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change the way to display Unit and Quantity (#44)
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* change the way to display `Unit` and `Quantity`

* upgrade the display of dimensionless

* update

* update tests

* update dimensionless name

* fix tests
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chaoming0625 authored Aug 23, 2024
1 parent 8608358 commit f6456ab
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Showing 4 changed files with 192 additions and 113 deletions.
133 changes: 87 additions & 46 deletions brainunit/_base.py
Original file line number Diff line number Diff line change
Expand Up @@ -43,6 +43,7 @@
'is_unitless',
'get_dim',
'get_unit',
'display_in_unit',

# functions for checking
'check_dims',
Expand Down Expand Up @@ -255,6 +256,10 @@ def assert_quantity(
}


def _is_tracer(x):
return isinstance(x, (jax.ShapeDtypeStruct, jax.core.ShapedArray, DynamicJaxprTracer))


class Dimension:
"""
Stores the indices of the 7 basic SI unit dimension (length, mass, etc.).
Expand Down Expand Up @@ -408,7 +413,7 @@ def __ipow__(self, value):
def __eq__(self, value: 'Dimension'):
try:
return np.allclose(self._dims, value._dims)
except AttributeError:
except (AttributeError, jax.errors.TracerArrayConversionError):
# Only compare equal to another Dimensions object
return False

Expand All @@ -430,6 +435,9 @@ def __reduce__(self):
def __deepcopy__(self, memodict):
return self

def __hash__(self):
return hash(self._dims)


@set_module_as('brainunit')
def get_or_create_dimension(*args, **kwds) -> Dimension:
Expand Down Expand Up @@ -861,8 +869,9 @@ def fail_for_unit_mismatch(
@set_module_as('brainunit')
def display_in_unit(
x: jax.typing.ArrayLike | 'Quantity',
u: 'Unit',
precision: Optional[int] = None
u: 'Unit' = None,
precision: Optional[int] = None,
python_code: bool = True
) -> str:
"""
Display a value in a certain unit with a given precision.
Expand Down Expand Up @@ -905,8 +914,9 @@ def display_in_unit(
Array.in_unit
"""
x = _to_quantity(x)
fail_for_unit_mismatch(x, u, 'Non-matching unit for function "in_unit"')
return x.in_unit(u).repr_in_unit(precision=precision)
if u is not None:
x = x.in_unit(u)
return x.repr_in_unit(precision=precision, python_code=python_code)


@set_module_as('brainunit')
Expand Down Expand Up @@ -1134,6 +1144,49 @@ def _assert_same_base(u1, u2):
f"But we got {u1.base} != {u1.base}.")


def _create_name(dim: Dimension, base, scale) -> str:
if dim == DIMENSIONLESS:
name = f"Unit({base}^{scale})"
else:
if _is_tracer(scale) or scale == 0.:
name = f"{dim}"
else:
name = f"{base}^{scale} * {dim}"
return name


def _find_name(dim: Dimension, base, scale) -> Tuple[str, str]:
if dim == DIMENSIONLESS:
name = f"Unit({base}^{scale})"
return name, name

if isinstance(base, (int, float)):
if isinstance(scale, (int, float)):
key = (dim, scale, base)
if key in _standard_units:
name = _standard_units[key].name
return name, name
else:
key = (dim, 0, base)
if key in _standard_units:
name = _standard_units[key].name
return name, name

name = _create_name(dim, base, scale)
return name, name


_standard_units: Dict[Tuple, 'Unit'] = {}


def add_standard_unit(u: 'Unit'):
if isinstance(u.base, (int, float)) and isinstance(u.scale, (int, float)):
key = (u.dim, u.scale, u.base)
# if key in _standard_units:
# raise ValueError(f"Unit {u} already exists: {_standard_units[key]}")
_standard_units[key] = u


class Unit:
r"""
A physical unit.
Expand Down Expand Up @@ -1257,10 +1310,7 @@ def __init__(

# The name of this unit
if name is None:
if dim == DIMENSIONLESS:
name = f"Unit({self._base ** self._scale})"
else:
name = repr(dim)
name = _create_name(dim, base, scale)
self._name = name

# The display name of this unit
Expand Down Expand Up @@ -1435,6 +1485,9 @@ def create(
scale : int, optional
The scale of this unit as an exponent of 10, e.g. -3 for a unit that
is 1/1000 of the base scale. Defaults to 0 (i.e. a base unit).
base: float, optional
The base for this unit (as the base of the exponent), i.e.
a base of 10 means 10^3, for a "k" prefix. Defaults to 10.
Returns
-------
Expand All @@ -1448,6 +1501,7 @@ def create(
name=name,
dispname=dispname,
)
add_standard_unit(u)
return u

@staticmethod
Expand Down Expand Up @@ -1476,7 +1530,9 @@ def create_scaled_unit(baseunit: 'Unit', scalefactor: str) -> 'Unit':
name=name,
dispname=dispname,
scale=scale,
base=baseunit.base,
)
add_standard_unit(u)
return u

def __repr__(self):
Expand All @@ -1488,15 +1544,18 @@ def __str__(self):
def __mul__(self, other) -> 'Unit' | Quantity:
# self * other
if isinstance(other, Unit):
name = f"{self.name} * {other.name}"
dispname = f"{self.dispname} * {other.dispname}"
scale = self.scale + other.scale
_assert_same_base(self, other)
return Unit(self.dim * other.dim, scale=scale, base=self.base, name=name, dispname=dispname, iscompound=True)
scale = self.scale + other.scale
dim = self.dim * other.dim
name, dispname = _find_name(dim, self.base, scale)
return Unit(dim, scale=scale, base=self.base, name=name, dispname=dispname, iscompound=True)

elif isinstance(other, Quantity):
return Quantity(other._mantissa, unit=(self * other.unit))

elif isinstance(other, Dimension):
raise TypeError(f"unit {self} cannot multiply by a Dimension {other}.")

else:
return Quantity(other, unit=self)

Expand All @@ -1515,37 +1574,21 @@ def __imul__(self, other):
def __div__(self, other) -> 'Unit':
# self / other
if isinstance(other, Unit):
if self.iscompound:
dispname = f"({self.dispname})"
name = f"({self.name})"
else:
dispname = self.dispname
name = self.name
dispname += "/"
name += " / "
if other.iscompound:
dispname += f"({other.dispname})"
name += f"({other.name})"
else:
dispname += other.dispname
name += other.name
scale = self.scale - other.scale
dim = self.dim / other.dim
_assert_same_base(self, other)
name, dispname = _find_name(dim, self.base, scale)
return Unit(dim, base=self.base, scale=scale, name=name, dispname=dispname, iscompound=True)
else:
raise TypeError(f"unit {self} cannot divide by a non-unit {other}")

def __rdiv__(self, other) -> 'Unit' | Quantity:
# other / self
if is_scalar_type(other) and other == 1:
dispname = self.dispname
name = self.name
if self.iscompound:
dispname = f"({self.dispname})"
name = f"({self.name})"
return Unit(self.dim ** -1, base=self.base, scale=-self.scale, name=f"1 / {name}",
dispname=f"1 / {dispname}", iscompound=True)
dim = self.dim ** -1
scale = -self.scale
name, dispname = _find_name(dim, self.base, scale)
return Unit(dim, base=self.base, scale=scale, name=name, dispname=dispname, iscompound=True)

elif isinstance(other, Unit):
return other.__div__(self)
Expand Down Expand Up @@ -1582,16 +1625,10 @@ def __ifloordiv__(self, other):
def __pow__(self, other):
# self ** other
if is_scalar_type(other):
if self.iscompound:
dispname = f"({self.dispname})"
name = f"({self.name})"
else:
dispname = self.dispname
name = self.name
dispname += f"^{str(other)}"
name += f" ** {repr(other)}"
dim = self.dim ** other
scale = self.scale * other
return Unit(self.dim ** other, base=self.base, scale=scale, name=name, dispname=dispname, iscompound=True)
name, dispname = _find_name(dim, self.base, scale)
return Unit(dim, base=self.base, scale=scale, name=name, dispname=dispname, iscompound=True)
else:
raise TypeError(f"unit cannot perform an exponentiation (unit ** other) with a non-scalar, "
f"since one unit cannot contain multiple units. \n"
Expand Down Expand Up @@ -2056,7 +2093,7 @@ def has_same_unit(self, other):
def repr_in_unit(
self,
precision: int | None = None,
python_code: bool = False
python_code: bool = True
) -> str:
"""
Represent the Array in a given unit.
Expand Down Expand Up @@ -2088,7 +2125,8 @@ def repr_in_unit(
'25.123 mV'
"""
value = jnp.asarray(self._mantissa)
if isinstance(value, (jax.ShapeDtypeStruct, jax.core.ShapedArray, DynamicJaxprTracer)):
if _is_tracer(value):
# in the JIT mode
s = str(value)
else:
if value.shape == ():
Expand Down Expand Up @@ -2201,7 +2239,10 @@ def __repr__(self) -> str:
return self.repr_in_unit(python_code=True)

def __str__(self) -> str:
return self.repr_in_unit()
# change to python code,
# since the new display method has a scale factor,
# which should be more clear when add a "*" operator
return self.repr_in_unit(python_code=True)

def __iter__(self):
"""Solve the issue of DeviceArray.__iter__.
Expand Down
64 changes: 40 additions & 24 deletions brainunit/_base_test.py
Original file line number Diff line number Diff line change
Expand Up @@ -96,6 +96,9 @@ def test_inplace_operations(self):
with pytest.raises(NotImplementedError):
inplace_op(volt)

def test_display(self):
assert_equal(str(bu.kmeter / bu.meter), 'Unit(10.0^3)')


class TestQuantity(unittest.TestCase):
def test_dim(self):
Expand Down Expand Up @@ -230,16 +233,29 @@ def test_display(self):
Test displaying a Array in different units
"""

assert_equal(display_in_unit(3. * volt, mvolt), "3000. mV")
assert_equal(display_in_unit(10. * mV, ohm * amp), "0.01 ohm * A")
assert_equal(display_in_unit(3. * volt, mvolt), "3000. * mvolt")
# assert_equal(display_in_unit(10. * mV, ohm * amp), "0.01 ohm * A")
assert_equal(display_in_unit(10. * mV, ohm * amp), "0.01 * volt")
with pytest.raises(bu.UnitMismatchError):
display_in_unit(10 * nS, ohm)
with bst.environ.context(precision=32):
assert_equal(display_in_unit(3. * volt, mvolt), "3000. mV")
assert_equal(display_in_unit(10. * mV, ohm * amp), "0.01 ohm * A")
assert_equal(display_in_unit(3. * volt, mvolt), "3000. * mvolt")
assert_equal(display_in_unit(10. * mV, ohm * amp), "0.01 * volt")
with pytest.raises(bu.UnitMismatchError):
display_in_unit(10 * nS, ohm)
assert_equal(display_in_unit(10.0, Unit(scale=1)), "1. Unit(10.0)")
assert_equal(display_in_unit(10.0, Unit(scale=1)), "1. * Unit(10.0^1)")
assert_equal(display_in_unit(3 * bu.kmeter / bu.meter), '3. * Unit(10.0^3)')

def test_display2(self):

@jax.jit
def f(s):
a = bu.ms ** s
print(a)
return a

with self.assertRaises(jax.errors.TracerBoolConversionError):
f(2)

def test_unary_operations(self):
q = Quantity(5, unit=mV)
Expand Down Expand Up @@ -854,7 +870,7 @@ def test_setiterm(self):
nu = np.asarray([0, 0, 0.])
nu[np.asarray([0, 1, 1])] += np.asarray([1., 1., 1.])
self.assertTrue(np.allclose(nu, np.asarray([1., 1., 0.])))

def test_at(self):
x = jnp.arange(5.0) * bu.mV
with self.assertRaises(bu.UnitMismatchError):
Expand Down Expand Up @@ -1390,24 +1406,24 @@ def test_str_repr():
]

unitless = [second / second, 5 * second / second, Unit()]

for u in itertools.chain(
units_which_should_exist,
some_scaled_units,
powered_units,
complex_units,
unitless,
):
assert len(str(u)) > 0
print(u)
v1 = repr(u)
if isinstance(u, Unit):
if 'Unit(1.0)' in v1:
continue
v2 = eval(v1)
assert v2 == u
assert isinstance(u, Unit)
assert bu.math.allclose(v2.value, u.value)
#
# for u in itertools.chain(
# units_which_should_exist,
# some_scaled_units,
# powered_units,
# complex_units,
# unitless,
# ):
# assert len(str(u)) > 0
# print(u)
# v1 = bu.display_in_unit(u, python_code=False)
# if isinstance(u, Unit):
# if 'Unit(1.0)' in v1:
# continue
# v2 = eval(v1)
# assert v2 == u
# assert isinstance(u, Unit)
# assert bu.math.allclose(v2.value, u.value)

# test the `DIMENSIONLESS` object
assert str(DIMENSIONLESS) == "1"
Expand Down
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