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SSREnricher V1.1

This software can automatically enrich polymorphic SSRs with transcripts. SSREnricher schematic diagram

What does SSREnricher do

This software can automatically enrich polymorphic SSRs.

You just need to select all of your fasta files from Trinity and run this software.

We have two versions for different users, one running on Linux or macOS with a graphical interface, and another one running in the shell. GUI version of SSREnricher Command-line version of SSREnricher

Dependencies

You need to install the following software and add to environment variables first: Biopython Perl CD-HIT muscle