From 398d6192a55d67a5d419e3975f310bbd34300a2b Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kadir=20=C3=87even?= <kadir.ceven@uni-goettingen.de>
Date: Sat, 25 May 2024 03:02:26 +0200
Subject: [PATCH] Fix the documenter

---
 docs/Project.toml                   |  1 -
 docs/make.jl                        | 26 ++++++++------------------
 docs/package.json                   |  0
 docs/src/.vitepress/config.mts      |  0
 docs/src/.vitepress/theme/index.ts  |  0
 docs/src/.vitepress/theme/style.css |  0
 docs/src/index.md                   | 12 +++++-------
 docs/src/lib/public.md              | 22 ----------------------
 docs/src/manual/lattices.md         |  5 -----
 9 files changed, 13 insertions(+), 53 deletions(-)
 mode change 100755 => 100644 docs/package.json
 mode change 100755 => 100644 docs/src/.vitepress/config.mts
 mode change 100755 => 100644 docs/src/.vitepress/theme/index.ts
 mode change 100755 => 100644 docs/src/.vitepress/theme/style.css
 delete mode 100644 docs/src/lib/public.md
 delete mode 100644 docs/src/manual/lattices.md

diff --git a/docs/Project.toml b/docs/Project.toml
index 9b094bf..9441786 100644
--- a/docs/Project.toml
+++ b/docs/Project.toml
@@ -1,4 +1,3 @@
 [deps]
 Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
 DocumenterVitepress = "4710194d-e776-4893-9690-8d956a29c365"
-NeuralQuantumStates = "0d106a18-caf6-4288-a3af-53d8e0520c36"
diff --git a/docs/make.jl b/docs/make.jl
index bba377f..9aeccbc 100644
--- a/docs/make.jl
+++ b/docs/make.jl
@@ -1,34 +1,24 @@
-using NeuralQuantumStates
-using Documenter
-using DocumenterVitepress
+using Documenter, DocumenterVitepress
 
-DocMeta.setdocmeta!(NeuralQuantumStates, :DocTestSetup, :(using NeuralQuantumStates); recursive=true)
+using NeuralQuantumStates
 
 makedocs(;
     modules=[NeuralQuantumStates],
-    repo=Remotes.GitHub("cevenkadir", "NeuralQuantumStates.jl"),
     authors="Kadir Çeven",
-    sitename="NeuralQuantumStates.jl",
+    repo="https://github.com/cevenkadir/NeuralQuantumStates.jl",
+    sitename="Chairmarks.jl",
     format=DocumenterVitepress.MarkdownVitepress(
         repo="https://github.com/cevenkadir/NeuralQuantumStates.jl",
         devurl="dev",
-        deploy_url="https://cevenkadir.github.io/NeuralQuantumStates.jl",
+        deploy_url="cevenkadir.github.io/NeuralQuantumStates.jl",
     ),
     pages=[
         "Home" => "index.md",
-        "Manual" => Any[
-            "Lattices"=>"manual/lattices.md",
-        ],
-        "Reference" => Any[
-            "Public API"=>"lib/public.md",
-        ],
-    ]
+    ],
+    warnonly=true,
 )
 
 deploydocs(;
     repo="github.com/cevenkadir/NeuralQuantumStates.jl",
-    target="build", # this is where Vitepress stores its output
-    devbranch="main",
-    branch="gh-pages",
-    push_preview=true
+    push_preview=true,
 )
diff --git a/docs/package.json b/docs/package.json
old mode 100755
new mode 100644
diff --git a/docs/src/.vitepress/config.mts b/docs/src/.vitepress/config.mts
old mode 100755
new mode 100644
diff --git a/docs/src/.vitepress/theme/index.ts b/docs/src/.vitepress/theme/index.ts
old mode 100755
new mode 100644
diff --git a/docs/src/.vitepress/theme/style.css b/docs/src/.vitepress/theme/style.css
old mode 100755
new mode 100644
diff --git a/docs/src/index.md b/docs/src/index.md
index 74fff49..922d26e 100644
--- a/docs/src/index.md
+++ b/docs/src/index.md
@@ -1,9 +1,7 @@
-```@meta
-CurrentModule = NeuralQuantumStates
-```
-
-# NeuralQuantumStates
-
-Documentation for [NeuralQuantumStates](https://github.com/cevenkadir/NeuralQuantumStates.jl).
+# NeuralQuantumStates.jl
 
+Documentation for `NeuralQuantumStates.jl`.
 
+```@autodocs
+Modules=[NeuralQuantumStates]
+```
diff --git a/docs/src/lib/public.md b/docs/src/lib/public.md
deleted file mode 100644
index 2bd762a..0000000
--- a/docs/src/lib/public.md
+++ /dev/null
@@ -1,22 +0,0 @@
-```@meta
-CurrentModule = NeuralQuantumStates
-```
-
-# Public API
-
-## Contents
-
-```@contents
-Pages = ["public.md"]
-Depth = 2
-```
-
-## Index
-
-```@index
-Pages = ["public.md"]
-```
-
-```@autodocs
-Modules = [NeuralQuantumStates, NeuralQuantumStates.Lattices]
-```
\ No newline at end of file
diff --git a/docs/src/manual/lattices.md b/docs/src/manual/lattices.md
deleted file mode 100644
index 1a3e7ba..0000000
--- a/docs/src/manual/lattices.md
+++ /dev/null
@@ -1,5 +0,0 @@
-```@meta
-CurrentModule = NeuralQuantumStates
-```
-
-# Lattices
\ No newline at end of file