diff --git a/src/pyobo/gilda_utils.py b/src/pyobo/gilda_utils.py index d0d9ae54..d6be2ae5 100644 --- a/src/pyobo/gilda_utils.py +++ b/src/pyobo/gilda_utils.py @@ -138,7 +138,13 @@ def get_grounder( def _fast_term( - *, text: str, prefix: str, identifier: str, name: str, status: str, organism: Optional[str] = None + *, + text: str, + prefix: str, + identifier: str, + name: str, + status: str, + organism: Optional[str] = None, ) -> gilda.term.Term: return gilda.term.Term( norm_text=normalize(text), diff --git a/src/pyobo/sources/ror.py b/src/pyobo/sources/ror.py index 79bf5784..b08be991 100644 --- a/src/pyobo/sources/ror.py +++ b/src/pyobo/sources/ror.py @@ -100,7 +100,7 @@ def iterate_ror_terms(*, force: bool = False) -> Iterable[Term]: ) for label in record.get("labels", []): - label = label["label"] # there's a language availabel in this dict too + label = label["label"] # there's a language availabel in this dict too term.append_synonym(label) if label.startswith("The "): term.append_synonym(label.removeprefix("The ")) diff --git a/src/pyobo/struct/reference.py b/src/pyobo/struct/reference.py index dba6591a..a17cb1c6 100644 --- a/src/pyobo/struct/reference.py +++ b/src/pyobo/struct/reference.py @@ -48,7 +48,7 @@ def validate_identifier(cls, values): # noqa @classmethod def auto(cls, prefix: str, identifier: str) -> "Reference": - """Create a reference and auto-populate its name.""" + """Create a reference and autopopulate its name.""" from ..api import get_name name = get_name(prefix, identifier)