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mkdocs ValueError Schema path or paths do not exist #1030

Closed
mateuszpawlik opened this issue Mar 18, 2022 · 7 comments · Fixed by #1032
Closed

mkdocs ValueError Schema path or paths do not exist #1030

mateuszpawlik opened this issue Mar 18, 2022 · 7 comments · Fixed by #1032

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@mateuszpawlik
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Contributor

I want to build the specification with mkdocs but I get multiple ValueError: Schema path or paths do not exist:.

Steps to reproduce:

mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $  python3 -m venv mkdocs-env
mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ source mkdocs-env/bin/activate
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ pip3 install -r requirements.txt
...
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ mkdocs serve

Head of the output:

INFO     -  Building documentation...
INFO     -  [macros] - Macros arguments: {'module_name': 'tools/mkdocs_macros_bids/main', 'modules': [],
            'include_dir': '', 'include_yaml': [], 'j2_block_start_string': '', 'j2_block_end_string': '',
            'j2_variable_start_string': '', 'j2_variable_end_string': '', 'on_undefined': 'keep', 'verbose':
            False}
INFO     -  [macros] - Found local Python module 'tools/mkdocs_macros_bids/main' in:
            /home/mpawlik/Remote/anc/bids-specification
INFO     -  [macros] - Found external Python module 'tools/mkdocs_macros_bids/main' in:
            /home/mpawlik/Remote/anc/bids-specification
INFO     -  [macros] - Extra variables (config file): ['generator', 'social']
INFO     -  [macros] - Extra filters (module): ['pretty']
INFO     -  Cleaning site directory
INFO     -  The following pages exist in the docs directory, but are not included in the "nav" configuration:
              - index.md
              - pregh-changes.md
              - schema/README.md
INFO     -  [macros] - ERROR # _Macro Rendering Error_

            **ValueError**: Schema path or paths do not exist:
            /home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/schemacode/data/schema/objects
            /home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/schemacode/data/schema/rules


            ```
            Traceback (most recent call last):
              File
            "/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/mkdocs_macros/plugin.py",
            line 473, in render
                return md_template.render(**page_variables)
              File
            "/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/jinja2/environment.py",
            line 1291, in render
                self.environment.handle_exception()
              File
            "/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/jinja2/environment.py",
            line 925, in handle_exception
                raise rewrite_traceback_stack(source=source)
              File "<template>", line 462, in top-level template code
              File "/home/mpawlik/Remote/anc/bids-specification/tools/mkdocs_macros_bids/macros.py", line 129, in
            make_metadata_table
                schema_obj = schema.load_schema(schemapath)
              File
            "/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/schemacode/schema.py",
            line 81, in load_schema
                raise ValueError(
            ValueError: Schema path or paths do not exist:
            /home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/schemacode/data/schema/objects
            /home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/schemacode/data/schema/rules

            ```

The documentation doesn't specify any additional steps.
@mateuszpawlik mateuszpawlik mentioned this issue Mar 18, 2022
Closed
@mateuszpawlik
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If it helps I found this:

(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ cd tools/mkdocs_macros_bids/
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification/tools/mkdocs_macros_bids (master) $ python3 
Python 3.9.2 (default, Feb 28 2021, 17:03:44) 
[GCC 10.2.1 20210110] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> from schemacode import render, schema, utils
>>> utils.get_schema_path()
'/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/schemacode/data/schema'
>>>

@sappelhoff
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Member

Could you try to do (from the root of bids-specification/):

python3 -m venv mkdocs-env
pip install -U pip
pip install -r requirements.txt
pip install tools/schemacode/
mkdocs build --clean --strict --verbose

That should pass without errors. With these steps you should also be able to do mkdocs serve without problems.

Interestingly I could replicate your issue even when doing pip install tools/schemacode/ ... a pip install -U pip was needed for this to pass.

@Remi-Gau
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Collaborator

Reading through the Building the specification section I realize that it could be improved and we could thus ensure it works.

https://github.com/bids-standard/bids-specification/blob/master/CONTRIBUTING.md#building-the-specification-using-mkdocs

@sappelhoff sappelhoff mentioned this issue Mar 21, 2022
Merged
@mateuszpawlik
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Contributor Author

It worked now. Thank you. My commands were (pip3 because I'm on Debian):

python3 -m venv mkdocs-env
source mkdocs-env/bin/activate
pip3 install --upgrade pip
pip3 install --requirement requirements.txt
pip3 install tools/schemacode/
mkdocs build --clean --strict --verbose
mkdocs serve

I wasn't aware of tools/schemacode/. I found it late on Friday but couldn't comment.

pip3 install --upgrade pip upgraded my pip version.

Here's the entire output: 
mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ python3 -m venv mkdocs-env
mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ source mkdocs-env/bin/activate
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ pip3 list
Package       Version
------------- -------
pip           20.3.4
pkg-resources 0.0.0
setuptools    44.1.1
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ pip3 install --upgrade pip
Requirement already satisfied: pip in ./mkdocs-env/lib/python3.9/site-packages (20.3.4)
Collecting pip
  Downloading pip-22.0.4-py3-none-any.whl (2.1 MB)
     |████████████████████████████████| 2.1 MB 7.6 MB/s 
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 20.3.4
    Uninstalling pip-20.3.4:
      Successfully uninstalled pip-20.3.4
Successfully installed pip-22.0.4
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ pip3 list
Package       Version
------------- -------
pip           22.0.4
pkg_resources 0.0.0
setuptools    44.1.1
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ pip3 install --requirement requirements.txt
...
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ pip3 list
Package                           Version
--------------------------------- -----------------
click                             8.0.4
ghp-import                        2.0.2
gitdb                             4.0.9
GitPython                         3.1.27
importlib-metadata                4.11.3
Jinja2                            3.0.3
Markdown                          3.3.6
MarkupSafe                        2.1.1
mergedeep                         1.3.4
mkdocs                            1.2.3
mkdocs-branchcustomization-plugin 0.1.3
mkdocs-macros-plugin              0.6.4
mkdocs-material                   8.2.5
mkdocs-material-extensions        1.0.3
numpy                             1.22.3
packaging                         21.3
pandas                            1.4.1
pip                               22.0.4
pkg_resources                     0.0.0
Pygments                          2.11.2
pymdown-extensions                9.3
pyparsing                         3.0.7
python-dateutil                   2.8.2
pytz                              2022.1
PyYAML                            6.0
pyyaml_env_tag                    0.1
schemacode                        1.7.0+16.gba11771
setuptools                        44.1.1
six                               1.16.0
smmap                             5.0.0
tabulate                          0.8.9
termcolor                         1.1.0
watchdog                          2.1.6
zipp                              3.7.0
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ pip3 install tools/schemacode/
Processing ./tools/schemacode
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Preparing metadata (pyproject.toml) ... done
Requirement already satisfied: pandas in ./mkdocs-env/lib/python3.9/site-packages (from schemacode==1.7.0+16.gba11771) (1.4.1)
Requirement already satisfied: numpy in ./mkdocs-env/lib/python3.9/site-packages (from schemacode==1.7.0+16.gba11771) (1.22.3)
Requirement already satisfied: tabulate in ./mkdocs-env/lib/python3.9/site-packages (from schemacode==1.7.0+16.gba11771) (0.8.9)
Requirement already satisfied: pyyaml in ./mkdocs-env/lib/python3.9/site-packages (from schemacode==1.7.0+16.gba11771) (6.0)
Requirement already satisfied: python-dateutil>=2.8.1 in ./mkdocs-env/lib/python3.9/site-packages (from pandas->schemacode==1.7.0+16.gba11771) (2.8.2)
Requirement already satisfied: pytz>=2020.1 in ./mkdocs-env/lib/python3.9/site-packages (from pandas->schemacode==1.7.0+16.gba11771) (2022.1)
Requirement already satisfied: six>=1.5 in ./mkdocs-env/lib/python3.9/site-packages (from python-dateutil>=2.8.1->pandas->schemacode==1.7.0+16.gba11771) (1.16.0)
Building wheels for collected packages: schemacode
  Building wheel for schemacode (pyproject.toml) ... done
  Created wheel for schemacode: filename=schemacode-1.7.0+16.gba11771-py3-none-any.whl size=67433 sha256=0e25582786de5b27a763a666bed8f43c3e04eece8b0d85e844158abf0d9d53a8
  Stored in directory: /tmp/pip-ephem-wheel-cache-z9f74c3w/wheels/13/5e/c7/4b88fda411d07fd6c408367e07fa82d7b36f35523acae3adc8
Successfully built schemacode
Installing collected packages: schemacode
  Attempting uninstall: schemacode
    Found existing installation: schemacode 1.7.0+16.gba11771
    Uninstalling schemacode-1.7.0+16.gba11771:
      Successfully uninstalled schemacode-1.7.0+16.gba11771
Successfully installed schemacode-1.7.0+16.gba11771
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ mkdocs build --clean --strict --verbose
DEBUG    -  Loading configuration file: /home/mpawlik/Remote/anc/bids-specification/mkdocs.yml
DEBUG    -  Loaded theme configuration for 'material' from '/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/material/mkdocs_theme.yml':
            {'language': 'en', 'direction': None, 'features': [], 'palette': {'primary': None, 'accent': None}, 'font': {'text': 'Roboto', 'code': 'Roboto Mono'}, 'icon':
            None, 'favicon': 'assets/images/favicon.png', 'include_search_page': False, 'search_index_only': True, 'static_templates': ['404.html']}
DEBUG    -  Config value: 'config_file_path' = '/home/mpawlik/Remote/anc/bids-specification/mkdocs.yml'
DEBUG    -  Config value: 'site_name' = 'Brain Imaging Data Structure v1.7.1-dev'
DEBUG    -  Config value: 'nav' = [{'The BIDS Specification': [{'Introduction': '01-introduction.md'}, {'Common principles': '02-common-principles.md'}, {'Modality
            agnostic files': '03-modality-agnostic-files.md'}, {'Modality specific files': [{'Magnetic Resonance Imaging':
            '04-modality-specific-files/01-magnetic-resonance-imaging-data.md'}, {'Magnetoencephalography': '04-modality-specific-files/02-magnetoencephalography.md'},
            {'Electroencephalography': '04-modality-specific-files/03-electroencephalography.md'}, {'Intracranial Electroencephalography':
            '04-modality-specific-files/04-intracranial-electroencephalography.md'}, {'Task events': '04-modality-specific-files/05-task-events.md'}, {'Physiological and
            other continuous recordings': '04-modality-specific-files/06-physiological-and-other-continuous-recordings.md'}, {'Behavioral experiments (with no neural
            recordings)': '04-modality-specific-files/07-behavioral-experiments.md'}, {'Genetic Descriptor': '04-modality-specific-files/08-genetic-descriptor.md'},
            {'Positron Emission Tomography': '04-modality-specific-files/09-positron-emission-tomography.md'}, {'Microscopy':
            '04-modality-specific-files/10-microscopy.md'}]}, {'Derivatives': [{'BIDS Derivatives': '05-derivatives/01-introduction.md'}, {'Common data types and
            metadata': '05-derivatives/02-common-data-types.md'}, {'Imaging data types': '05-derivatives/03-imaging.md'}]}, {'Longitudinal and multi-site studies':
            '06-longitudinal-and-multi-site-studies.md'}, {'BIDS Extension Proposals': '07-extensions.md'}, {'Appendix': [{'Contributors':
            '99-appendices/01-contributors.md'}, {'Licenses': '99-appendices/02-licenses.md'}, {'Hierarchical Event Descriptors': '99-appendices/03-hed.md'}, {'Entity
            table': '99-appendices/04-entity-table.md'}, {'Units': '99-appendices/05-units.md'}, {'MEG file formats': '99-appendices/06-meg-file-formats.md'}, {'MEG
            systems': '99-appendices/07-meg-systems.md'}, {'Coordinate systems': '99-appendices/08-coordinate-systems.md'}, {'Entities': '99-appendices/09-entities.md'},
            {'File collections': '99-appendices/10-file-collections.md'}, {'Quantitative MRI': '99-appendices/11-qmri.md'}, {'Arterial Spin Labeling':
            '99-appendices/12-arterial-spin-labeling.md'}, {'Cross modality correspondence': '99-appendices/13-cross-modality-correspondence.md'}, {'Glossary':
            '99-appendices/14-glossary.md'}]}, {'Changelog': 'CHANGES.md'}]}, {'The BIDS Starter Kit': [{'Website': 'https://bids-standard.github.io/bids-starter-kit'},
            {'Tutorials': 'https://bids-standard.github.io/bids-starter-kit/tutorials/tutorials.html'}, {'GitHub repository':
            'https://github.com/bids-standard/bids-starter-kit'}]}]
DEBUG    -  Config value: 'pages' = None
DEBUG    -  Config value: 'site_url' = 'https://bids-specification.readthedocs.io/en/stable/'
DEBUG    -  Config value: 'site_description' = None
DEBUG    -  Config value: 'site_author' = None
DEBUG    -  Config value: 'theme' = Theme(name='material', dirs=['/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/material',
            '/home/mpawlik/Remote/anc/bids-specification/mkdocs-env/lib/python3.9/site-packages/mkdocs/templates'], static_templates=['404.html', 'sitemap.xml'],
            locale=Locale(language='en', territory=''), language='en', direction=None, features=['navigation.sections'], palette={'primary': None, 'accent': None},
            font={'text': 'Roboto', 'code': 'Roboto Mono'}, icon=None, favicon='images/favicon.png', include_search_page=False, search_index_only=True,
            logo='images/logo.png')
DEBUG    -  Config value: 'docs_dir' = '/home/mpawlik/Remote/anc/bids-specification/src'
DEBUG    -  Config value: 'site_dir' = '/home/mpawlik/Remote/anc/bids-specification/site'
DEBUG    -  Config value: 'copyright' = 'Copyright &copy; 2018-2022, BIDS Contributors - <a href="https://creativecommons.org/licenses/by/4.0/">CC BY 4.0</a>'
DEBUG    -  Config value: 'google_analytics' = None
DEBUG    -  Config value: 'dev_addr' = Address(host='127.0.0.1', port=8000)
DEBUG    -  Config value: 'use_directory_urls' = False
DEBUG    -  Config value: 'repo_url' = ''
DEBUG    -  Config value: 'repo_name' = ''
DEBUG    -  Config value: 'edit_uri' = ''
DEBUG    -  Config value: 'extra_css' = []
DEBUG    -  Config value: 'extra_javascript' = ['js/jquery-3.6.0.min.js']
DEBUG    -  Config value: 'extra_templates' = []
DEBUG    -  Config value: 'markdown_extensions' = ['toc', 'tables', 'fenced_code', 'pymdownx.superfences']
DEBUG    -  Config value: 'mdx_configs' = {'toc': {'anchorlink': True}}
DEBUG    -  Config value: 'strict' = True
DEBUG    -  Config value: 'remote_branch' = 'gh-pages'
DEBUG    -  Config value: 'remote_name' = 'origin'
DEBUG    -  Config value: 'extra' = {'generator': False, 'social': [{'icon': 'fontawesome/brands/twitter', 'link': 'https://twitter.com/BIDSstandard/'}, {'icon':
            'fontawesome/brands/github', 'link': 'https://github.com/bids-standard/bids-specification/'}, {'icon': 'fontawesome/brands/google', 'link':
            'https://groups.google.com/g/bids-discussion'}]}
DEBUG    -  Config value: 'plugins' = PluginCollection([('search', <material.plugins.search.plugin.SearchPlugin object at 0x7fb93601e9a0>), ('branchcustomization',
            <mkdocs_branchcustomization_plugin.plugin.BranchPlugin object at 0x7fb935fb3100>), ('macros', <mkdocs_macros.plugin.MacrosPlugin object at 0x7fb935fded30>)])
DEBUG    -  Detected HEAD name: master
INFO     -  [macros] - Macros arguments: {'module_name': 'tools/mkdocs_macros_bids/main', 'modules': [], 'include_dir': '', 'include_yaml': [],
            'j2_block_start_string': '', 'j2_block_end_string': '', 'j2_variable_start_string': '', 'j2_variable_end_string': '', 'on_undefined': 'keep', 'verbose': False}
DEBUG    -  [macros] - Project dir '/home/mpawlik/Remote/anc/bids-specification'
INFO     -  [macros] - Found local Python module 'tools/mkdocs_macros_bids/main' in: /home/mpawlik/Remote/anc/bids-specification
INFO     -  [macros] - Found external Python module 'tools/mkdocs_macros_bids/main' in: /home/mpawlik/Remote/anc/bids-specification
DEBUG    -  [macros] - Variables: ['extra', 'config', 'environment', 'plugin', 'git', 'generator', 'social']
INFO     -  [macros] - Extra variables (config file): ['generator', 'social']
DEBUG    -  [macros] - Content of extra variables (config file): {'generator': False, 'social': [{'icon': 'fontawesome/brands/twitter', 'link':
            'https://twitter.com/BIDSstandard/'}, {'icon': 'fontawesome/brands/github', 'link': 'https://github.com/bids-standard/bids-specification/'}, {'icon':
            'fontawesome/brands/google', 'link': 'https://groups.google.com/g/bids-discussion'}]}
INFO     -  [macros] - Extra filters (module): ['pretty']
DEBUG    -  [macros] - Docs directory: /home/mpawlik/Remote/anc/bids-specification/src
DEBUG    -  [macros] - Includes directory: /home/mpawlik/Remote/anc/bids-specification/src
DEBUG    -  [macros] - Undefined behavior: <class 'jinja2.runtime.DebugUndefined'>
INFO     -  Cleaning site directory
INFO     -  Building documentation to directory: /home/mpawlik/Remote/anc/bids-specification/site
INFO     -  The following pages exist in the docs directory, but are not included in the "nav" configuration:
              - index.md
              - pregh-changes.md
              - schema/README.md
DEBUG    -  An external link to 'https://bids-standard.github.io/bids-starter-kit' is included in the 'nav' configuration.
DEBUG    -  An external link to 'https://bids-standard.github.io/bids-starter-kit/tutorials/tutorials.html' is included in the 'nav' configuration.
DEBUG    -  An external link to 'https://github.com/bids-standard/bids-starter-kit' is included in the 'nav' configuration.
DEBUG    -  Reading markdown pages.
DEBUG    -  Reading: index.md
DEBUG    -  Reading: 01-introduction.md
DEBUG    -  Reading: 02-common-principles.md
DEBUG    -  Reading: 03-modality-agnostic-files.md
DEBUG    -  Reading: 06-longitudinal-and-multi-site-studies.md
DEBUG    -  Reading: 07-extensions.md
DEBUG    -  Reading: CHANGES.md
DEBUG    -  Reading: pregh-changes.md
DEBUG    -  Reading: 04-modality-specific-files/01-magnetic-resonance-imaging-data.md
DEBUG    -  Reading: 04-modality-specific-files/02-magnetoencephalography.md
DEBUG    -  Reading: 04-modality-specific-files/03-electroencephalography.md
DEBUG    -  Reading: 04-modality-specific-files/04-intracranial-electroencephalography.md
DEBUG    -  Reading: 04-modality-specific-files/05-task-events.md
DEBUG    -  Reading: 04-modality-specific-files/06-physiological-and-other-continuous-recordings.md
DEBUG    -  Reading: 04-modality-specific-files/07-behavioral-experiments.md
DEBUG    -  Reading: 04-modality-specific-files/08-genetic-descriptor.md
DEBUG    -  Reading: 04-modality-specific-files/09-positron-emission-tomography.md
DEBUG    -  Reading: 04-modality-specific-files/10-microscopy.md
DEBUG    -  Reading: 05-derivatives/01-introduction.md
DEBUG    -  Reading: 05-derivatives/02-common-data-types.md
DEBUG    -  Reading: 05-derivatives/03-imaging.md
DEBUG    -  Reading: 99-appendices/01-contributors.md
DEBUG    -  Reading: 99-appendices/02-licenses.md
DEBUG    -  Reading: 99-appendices/03-hed.md
DEBUG    -  Reading: 99-appendices/04-entity-table.md
DEBUG    -  Reading: 99-appendices/05-units.md
DEBUG    -  Reading: 99-appendices/06-meg-file-formats.md
DEBUG    -  Reading: 99-appendices/07-meg-systems.md
DEBUG    -  Reading: 99-appendices/08-coordinate-systems.md
DEBUG    -  Reading: 99-appendices/09-entities.md
DEBUG    -  Reading: 99-appendices/10-file-collections.md
DEBUG    -  Reading: 99-appendices/11-qmri.md
DEBUG    -  Reading: 99-appendices/12-arterial-spin-labeling.md
DEBUG    -  Reading: 99-appendices/13-cross-modality-correspondence.md
DEBUG    -  Reading: 99-appendices/14-glossary.md
DEBUG    -  Reading: schema/README.md
DEBUG    -  Copying static assets.
DEBUG    -  Copying media file: '04-modality-specific-files/images/PET_scan_overview.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/PET_scan_overview.svg'
DEBUG    -  Copying media file: '04-modality-specific-files/images/asl_flowchart.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/asl_pasl_boluscutoff_false.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/asl_pasl_boluscutoff_true_q2tips.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/asl_pasl_boluscutoff_true_quipssII.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/asl_pcasl_labeling_pulses.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/asl_pcasl_sequence.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/ieeg_electrodes1.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/ieeg_electrodes2.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/microscopy_chunks1.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/microscopy_chunks2.png'
DEBUG    -  Copying media file: '04-modality-specific-files/images/microscopy_sem_overview.jpg'
DEBUG    -  Copying media file: '04-modality-specific-files/images/sub-0001_ses-001_acq-NAS_photo.jpg'
DEBUG    -  Copying media file: 'css/watermark.css'
DEBUG    -  Copying media file: 'images/draft_watermark.png'
DEBUG    -  Copying media file: 'images/favicon.png'
DEBUG    -  Copying media file: 'images/logo.png'
DEBUG    -  Copying media file: 'js/jquery-3.6.0.min.js'
DEBUG    -  Copying media file: 'schema/objects/associated_data.yaml'
DEBUG    -  Copying media file: 'schema/objects/columns.yaml'
DEBUG    -  Copying media file: 'schema/objects/datatypes.yaml'
DEBUG    -  Copying media file: 'schema/objects/entities.yaml'
DEBUG    -  Copying media file: 'schema/objects/metadata.yaml'
DEBUG    -  Copying media file: 'schema/objects/modalities.yaml'
DEBUG    -  Copying media file: 'schema/objects/suffixes.yaml'
DEBUG    -  Copying media file: 'schema/objects/top_level_files.yaml'
DEBUG    -  Copying media file: 'schema/rules/associated_data.yaml'
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INFO     -  Documentation built in 63.00 seconds
(mkdocs-env) mpawlik@erdwolf:~/Remote/anc/bids-specification (master) $ mkdocs serve
INFO     -  Building documentation...
INFO     -  [macros] - Macros arguments: {'module_name': 'tools/mkdocs_macros_bids/main', 'modules': [], 'include_dir': '', 'include_yaml': [],
            'j2_block_start_string': '', 'j2_block_end_string': '', 'j2_variable_start_string': '', 'j2_variable_end_string': '', 'on_undefined': 'keep', 'verbose': False}
INFO     -  [macros] - Found local Python module 'tools/mkdocs_macros_bids/main' in: /home/mpawlik/Remote/anc/bids-specification
INFO     -  [macros] - Found external Python module 'tools/mkdocs_macros_bids/main' in: /home/mpawlik/Remote/anc/bids-specification
INFO     -  [macros] - Extra variables (config file): ['generator', 'social']
INFO     -  [macros] - Extra filters (module): ['pretty']
INFO     -  Cleaning site directory
INFO     -  The following pages exist in the docs directory, but are not included in the "nav" configuration:
              - index.md
              - pregh-changes.md
              - schema/README.md
INFO     -  Documentation built in 68.75 seconds
INFO     -  [09:41:30] Serving on http://127.0.0.1:8000/en/stable/

@Remi-Gau
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@mateuszpawlik
maybe have a quick look at #1032 to make sure that the updated install instructions make sense to you.

@Remi-Gau
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@mateuszpawlik maybe have a quick look at #1032 to make sure that the updated install instructions make sense to you.

If you have time. :-)

@mateuszpawlik
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pip3 install tools/schemacode/ can be dropped because it is redundant - it's part of requirements.txt.

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[MISC] Rewrite and update html build instructions sappelhoff/bids-specification
3 participants
@Remi-Gau @mateuszpawlik @sappelhoff