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DICOM tags yaml vs md #1028

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CPernet opened this issue Mar 11, 2022 · 4 comments
Open

DICOM tags yaml vs md #1028

CPernet opened this issue Mar 11, 2022 · 4 comments
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consistency Spec is (potentially) inconsistent schema Issues related to the YAML schema representation of the specification. Patch version release.

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@CPernet
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CPernet commented Mar 11, 2022

a general comment related to #1021

  • metadata.yaml is, in my mind, the BIDS set of definitions and therefore independent of DICOM
  • xxx.md is modality specific and can point to DICOM tags

key thing, a DICOM tag can be ambiguous with slightly different usage according to the modality and that's why i do not think they can be unambiguouly attached to a BIDS metadata definition and consequently, as a rule, the metadata.yaml has no reference to DICOM and tables generation from each modality can add arguments referring to specific DICOM

@CPernet CPernet added the consistency Spec is (potentially) inconsistent label Mar 11, 2022
@tsalo
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tsalo commented Mar 11, 2022

As a rule of thumb, we have generally included the DICOM tags in the object definitions by default, and then moved them to tables if and when we came across cases where the metadata field applied outside of MRI. That said, I don't think anyone is heavily invested in that approach, and just having the DICOM tag in the table seems fine to me.

@tsalo tsalo added the schema Issues related to the YAML schema representation of the specification. Patch version release. label Mar 11, 2022
@Remi-Gau Remi-Gau removed their assignment Jul 31, 2023
@yarikoptic
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@CPernet can you give an example here for me or point to more specific case if it is still present at all?

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@CPernet
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CPernet commented Mar 31, 2024

@CPernet
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CPernet commented Mar 31, 2024

and yes sometimes 'Corresponds to DICOM Tags' means strictly identical over times you can see on the PET spec is a combo of 2 tags or conversely some tags get split into 2 BIDS keys (eg DICOM would report a filter name a parameters together)

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Labels
consistency Spec is (potentially) inconsistent schema Issues related to the YAML schema representation of the specification. Patch version release.
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