01 model entities

The two main agents (model entities) in cystiSim are pigs and humans. Each of these agents are characterized by a set of individual properties (state variables).

Pigs

age	Age of the pig in months
cysti	Is the pig infected with mature cysts?
cysti_immature	Is the pig infected with immature cysts?
time_since_infection	Time in months since initial infection
intensity	Level of infection intensity (high or low)
immunity	Immunity 'counter'
time_since_vaccination	Time since vaccination 'counter'
slaughtered	Is the pig slaughtered?

Humans

age	Age of the human in months
sex	Sex of the human
taenia	Is the human infected with mature Taenia?
taenia_immature	Is the human infected with immature Taenia?
time_since_infection	Time in months since initial infection
environment	Is the human environment contaminated?
time_since_contamination	Time in months since environmental contamination