From 6f8e54d7a9fd09a1388eb96da72ae04ef32ed02a Mon Sep 17 00:00:00 2001 From: Franklin Feingold <35307458+franklin-feingold@users.noreply.github.com> Date: Thu, 11 Jun 2020 13:03:50 -0700 Subject: [PATCH] Update CHANGES --- src/CHANGES.md | 39 +++++++++++++++++++++------------------ 1 file changed, 21 insertions(+), 18 deletions(-) diff --git a/src/CHANGES.md b/src/CHANGES.md index dbba3cc50d..c77219a7a7 100644 --- a/src/CHANGES.md +++ b/src/CHANGES.md @@ -1,7 +1,9 @@ # Changelog -## [v1.4.0](https://bids-specification.readthedocs.io/en/v1.4.0/) (2020-06-12) +## [v1.4.0](https://bids-specification.readthedocs.io/en/v1.4.0/) (2020-06-11) +- \[FIX] Clarify language on unsetting a key/value pair [#495](https://github.com/bids-standard/bids-specification/pull/495) ([nicholst](https://github.com/nicholst)) +- ENH: Add RECOMMENDED DatasetType key to dataset description [#494](https://github.com/bids-standard/bids-specification/pull/494) ([effigies](https://github.com/effigies)) - Clarify mask/dseg/probseg in common derivatives [#489](https://github.com/bids-standard/bids-specification/pull/489) ([effigies](https://github.com/effigies)) - Reorganize derivatives [#488](https://github.com/bids-standard/bids-specification/pull/488) ([effigies](https://github.com/effigies)) - Enh/prov [#486](https://github.com/bids-standard/bids-specification/pull/486) ([satra](https://github.com/satra)) @@ -20,6 +22,7 @@ - \[FIX] fix inconsistencies for task label between sections [#446](https://github.com/bids-standard/bids-specification/pull/446) ([Remi-Gau](https://github.com/Remi-Gau)) - \[FIX] update DECISION-MAKING.md document with new governance [#441](https://github.com/bids-standard/bids-specification/pull/441) ([sappelhoff](https://github.com/sappelhoff)) - \[ENH] Add `res` and `den` keywords to indicate resolution of resampled data [#301](https://github.com/bids-standard/bids-specification/pull/301) ([oesteban](https://github.com/oesteban)) +- \[ENH] BEP 003: Common Derivatives [#265](https://github.com/bids-standard/bids-specification/pull/265) ([effigies](https://github.com/effigies)) - \[ENH] Add Glossary of terms/abbreviations used in the specification [#152](https://github.com/bids-standard/bids-specification/pull/152) ([yarikoptic](https://github.com/yarikoptic)) ## [v1.3.0](https://bids-specification.readthedocs.io/en/v1.3.0/) (2020-04-14) @@ -261,8 +264,8 @@ NumberOfVolumesDiscardedByScanner field \[[4.1 Task (including resting state) imaging data](04-modality-specific-files/01-magnetic-resonance-imaging-data.md#task-including-resting-state-imaging-data)]. -- Added TotalReadoutTime to functional images metadata list -  \[[4.1 Task (including resting state) imaging +- Added TotalReadoutTime to functional images metadata list + \[[4.1 Task (including resting state) imaging data](04-modality-specific-files/01-magnetic-resonance-imaging-data.md#task-including-resting-state-imaging-data)]. ## 1.0.1-rc1 @@ -277,16 +280,16 @@ - Added SoftwareVersions -- Added run-<run_index> to the phase encoding +- Added run-<run_index> to the phase encoding maps. Improved the description. -- Added InversionTime metadata key. +- Added InversionTime metadata key. - Clarification on the source vs raw language. -- Added trial_type column to the event files. +- Added trial_type column to the event files. -- Added missing sub-<participant_label> in +- Added missing sub-<participant_label> in behavioral data file names - Added ability to store stimuli files. @@ -317,10 +320,10 @@ ## 1.0.0-rc3 -- Renamed PhaseEncodingDirection values from “x”, “y”, +- Renamed PhaseEncodingDirection values from “x”, “y”, “z” to “i”, “j”, “k” to avoid confusion with FSL parameters -- Renamed SliceEncodingDirection values from “x”, “y”, +- Renamed SliceEncodingDirection values from “x”, “y”, “z” to “i”, “j”, “k” ## 1.0.0-rc2 @@ -333,39 +336,39 @@ - Make support for uncompressed .nii files more explicit. -- Added BIDSVersion to dataset.json +- Added BIDSVersion to dataset.json -- Remove the statement that SliceEncodingDirection is +- Remove the statement that SliceEncodingDirection is necessary for slice time correction - Change dicom converter recommendation from dcmstack to dcm2nii and dicm2nii following interactions with the community (see -  and + and ). - Added section on behavioral experiments with no accompanying MRI acquisition -- Add \_magnitude.nii\[.gz] image for GE type +- Add \_magnitude.nii\[.gz] image for GE type fieldmaps. -- Replaced EchoTimeDifference with - EchoTime1 and EchoTime2 (SPM toolbox +- Replaced EchoTimeDifference with + EchoTime1 and EchoTime2 (SPM toolbox requires this input). - Added support for single band reference image for DWI. -- Added DatasetDOI field in the dataset +- Added DatasetDOI field in the dataset description. - Added description of more metadata fields relevant to DWI fieldmap correction. -- PhaseEncodingDirection is now expressed in “x”, “y” etc. instead of “PA” +- PhaseEncodingDirection is now expressed in “x”, “y” etc. instead of “PA” “RL” for DWI scans (so it’s the same as BOLD scans) -- Added rec-<label> flag to BOLD files to +- Added rec-<label> flag to BOLD files to distinguish between different reconstruction algorithms (analogous to anatomical scans).