diff --git a/docs/source/installation.rst b/docs/source/installation.rst index 59c6be6..e530b45 100644 --- a/docs/source/installation.rst +++ b/docs/source/installation.rst @@ -53,3 +53,11 @@ Clone this repository and use pip to install an editable version: .. code-block:: bash pip install --editable . + + +Optionally, add the ``[dev,docs]`` extras to install the development and +documentation dependencies: + +.. code-block:: bash + + pip install --editable .[dev,docs] diff --git a/docs/source/prediction-models.rst b/docs/source/prediction-models.rst index 7e881a6..b0e4eff 100644 --- a/docs/source/prediction-models.rst +++ b/docs/source/prediction-models.rst @@ -81,7 +81,7 @@ Training new MS²PIP models [todo] -Prediciton features +Prediction features ------------------- The table below lists and describes all features generated and used by MS²PIP. These are mostly diff --git a/docs/source/usage.rst b/docs/source/usage.rst index e34b99f..13cd896 100644 --- a/docs/source/usage.rst +++ b/docs/source/usage.rst @@ -55,6 +55,11 @@ This mode was first developed in collaboration with the ProGenTomics group for t To train a new prediction model, see :ref:`Training new MS²PIP models`. +``annotate-spectra`` +--------------------- + +[todo] + Input =====