pyproject.toml

[tool.poetry]
name = "tracegroomer"
version = "0.1.4"
description = "Convert and normalise metabolomics data formats (preprocessing for DIMet)"
authors = [
  "Johanna Galvis Rodriguez <deisy-johanna.galvis-rodriguez@u-bordeaux.fr>",
  "Benjamin Dartigues <benjamin.dartigues@u-bordeaux.fr>",
  "Helge Hecht <helge.hecht@recetox.muni.cz>",
  "Slim Karkar <slim.karkar@u-bordeaux.fr>",
  "Bjorn Gruening <bjoern.gruening@gmail.com>",
  "Macha Nikolski <macha.nikolski@u-bordeaux.fr>"
]
maintainers = [ "Benjamin Dartigues <benjamin.dartigues@u-bordeaux.fr>" ,
  "Johanna Galvis Rodriguez <deisy-johanna.galvis-rodriguez@u-bordeaux.fr>"
]
repository = "https://github.com/cbib/TraceGroomer.git"
license = "MIT"
readme = "README.md"

[tool.poetry.dependencies]
python = "^3.10"
Sphinx = "^7.2.6"
click = "^8.1.7"
matplotlib = "^3.8.2"
mypy = "^1.8.0"
numpy = "^1.26.4"
pandas = "^2.2.0"
scipy = "^1.12.0"
scikit-learn = "^1.4.0"
seaborn = "^0.13.2"
openpyxl = "^3.1.2"
PyYAML = "^6.0.1"
python-dotenv = "^1.0.1"
pydantic = "^1.10.8"

[tool.poetry.group.dev.dependencies]
pytest = "^8.0.0"
pytest-cov = "^4.1.0"
coverage = "^7.4.1"
flake8 = "^7.0.0"
exceptiongroup = "^1.2.0"
mypy = "*"
sphinx = "*"
tomli = "^2.0.1"

[tool.poetry.scripts]
tracegroomer = "tracegroomer.__main__:main"

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"