From b2ab8800407a79543ebb9c73142c9efb843504d6 Mon Sep 17 00:00:00 2001 From: Louis Bergelson Date: Tue, 14 Aug 2018 14:20:12 -0400 Subject: [PATCH] fixing Travis's link to docker test failure reports --- .travis.yml | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/.travis.yml b/.travis.yml index 719d4530524..d293bdea7dd 100644 --- a/.travis.yml +++ b/.travis.yml @@ -146,7 +146,10 @@ script: sudo mkdir -p build/reports/; sudo chmod -R a+w build/reports/; cp scripts/docker/dockertest.gradle .; - sudo docker run -v $(pwd):/gatkCloneMountPoint:cached -v $(pwd)/testJars:/jars:cached --rm -e "TEST_VERBOSITY=minimal" -e "TEST_TYPE=${TEST_TYPE}" -t broadinstitute/gatk:${DOCKER_TAG} bash --init-file /gatk/gatkenv.rc /root/run_unit_tests.sh && sudo mkdir build/reports/tests/test && sudo cp -rp build/reports/tests/testOnPackagedReleaseJar/* build/reports/tests/test && sudo rm -r build/reports/tests/testOnPackagedReleaseJar; + sudo docker run -v $(pwd):/gatkCloneMountPoint:cached -v $(pwd)/testJars:/jars:cached --rm -e "TEST_VERBOSITY=minimal" -e "TEST_TYPE=${TEST_TYPE}" -t broadinstitute/gatk:${DOCKER_TAG} bash --init-file /gatk/gatkenv.rc /root/run_unit_tests.sh; + TEST_EXIT_VALUE=$?; + sudo mkdir build/reports/tests/test && sudo cp -rp build/reports/tests/testOnPackagedReleaseJar/* build/reports/tests/test && sudo rm -r build/reports/tests/testOnPackagedReleaseJar; + $( exit ${TEST_EXIT_VALUE} ); else ./gatk PrintReads -I src/test/resources/NA12878.chr17_69k_70k.dictFix.bam -O output.bam; travis_wait 50 ./gradlew jacocoTestReport;