diff --git a/Singularity b/Singularity index f710eb760..d2e8f7e4f 100644 --- a/Singularity +++ b/Singularity @@ -160,7 +160,7 @@ From: python:3.8 micall micall_kive_resistance "$@" %apprun denovo - python /opt/micall/micall_kive.py --denovo "$@" + micall micall_kive --denovo "$@" %applabels denovo KIVE_INPUTS sample_info_csv fastq1 fastq2 bad_cycles_csv