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OpenPBTA: Update the BED region file used for the denominator in mutational-signatures #5

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cansavvy opened this issue Dec 18, 2019 · 0 comments
Open

OpenPBTA: Update the BED region file used for the denominator in mutational-signatures #5

cansavvy opened this issue Dec 18, 2019 · 0 comments

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@cansavvy
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Currently, the Strelka2 BED file is being used, but to better reflect the effectively surveyed genome size, this should be switched to the intersection BED regions file used for TMB.

Related issue: AlexsLemonade/OpenPBTA-analysis#351
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@cansavvy