evaluations/auto-code-rover-run-3/logs/sphinx-doc__sphinx-8721.gpt-4-0125-preview.eval.log

[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Task Metadata:
	- Instance ID: sphinx-doc__sphinx-8721
	- Testbed: sphinx-doc__sphinx__3.5
	- 
	- Evaluation Model: gpt-4-0125-preview 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: git -c advice.detachedHead=false checkout 82ef497a8c88f0f6e50d84520e7276bfbf65025d 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": false, "universal_newlines": true, "stdout": -1, "stderr": -2} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
Previous HEAD position was 4f8cb861e Bump version
HEAD is now at 82ef497a8 Merge pull request #8702 from tk0miya/4304_linkcheck_same_url
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/pytest/pytest -rA/' tox.ini 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/pytest/pytest -rA/' tox.ini 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/pytest/pytest -rA/' tox.ini
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/Jinja2>=2.3/Jinja2<3.0/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/Jinja2>=2.3/Jinja2<3.0/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/Jinja2>=2.3/Jinja2<3.0/' setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/sphinxcontrib-applehelp/sphinxcontrib-applehelp<=1.0.7/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-applehelp/sphinxcontrib-applehelp<=1.0.7/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-applehelp/sphinxcontrib-applehelp<=1.0.7/' setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/sphinxcontrib-devhelp/sphinxcontrib-devhelp<=1.0.5/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-devhelp/sphinxcontrib-devhelp<=1.0.5/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-devhelp/sphinxcontrib-devhelp<=1.0.5/' setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/sphinxcontrib-qthelp/sphinxcontrib-qthelp<=1.0.6/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-qthelp/sphinxcontrib-qthelp<=1.0.6/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-qthelp/sphinxcontrib-qthelp<=1.0.6/' setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/alabaster>=0.7,<0.8/alabaster>=0.7,<0.7.12/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/alabaster>=0.7,<0.8/alabaster>=0.7,<0.7.12/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/alabaster>=0.7,<0.8/alabaster>=0.7,<0.7.12/' setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i "s/'packaging',/'packaging', 'markupsafe<=2.0.1',/" setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i "s/'packaging',/'packaging', 'markupsafe<=2.0.1',/" setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i "s/'packaging',/'packaging', 'markupsafe<=2.0.1',/" setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/sphinxcontrib-htmlhelp/sphinxcontrib-htmlhelp<=2.0.4/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-htmlhelp/sphinxcontrib-htmlhelp<=2.0.4/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-htmlhelp/sphinxcontrib-htmlhelp<=2.0.4/' setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Running pre-test command: sed -i 's/sphinxcontrib-serializinghtml/sphinxcontrib-serializinghtml<=1.1.9/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-serializinghtml/sphinxcontrib-serializinghtml<=1.1.9/' setup.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": true, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
Pre-installation Command: conda run -n sphinx-doc__sphinx__3.5 sed -i 's/sphinxcontrib-serializinghtml/sphinxcontrib-serializinghtml<=1.1.9/' setup.py
Std. Output: 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: git apply -v /home/swe-bench/temp_sphinx-doc__sphinx-8721_pred_try.patch 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": false, "shell": false, "universal_newlines": true, "stdout": -1, "stderr": -2} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
Checking patch sphinx/ext/viewcode.py...
Applied patch sphinx/ext/viewcode.py cleanly.
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Apply patch successful (pred_try) 
>>>>> Applied Patch (pred_try)
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: git apply -v -R /home/swe-bench/temp_sphinx-doc__sphinx-8721_pred_try.patch 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": false, "shell": false, "universal_newlines": true, "stdout": -1, "stderr": -2} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
Checking patch sphinx/ext/viewcode.py...
Applied patch sphinx/ext/viewcode.py cleanly.
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Revert patch successful (pred_try) 
>>>>> Applied Patch (pred_try)
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: git apply -v /home/swe-bench/temp_sphinx-doc__sphinx-8721_pred.patch 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": false, "shell": false, "universal_newlines": true, "stdout": -1, "stderr": -2} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
Checking patch sphinx/ext/viewcode.py...
Applied patch sphinx/ext/viewcode.py cleanly.
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Apply patch successful (pred) 
>>>>> Applied Patch (pred)
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: git restore tests/test_ext_viewcode.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": true, "shell": false, "universal_newlines": true, "stdout": -1, "stderr": -2} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: git apply -v /home/swe-bench/temp_sphinx-doc__sphinx-8721_test.patch 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": false, "shell": false, "universal_newlines": true, "stdout": -1, "stderr": -2} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
Checking patch tests/test_ext_viewcode.py...
Applied patch tests/test_ext_viewcode.py cleanly.
 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 0 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Apply patch successful (test) 
>>>>> Applied Patch (test)
Test Script: conda run -n sphinx-doc__sphinx__3.5 tox -epy39 -v -- tests/test_ext_viewcode.py;
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Command: conda run -n sphinx-doc__sphinx__3.5 tox -epy39 -v -- tests/test_ext_viewcode.py 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Subprocess args: {"cwd": "/home/swe-bench/sphinx-doc__sphinx", "check": false, "shell": false, "universal_newlines": true, "stdout": -1, "stderr": -2, "timeout": 1800} 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Std. Output:
.pkg: find interpreter for spec PythonSpec(major=3, minor=9)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(path=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3, minor=5)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python3, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.11.8.final.0-64, exe=/home/swe-bench/miniconda3/bin/python3, platform=linux, version='3.11.8 (main, Feb 26 2024, 21:39:34) [GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3, minor=6)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python3, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.11.8.final.0-64, exe=/home/swe-bench/miniconda3/bin/python3, platform=linux, version='3.11.8 (main, Feb 26 2024, 21:39:34) [GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3, minor=7)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python3, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.11.8.final.0-64, exe=/home/swe-bench/miniconda3/bin/python3, platform=linux, version='3.11.8 (main, Feb 26 2024, 21:39:34) [GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3, minor=8)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python3, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: proposed PathPythonInfo(spec=CPython3.11.8.final.0-64, exe=/home/swe-bench/miniconda3/bin/python3, platform=linux, version='3.11.8 (main, Feb 26 2024, 21:39:34) [GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(path=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(path=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(path=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(path=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(major=3)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(path=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
.pkg: find interpreter for spec PythonSpec(path=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python)
.pkg: proposed PythonInfo(spec=CPython3.9.19.final.0-64, exe=/home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/bin/python, platform=linux, version='3.9.19 (main, May  6 2024, 19:43:03) \n[GCC 11.2.0]', encoding_fs_io=utf-8-utf-8)
py39: create virtual environment via CPython3Posix(dest=/home/swe-bench/sphinx-doc__sphinx/.tox/py39, clear=False, no_vcs_ignore=False, global=False)
py39: add seed packages via FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/swe-bench/.local/share/virtualenv)
py39: add activators for Bash, CShell, Fish, Nushell, PowerShell, Python
.pkg: create virtual environment via CPython3Posix(dest=/home/swe-bench/sphinx-doc__sphinx/.tox/.pkg, clear=False, no_vcs_ignore=False, global=False)
.pkg: add seed packages via FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/swe-bench/.local/share/virtualenv)
.pkg: add activators for Bash, CShell, Fish, Nushell, PowerShell, Python
.pkg: install_requires> python -I -m pip install 'setuptools>=40.8.0' wheel
.pkg: exit 0 (1.34 seconds) /home/swe-bench/sphinx-doc__sphinx> python -I -m pip install 'setuptools>=40.8.0' wheel pid=146
.pkg: _optional_hooks> python /home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/lib/python3.9/site-packages/pyproject_api/_backend.py True setuptools.build_meta __legacy__
.pkg: exit None (0.51 seconds) /home/swe-bench/sphinx-doc__sphinx> python /home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/lib/python3.9/site-packages/pyproject_api/_backend.py True setuptools.build_meta __legacy__ pid=151
.pkg: get_requires_for_build_editable> python /home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/lib/python3.9/site-packages/pyproject_api/_backend.py True setuptools.build_meta __legacy__
.pkg: exit None (0.60 seconds) /home/swe-bench/sphinx-doc__sphinx> python /home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/lib/python3.9/site-packages/pyproject_api/_backend.py True setuptools.build_meta __legacy__ pid=154
.pkg: install_requires_for_build_editable> python -I -m pip install wheel
.pkg: exit 0 (1.17 seconds) /home/swe-bench/sphinx-doc__sphinx> python -I -m pip install wheel pid=158
.pkg: build_editable> python /home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/lib/python3.9/site-packages/pyproject_api/_backend.py True setuptools.build_meta __legacy__
.pkg: exit None (0.48 seconds) /home/swe-bench/sphinx-doc__sphinx> python /home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/lib/python3.9/site-packages/pyproject_api/_backend.py True setuptools.build_meta __legacy__ pid=163
py39: install_package_deps> python -I -m pip install 'Jinja2<3.0' 'Pygments>=2.0' 'alabaster<0.7.12,>=0.7' 'babel>=1.3' 'colorama>=0.3.5; sys_platform == "win32"' cython 'docutils>=0.12' html5lib imagesize 'markupsafe<=2.0.1' packaging pytest pytest-cov 'requests>=2.5.0' setuptools 'snowballstemmer>=1.1' 'sphinxcontrib-applehelp<=1.0.7' 'sphinxcontrib-devhelp<=1.0.5' 'sphinxcontrib-htmlhelp<=2.0.4' sphinxcontrib-jsmath 'sphinxcontrib-qthelp<=1.0.6' 'sphinxcontrib-serializinghtml<=1.1.9' 'typed-ast; python_version < "3.8"'
py39: exit 0 (16.49 seconds) /home/swe-bench/sphinx-doc__sphinx> python -I -m pip install 'Jinja2<3.0' 'Pygments>=2.0' 'alabaster<0.7.12,>=0.7' 'babel>=1.3' 'colorama>=0.3.5; sys_platform == "win32"' cython 'docutils>=0.12' html5lib imagesize 'markupsafe<=2.0.1' packaging pytest pytest-cov 'requests>=2.5.0' setuptools 'snowballstemmer>=1.1' 'sphinxcontrib-applehelp<=1.0.7' 'sphinxcontrib-devhelp<=1.0.5' 'sphinxcontrib-htmlhelp<=2.0.4' sphinxcontrib-jsmath 'sphinxcontrib-qthelp<=1.0.6' 'sphinxcontrib-serializinghtml<=1.1.9' 'typed-ast; python_version < "3.8"' pid=167
py39: install_package> python -I -m pip install --force-reinstall --no-deps /home/swe-bench/sphinx-doc__sphinx/.tox/.tmp/package/1/Sphinx-3.5.0.dev20240512-0.editable-py3-none-any.whl
py39: exit 0 (0.98 seconds) /home/swe-bench/sphinx-doc__sphinx> python -I -m pip install --force-reinstall --no-deps /home/swe-bench/sphinx-doc__sphinx/.tox/.tmp/package/1/Sphinx-3.5.0.dev20240512-0.editable-py3-none-any.whl pid=179
py39: commands[0]> python -X dev -m pytest -rA --durations 25 tests/test_ext_viewcode.py
[1m============================= test session starts ==============================[0m
platform linux -- Python 3.9.19, pytest-8.2.0, pluggy-1.5.0
cachedir: .tox/py39/.pytest_cache
libraries: Sphinx-3.5.0+/82ef497a8, docutils-0.19
base tempdir: /tmp/pytest-of-swe-bench/pytest-0
rootdir: /home/swe-bench/sphinx-doc__sphinx
configfile: setup.cfg
plugins: cov-5.0.0
collected 5 items

tests/test_ext_viewcode.py [31mF[0m[31mF[0m[32m.[0m[32m.[0m[32m.[0m[31m                                         [100%][0m

=================================== FAILURES ===================================
[31m[1m________________________________ test_viewcode _________________________________[0m

app = <SphinxTestApp buildername='html'>
status = <_io.StringIO object at 0x745ab7361af0>
warning = <_io.StringIO object at 0x745ab7361b90>

    [0m[37m@pytest[39;49;00m.mark.sphinx(testroot=[33m'[39;49;00m[33mext-viewcode[39;49;00m[33m'[39;49;00m)[90m[39;49;00m
    [94mdef[39;49;00m [92mtest_viewcode[39;49;00m(app, status, warning):[90m[39;49;00m
        app.builder.build_all()[90m[39;49;00m
    [90m[39;49;00m
        warnings = re.sub([33mr[39;49;00m[33m'[39;49;00m[33m\\[39;49;00m[33m+[39;49;00m[33m'[39;49;00m, [33m'[39;49;00m[33m/[39;49;00m[33m'[39;49;00m, warning.getvalue())[90m[39;49;00m
        [94massert[39;49;00m re.findall([90m[39;49;00m
            [33mr[39;49;00m[33m"[39;49;00m[33mindex.rst:[39;49;00m[33m\[39;49;00m[33md+: WARNING: Object named [39;49;00m[33m'[39;49;00m[33mfunc1[39;49;00m[33m'[39;49;00m[33m not found in include [39;49;00m[33m"[39;49;00m +[90m[39;49;00m
            [33mr[39;49;00m[33m"[39;49;00m[33mfile .*/spam/__init__.py[39;49;00m[33m'[39;49;00m[33m"[39;49;00m,[90m[39;49;00m
            warnings[90m[39;49;00m
        )[90m[39;49;00m
    [90m[39;49;00m
        result = (app.outdir / [33m'[39;49;00m[33mindex.html[39;49;00m[33m'[39;49;00m).read_text()[90m[39;49;00m
        [94massert[39;49;00m result.count([33m'[39;49;00m[33mhref=[39;49;00m[33m"[39;49;00m[33m_modules/spam/mod1.html#func1[39;49;00m[33m"[39;49;00m[33m'[39;49;00m) == [94m2[39;49;00m[90m[39;49;00m
        [94massert[39;49;00m result.count([33m'[39;49;00m[33mhref=[39;49;00m[33m"[39;49;00m[33m_modules/spam/mod2.html#func2[39;49;00m[33m"[39;49;00m[33m'[39;49;00m) == [94m2[39;49;00m[90m[39;49;00m
        [94massert[39;49;00m result.count([33m'[39;49;00m[33mhref=[39;49;00m[33m"[39;49;00m[33m_modules/spam/mod1.html#Class1[39;49;00m[33m"[39;49;00m[33m'[39;49;00m) == [94m2[39;49;00m[90m[39;49;00m
        [94massert[39;49;00m result.count([33m'[39;49;00m[33mhref=[39;49;00m[33m"[39;49;00m[33m_modules/spam/mod2.html#Class2[39;49;00m[33m"[39;49;00m[33m'[39;49;00m) == [94m2[39;49;00m[90m[39;49;00m
        [94massert[39;49;00m result.count([33m'[39;49;00m[33m@decorator[39;49;00m[33m'[39;49;00m) == [94m1[39;49;00m[90m[39;49;00m
    [90m[39;49;00m
        [90m# test that the class attribute is correctly documented[39;49;00m[90m[39;49;00m
        [94massert[39;49;00m result.count([33m'[39;49;00m[33mthis is Class3[39;49;00m[33m'[39;49;00m) == [94m2[39;49;00m[90m[39;49;00m
        [94massert[39;49;00m [33m'[39;49;00m[33mthis is the class attribute class_attr[39;49;00m[33m'[39;49;00m [95min[39;49;00m result[90m[39;49;00m
        [90m# the next assert fails, until the autodoc bug gets fixed[39;49;00m[90m[39;49;00m
        [94massert[39;49;00m result.count([33m'[39;49;00m[33mthis is the class attribute class_attr[39;49;00m[33m'[39;49;00m) == [94m2[39;49;00m[90m[39;49;00m
    [90m[39;49;00m
        result = (app.outdir / [33m'[39;49;00m[33m_modules/spam/mod1.html[39;49;00m[33m'[39;49;00m).read_text()[90m[39;49;00m
        result = re.sub([33m'[39;49;00m[33m<span class=[39;49;00m[33m"[39;49;00m[33m.*?[39;49;00m[33m"[39;49;00m[33m>[39;49;00m[33m'[39;49;00m, [33m'[39;49;00m[33m<span>[39;49;00m[33m'[39;49;00m, result)  [90m# filter pygments classes[39;49;00m[90m[39;49;00m
>       [94massert[39;49;00m ([33m'[39;49;00m[33m<div class=[39;49;00m[33m"[39;49;00m[33mviewcode-block[39;49;00m[33m"[39;49;00m[33m id=[39;49;00m[33m"[39;49;00m[33mClass1[39;49;00m[33m"[39;49;00m[33m><a class=[39;49;00m[33m"[39;49;00m[33mviewcode-back[39;49;00m[33m"[39;49;00m[33m [39;49;00m[33m'[39;49;00m[90m[39;49;00m
                [33m'[39;49;00m[33mhref=[39;49;00m[33m"[39;49;00m[33m../../index.html#spam.Class1[39;49;00m[33m"[39;49;00m[33m>[docs]</a>[39;49;00m[33m'[39;49;00m[90m[39;49;00m
                [33m'[39;49;00m[33m<span>@decorator</span>[39;49;00m[33m\n[39;49;00m[33m'[39;49;00m[90m[39;49;00m
                [33m'[39;49;00m[33m<span>class</span> <span>Class1</span>[39;49;00m[33m'[39;49;00m[90m[39;49;00m
                [33m'[39;49;00m[33m<span>(</span><span>object</span><span>):</span>[39;49;00m[33m\n[39;49;00m[33m'[39;49;00m[90m[39;49;00m
                [33m'[39;49;00m[33m    <span>&quot;&quot;&quot;</span>[39;49;00m[33m\n[39;49;00m[33m'[39;49;00m[90m[39;49;00m
                [33m'[39;49;00m[33m<span>    this is Class1</span>[39;49;00m[33m\n[39;49;00m[33m'[39;49;00m[90m[39;49;00m
                [33m'[39;49;00m[33m<span>    &quot;&quot;&quot;</span></div>[39;49;00m[33m\n[39;49;00m[33m'[39;49;00m) [95min[39;49;00m result[90m[39;49;00m
[1m[31mE       assert '<div class="viewcode-block" id="Class1"><a class="viewcode-back" href="../../index.html#spam.Class1">[docs]</a><span>...an>\n    <span>&quot;&quot;&quot;</span>\n<span>    this is Class1</span>\n<span>    &quot;&quot;&quot;</span></div>\n' in '\n<!DOCTYPE html>\n\n<html>\n  <head>\n    <meta charset="utf-8" />\n    <meta name="viewport" content="width=device-..."https://github.com/bitprophet/alabaster">Alabaster 0.7.11</a>\n      \n    </div>\n\n    \n\n    \n  </body>\n</html>'[0m

[1m[31mtests/test_ext_viewcode.py[0m:42: AssertionError
--------------------------- Captured stdout teardown ---------------------------
# testroot: root
# builder: html
# srcdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode
# outdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/html
# status: 
[01mRunning Sphinx v3.5.0+/82ef497a8[39;49;00m
[01mbuilding [html]: [39;49;00mall source files
[01mupdating environment: [39;49;00m[new config] 2 added, 0 changed, 0 removed
[01mreading sources... [39;49;00m[ 50%] [35mindex[39;49;00m                                                
[01mreading sources... [39;49;00m[100%] [35mobjects[39;49;00m                                              
[01mlooking for now-outdated files... [39;49;00mnone found
[01mpickling environment... [39;49;00mdone
[01mchecking consistency... [39;49;00mdone
[01mpreparing documents... [39;49;00mdone
[01mwriting output... [39;49;00m[ 50%] [32mindex[39;49;00m                                                 
[01mwriting output... [39;49;00m[100%] [32mobjects[39;49;00m                                               
[01mgenerating indices... [39;49;00mgenindex py-modindex done
[01mhighlighting module code... [39;49;00m[ 50%] [94mspam.mod1[39;49;00m                                   
[01mhighlighting module code... [39;49;00m[100%] [94mspam.mod2[39;49;00m                                   
[01mwriting additional pages... [39;49;00msearch done
[01mcopying static files... [39;49;00mdone
[01mcopying extra files... [39;49;00mdone
[01mdumping search index in English (code: en)... [39;49;00mdone
[01mdumping object inventory... [39;49;00mdone

# warning: 
[91mWARNING: while setting up extension sphinx.addnodes: node class 'meta' is already registered, its visitors will be overridden[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/index.rst:23: WARNING: Object named 'func1' not found in include file '/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/spam/__init__.py'[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/spam/mod1.py:docstring of spam.mod1.Class3:1: WARNING: duplicate object description of spam.mod3.Class3, other instance in index, use :noindex: for one of them[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/spam/mod1.py:docstring of spam.mod3.Class3.class_attr:1: WARNING: duplicate object description of spam.mod3.Class3.class_attr, other instance in index, use :noindex: for one of them[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:84: WARNING: Error in declarator
If declarator-id with parameters (e.g., 'void f(int arg)'):
  Invalid C declaration: Expected identifier in nested name. [error at 18]
    Sphinx_DoSomething()
    ------------------^
If parenthesis in noptr-declarator (e.g., 'void (*f(int arg))(double)'):
  Error in declarator or parameters
  Invalid C declaration: Expected identifier in nested name. [error at 19]
    Sphinx_DoSomething()
    -------------------^
[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:86: WARNING: Error in declarator or parameters
Invalid C declaration: Expected identifier in nested name. [error at 19]
  SphinxStruct.member
  -------------------^[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:92: WARNING: Error in declarator or parameters
Invalid C declaration: Expected identifier in nested name. [error at 13]
  sphinx_global
  -------------^[39;49;00m
[31m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:155: WARNING: Unknown directive type "userdesc".

.. userdesc:: myobj:parameter

   Description of userdesc.[39;49;00m
[31m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:160: WARNING: Unknown interpreted text role "userdescrole".[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:166: WARNING: Too many template argument lists compared to parameter lists. Argument lists: 1, Parameter lists: 0, Extra empty parameters lists prepended: 1. Declaration:
	n::Array<T, d>[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:117: WARNING: Unparseable C cross-reference: 'SphinxType *'
Invalid C declaration: Expected end of definition. [error at 11]
  SphinxType *
  -----------^[39;49;00m

[31m[1m__________________________ test_viewcode_epub_default __________________________[0m

app = <SphinxTestApp buildername='epub'>
status = <_io.StringIO object at 0x745ab6108550>
warning = <_io.StringIO object at 0x745ab61085f0>

    [0m[37m@pytest[39;49;00m.mark.sphinx([33m'[39;49;00m[33mepub[39;49;00m[33m'[39;49;00m, testroot=[33m'[39;49;00m[33mext-viewcode[39;49;00m[33m'[39;49;00m)[90m[39;49;00m
    [94mdef[39;49;00m [92mtest_viewcode_epub_default[39;49;00m(app, status, warning):[90m[39;49;00m
        app.builder.build_all()[90m[39;49;00m
    [90m[39;49;00m
>       [94massert[39;49;00m [95mnot[39;49;00m (app.outdir / [33m'[39;49;00m[33m_modules/spam/mod1.xhtml[39;49;00m[33m'[39;49;00m).exists()[90m[39;49;00m
[1m[31mE       AssertionError: assert not True[0m
[1m[31mE        +  where True = <bound method path.exists of path('/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/epub/_modules/spam/mod1.xhtml')>()[0m
[1m[31mE        +    where <bound method path.exists of path('/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/epub/_modules/spam/mod1.xhtml')> = (path('/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/epub') / '_modules/spam/mod1.xhtml').exists[0m
[1m[31mE        +      where path('/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/epub') = <SphinxTestApp buildername='epub'>.outdir[0m

[1m[31mtests/test_ext_viewcode.py[0m:56: AssertionError
--------------------------- Captured stdout teardown ---------------------------
# testroot: root
# builder: epub
# srcdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode
# outdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/epub
# status: 
[01mRunning Sphinx v3.5.0+/82ef497a8[39;49;00m
[01mloading pickled environment... [39;49;00mdone
[01mbuilding [epub]: [39;49;00mall source files
[01mupdating environment: [39;49;00m0 added, 0 changed, 0 removed
[01mlooking for now-outdated files... [39;49;00mnone found
[01mpreparing documents... [39;49;00mdone
[01mwriting output... [39;49;00m[ 50%] [32mindex[39;49;00m                                                 
[01mwriting output... [39;49;00m[100%] [32mobjects[39;49;00m                                               
[01mgenerating indices... [39;49;00mgenindex py-modindex done
[01mhighlighting module code... [39;49;00m[ 50%] [94mspam.mod1[39;49;00m                                   
[01mhighlighting module code... [39;49;00m[100%] [94mspam.mod2[39;49;00m                                   
[01mwriting additional pages... [39;49;00mdone
[01mcopying static files... [39;49;00mdone
[01mcopying extra files... [39;49;00mdone
writing mimetype file...
writing META-INF/container.xml file...
writing content.opf file...
writing nav.xhtml file...
writing toc.ncx file...
writing Python.epub file...

# warning: 
[91mWARNING: while setting up extension sphinx.addnodes: node class 'meta' is already registered, its visitors will be overridden[39;49;00m
[91mWARNING: conf value "epub_copyright" (or "copyright")should not be empty for EPUB3[39;49;00m
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[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:117: WARNING: Unparseable C cross-reference: 'SphinxType *'
Invalid C declaration: Expected end of definition. [error at 11]
  SphinxType *
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[33m=============================== warnings summary ===============================[0m
sphinx/util/docutils.py:45
  /home/swe-bench/sphinx-doc__sphinx/sphinx/util/docutils.py:45: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
    __version_info__ = tuple(LooseVersion(docutils.__version__).version)

sphinx/registry.py:22
  /home/swe-bench/sphinx-doc__sphinx/sphinx/registry.py:22: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
    from pkg_resources import iter_entry_points

.tox/py39/lib/python3.9/site-packages/pkg_resources/__init__.py:2832
  /home/swe-bench/sphinx-doc__sphinx/.tox/py39/lib/python3.9/site-packages/pkg_resources/__init__.py:2832: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('sphinxcontrib')`.
  Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages
    declare_namespace(pkg)

sphinx/directives/patches.py:14
  /home/swe-bench/sphinx-doc__sphinx/sphinx/directives/patches.py:14: DeprecationWarning: The `docutils.parsers.rst.directive.html` module will be removed in Docutils 2.0. Since Docutils 0.18, the "Meta" node is defined in `docutils.parsers.rst.directives.misc`.
    from docutils.parsers.rst.directives import html, images, tables

tests/test_ext_viewcode.py::test_viewcode
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tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(addnodes.translatable):

tests/test_ext_viewcode.py::test_viewcode
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    for ref in self.document.traverse(nodes.substitution_reference):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.target):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.block_quote):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.Element):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(addnodes.index):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.section):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.doctest_block):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.citation):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.citation_reference):

tests/test_ext_viewcode.py::test_viewcode
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  /home/swe-bench/sphinx-doc__sphinx/sphinx/builders/latex/transforms.py:36: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for node in self.document.traverse(matcher):  # type: nodes.Element

tests/test_ext_viewcode.py::test_viewcode
tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(matcher):  # type: Element

tests/test_ext_viewcode.py::test_viewcode
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  /home/swe-bench/sphinx-doc__sphinx/sphinx/util/compat.py:44: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for node in self.document.traverse(addnodes.index):

tests/test_ext_viewcode.py::test_viewcode
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    for node in document.traverse(addnodes.index):

tests/test_ext_viewcode.py::test_viewcode
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  /home/swe-bench/sphinx-doc__sphinx/sphinx/domains/math.py:84: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    self.data['has_equations'][docname] = any(document.traverse(math_node))

tests/test_ext_viewcode.py::test_viewcode
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    for node in doctree.traverse(nodes.image):

tests/test_ext_viewcode.py::test_viewcode
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    for node in doctree.traverse(addnodes.download_reference):

tests/test_ext_viewcode.py::test_viewcode
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tests/test_ext_viewcode.py::test_viewcode
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tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(nodes.system_message):

tests/test_ext_viewcode.py::test_viewcode
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    for node in self.document.traverse(addnodes.manpage):

tests/test_ext_viewcode.py::test_viewcode
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    for inline in self.document.traverse(matcher):  # type: nodes.inline

tests/test_ext_viewcode.py::test_viewcode
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  /home/swe-bench/sphinx-doc__sphinx/sphinx/domains/python.py:283: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for node in result.traverse(nodes.Text):

tests/test_ext_viewcode.py::test_viewcode
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  /home/swe-bench/sphinx-doc__sphinx/sphinx/builders/html/__init__.py:422: DeprecationWarning: The frontend.OptionParser class will be replaced by a subclass of argparse.ArgumentParser in Docutils 0.21 or later.
    self.docsettings = OptionParser(

tests/test_ext_viewcode.py: 350 warnings
  /home/swe-bench/miniconda3/envs/sphinx-doc__sphinx__3.5/lib/python3.9/optparse.py:1000: DeprecationWarning: The frontend.Option class will be removed in Docutils 0.21 or later.
    option = self.option_class(*args, **kwargs)

tests/test_ext_viewcode.py: 15 warnings
  /home/swe-bench/sphinx-doc__sphinx/sphinx/domains/c.py:3494: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for node in self.document.traverse(AliasNode):

tests/test_ext_viewcode.py: 15 warnings
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    for node in self.document.traverse(AliasNode):

tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py: 47 warnings
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tests/test_ext_viewcode.py: 30 warnings
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tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py::test_viewcode
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tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py: 39 warnings
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tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py: 15 warnings
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tests/test_ext_viewcode.py: 23 warnings
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tests/test_ext_viewcode.py: 23 warnings
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tests/test_ext_viewcode.py::test_viewcode
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tests/test_ext_viewcode.py: 20 warnings
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tests/test_ext_viewcode.py: 20 warnings
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tests/test_ext_viewcode.py: 20 warnings
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  <template>:401: DeprecationWarning: 'soft_unicode' has been renamed to 'soft_str'. The old name will be removed in MarkupSafe 2.1.

tests/test_ext_viewcode.py: 10 warnings
  /home/swe-bench/sphinx-doc__sphinx/sphinx/util/nodes.py:350: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for img in node.traverse(nodes.image):

tests/test_ext_viewcode.py: 10 warnings
  /home/swe-bench/sphinx-doc__sphinx/sphinx/util/nodes.py:352: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for raw in node.traverse(nodes.raw):

tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
  /home/swe-bench/sphinx-doc__sphinx/sphinx/builders/_epub_base.py:275: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for reference in tree.traverse(nodes.reference):

tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
  /home/swe-bench/sphinx-doc__sphinx/sphinx/builders/_epub_base.py:283: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for target in tree.traverse(nodes.target):

tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
  /home/swe-bench/sphinx-doc__sphinx/sphinx/builders/_epub_base.py:290: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for desc_signature in tree.traverse(addnodes.desc_signature):

tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_default
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
tests/test_ext_viewcode.py::test_viewcode_epub_enabled
  /home/swe-bench/sphinx-doc__sphinx/sphinx/builders/_epub_base.py:340: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for node in tree.traverse(nodes.reference):

tests/test_ext_viewcode.py::test_linkcode
tests/test_ext_viewcode.py::test_linkcode
  /home/swe-bench/sphinx-doc__sphinx/sphinx/ext/linkcode.py:42: PendingDeprecationWarning: nodes.Node.traverse() is obsoleted by Node.findall().
    for objnode in doctree.traverse(addnodes.desc):

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
==================================== PASSES ====================================
--------------------------- Captured stdout teardown ---------------------------
# testroot: root
# builder: epub
# srcdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode
# outdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/epub
# status: 
[01mRunning Sphinx v3.5.0+/82ef497a8[39;49;00m
[01mloading pickled environment... [39;49;00mdone
[01mbuilding [epub]: [39;49;00mall source files
[01mupdating environment: [39;49;00m0 added, 0 changed, 0 removed
[01mlooking for now-outdated files... [39;49;00mnone found
[01mpreparing documents... [39;49;00mdone
[01mwriting output... [39;49;00m[ 50%] [32mindex[39;49;00m                                                 
[01mwriting output... [39;49;00m[100%] [32mobjects[39;49;00m                                               
[01mgenerating indices... [39;49;00mgenindex py-modindex done
[01mhighlighting module code... [39;49;00m[ 50%] [94mspam.mod1[39;49;00m                                   
[01mhighlighting module code... [39;49;00m[100%] [94mspam.mod2[39;49;00m                                   
[01mwriting additional pages... [39;49;00mdone
[01mcopying static files... [39;49;00mdone
[01mcopying extra files... [39;49;00mdone
writing mimetype file...
writing META-INF/container.xml file...
writing content.opf file...
writing nav.xhtml file...
writing toc.ncx file...
writing Python.epub file...

# warning: 
[91mWARNING: while setting up extension sphinx.addnodes: node class 'meta' is already registered, its visitors will be overridden[39;49;00m
[91mWARNING: conf value "epub_copyright" (or "copyright")should not be empty for EPUB3[39;49;00m
[91mWARNING: conf value "version" should not be empty for EPUB3[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:117: WARNING: Unparseable C cross-reference: 'SphinxType *'
Invalid C declaration: Expected end of definition. [error at 11]
  SphinxType *
  -----------^[39;49;00m

--------------------------- Captured stdout teardown ---------------------------
# testroot: root
# builder: html
# srcdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode
# outdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/_build/html
# status: 
[01mRunning Sphinx v3.5.0+/82ef497a8[39;49;00m
[01mloading pickled environment... [39;49;00mfailed
failed: build environment version not current
[01mupdating environment: [39;49;00m[new config] 2 added, 0 changed, 0 removed
[01mreading sources... [39;49;00m[ 50%] [35mindex[39;49;00m                                                
[01mreading sources... [39;49;00m[100%] [35mobjects[39;49;00m                                              
[01mlooking for now-outdated files... [39;49;00mnone found
[01mpickling environment... [39;49;00mdone
[01mchecking consistency... [39;49;00mdone
[01mpreparing documents... [39;49;00mdone
[01mwriting output... [39;49;00m[ 50%] [32mindex[39;49;00m                                                 
[01mwriting output... [39;49;00m[100%] [32mobjects[39;49;00m                                               
[01mgenerating indices... [39;49;00mgenindex py-modindex done
[01mwriting additional pages... [39;49;00msearch done
[01mcopying static files... [39;49;00mdone
[01mcopying extra files... [39;49;00mdone
[01mdumping search index in English (code: en)... [39;49;00mdone
[01mdumping object inventory... [39;49;00mdone

# warning: 
[91mWARNING: while setting up extension sphinx.addnodes: node class 'meta' is already registered, its visitors will be overridden[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/index.rst:23: WARNING: Object named 'func1' not found in include file '/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/spam/__init__.py'[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/spam/mod1.py:docstring of spam.mod1.Class3:1: WARNING: duplicate object description of spam.mod3.Class3, other instance in index, use :noindex: for one of them[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/spam/mod1.py:docstring of spam.mod3.Class3.class_attr:1: WARNING: duplicate object description of spam.mod3.Class3.class_attr, other instance in index, use :noindex: for one of them[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:84: WARNING: Error in declarator
If declarator-id with parameters (e.g., 'void f(int arg)'):
  Invalid C declaration: Expected identifier in nested name. [error at 18]
    Sphinx_DoSomething()
    ------------------^
If parenthesis in noptr-declarator (e.g., 'void (*f(int arg))(double)'):
  Error in declarator or parameters
  Invalid C declaration: Expected identifier in nested name. [error at 19]
    Sphinx_DoSomething()
    -------------------^
[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:86: WARNING: Error in declarator or parameters
Invalid C declaration: Expected identifier in nested name. [error at 19]
  SphinxStruct.member
  -------------------^[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:92: WARNING: Error in declarator or parameters
Invalid C declaration: Expected identifier in nested name. [error at 13]
  sphinx_global
  -------------^[39;49;00m
[31m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:155: WARNING: Unknown directive type "userdesc".

.. userdesc:: myobj:parameter

   Description of userdesc.[39;49;00m
[31m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:160: WARNING: Unknown interpreted text role "userdescrole".[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:166: WARNING: Too many template argument lists compared to parameter lists. Argument lists: 1, Parameter lists: 0, Extra empty parameters lists prepended: 1. Declaration:
	n::Array<T, d>[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode/objects.rst:117: WARNING: Unparseable C cross-reference: 'SphinxType *'
Invalid C declaration: Expected end of definition. [error at 11]
  SphinxType *
  -----------^[39;49;00m

--------------------------- Captured stdout teardown ---------------------------
# testroot: root
# builder: html
# srcdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode-find
# outdir: /tmp/pytest-of-swe-bench/pytest-0/ext-viewcode-find/_build/html
# status: 
[01mRunning Sphinx v3.5.0+/82ef497a8[39;49;00m
[01mbuilding [html]: [39;49;00mall source files
[01mupdating environment: [39;49;00m[new config] 1 added, 0 changed, 0 removed
[01mreading sources... [39;49;00m[100%] [35mindex[39;49;00m                                                
[01mlooking for now-outdated files... [39;49;00mnone found
[01mpickling environment... [39;49;00mdone
[01mchecking consistency... [39;49;00mdone
[01mpreparing documents... [39;49;00mdone
[01mwriting output... [39;49;00m[100%] [32mindex[39;49;00m                                                 
[01mgenerating indices... [39;49;00mgenindex py-modindex done
[01mhighlighting module code... [39;49;00m[ 50%] [94mnot_a_package[39;49;00m                               
[01mhighlighting module code... [39;49;00m[100%] [94mnot_a_package.submodule[39;49;00m                     
[01mwriting additional pages... [39;49;00msearch done
[01mcopying static files... [39;49;00mdone
[01mcopying extra files... [39;49;00mdone
[01mdumping search index in English (code: en)... [39;49;00mdone
[01mdumping object inventory... [39;49;00mdone

# warning: 
[91mWARNING: while setting up extension sphinx.addnodes: node class 'meta' is already registered, its visitors will be overridden[39;49;00m
[91m/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode-find/index.rst:28: WARNING: Object named 'func1' not found in include file '/tmp/pytest-of-swe-bench/pytest-0/ext-viewcode-find/not_a_package/__init__.py'[39;49;00m

============================= slowest 25 durations =============================
1.07s setup    tests/test_ext_viewcode.py::test_viewcode
0.74s call     tests/test_ext_viewcode.py::test_linkcode
0.65s call     tests/test_ext_viewcode.py::test_viewcode
0.40s call     tests/test_ext_viewcode.py::test_local_source_files
0.28s call     tests/test_ext_viewcode.py::test_viewcode_epub_default
0.26s call     tests/test_ext_viewcode.py::test_viewcode_epub_enabled
0.05s setup    tests/test_ext_viewcode.py::test_viewcode_epub_default
0.03s setup    tests/test_ext_viewcode.py::test_linkcode
0.02s setup    tests/test_ext_viewcode.py::test_viewcode_epub_enabled
0.02s setup    tests/test_ext_viewcode.py::test_local_source_files

(5 durations < 0.005s hidden.  Use -vv to show these durations.)
[36m[1m=========================== short test summary info ============================[0m
[32mPASSED[0m tests/test_ext_viewcode.py::[1mtest_viewcode_epub_enabled[0m
[32mPASSED[0m tests/test_ext_viewcode.py::[1mtest_linkcode[0m
[32mPASSED[0m tests/test_ext_viewcode.py::[1mtest_local_source_files[0m
[31mFAILED[0m tests/test_ext_viewcode.py::[1mtest_viewcode[0m - assert '<div class="viewcode-block" id="Class1"><a class="viewcode-back" hr...
[31mFAILED[0m tests/test_ext_viewcode.py::[1mtest_viewcode_epub_default[0m - AssertionError: assert not True
[31m================== [31m[1m2 failed[0m, [32m3 passed[0m, [33m986 warnings[0m[31m in 3.82s[0m[31m ===================[0m
py39: exit 1 (6.27 seconds) /home/swe-bench/sphinx-doc__sphinx> python -X dev -m pytest -rA --durations 25 tests/test_ext_viewcode.py pid=186
  py39: FAIL code 1 (28.67=setup[22.40]+cmd[6.27] seconds)
  evaluation failed :( (29.64 seconds)
ERROR conda.cli.main_run:execute(124): `conda run tox -epy39 -v -- tests/test_ext_viewcode.py` failed. (See above for error)

 
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Return Code: 1 

>>>>> Some Tests Failed
[sphinx-doc__sphinx__3.5] [sphinx-doc__sphinx-8721] Test script run successful 