matrix (FIM).
## Installation
You need to have R installed. Download the latest version of R from www.r-project.org.
You can install the released version of PopED from [CRAN](https://CRAN.R-project.org) with:
``` r
install.packages("PopED")
```
And the development version from [GitHub](https://github.com/) with:
``` r
# install.packages("devtools")
devtools::install_github("andrewhooker/PopED")
```
## Getting started
To get started you need to define
1. A model.
2. An initial design (and design space if you want to optimize).
3. The tasks to perform.
Learn more in this [introduction to PopED](https://andrewhooker.github.io/PopED/articles/intro-poped.html)
## Contact
You are welcome to:
* Ask questions at: https://github.com/andrewhooker/PopED/discussions
* submit suggestions and bug-reports at: https://github.com/andrewhooker/PopED/issues
* send a pull request on: https://github.com/andrewhooker/PopED
* compose a friendly e-mail to: andrew.hooker@farmaci.uu.se