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CHANGELOG.md

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Master

  • bugfixes in dicom io
  • add --skip_saving argument

Release 1.5.6

  • remove verbose print outs not needed
  • add helper script for manual setup
  • add fast statistics
  • download weights from different server for faster and more stable download
  • fix requests version to avoid urllib3 openssl error
  • minor bugfixes

Release 1.5.5

  • add independent script to download weights
  • bugfixes

Release 1.5.4

  • support dicom input
  • support dicom rt struct output
  • add usage stats

Release 1.5.3

  • Correct wording in error messages
  • add --roi_subset argument
  • Use newer nnunet-customized version to avoid sklearn import error
  • add totalseg_import_weights function
  • add python api

Release 1.5.2

  • bugfix in cucim resampling
  • add 6mm body model
  • multilabel files contain label names in extended header
  • add body model
  • add pleural effusion model
  • remove SimpleITK version requirement

Release 1.4.0

  • bugfixes
  • add lung_vessels model
  • add intracerebral hemorrhage model
  • add coronary artery model
  • preview file was renamed from preview.png to preview_total.png
  • Split very big images into 3 parts and process one by one to avoid memory problems
  • fix: check if input is 4d and then truncate to 3d
  • make it work with windows
  • make it work with cpu

Release 1.3

  • make output spacing exactly match input spacing
  • improve weights download

Release 1.2

  • fix SimpleITK version to 2.0.2 to avoid nifti loading error

Release 1.1

  • Optimise statistics runtime
  • fix server bugs
  • add radiomics feature calculation

Release 1.0

  • Initial release