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The DataFrame does contain a column called "read count" and "UMI count", but both are smaller than the number of non-zero entries per cell. What is the best way to add the "total_count" to obs?
The text was updated successfully, but these errors were encountered:
Hi,
I am trying to run scFoundation on the Adamson data (https://figshare.com/articles/dataset/scFoundation_Large_Scale_Foundation_Model_on_Single-cell_Transcriptomics_-_processed_datasets/24049200?file=44498684), but noticed that it is missing the
"total_count"
column in theobs
DataFrame:The DataFrame does contain a column called
"read count"
and"UMI count"
, but both are smaller than the number of non-zero entries per cell. What is the best way to add the"total_count"
toobs
?The text was updated successfully, but these errors were encountered: