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This repository has been archived by the owner on Nov 21, 2024. It is now read-only.
Documentation says EDC is supported. Running the program says otherwise.
$ java -jar xilmass-1.0.jar -c
10:41:30,781 INFO Start:1468 - Successfully sent analytics event.
[Xilmass - an algorithm to identify cross-linked peptides]
10:41:30,831 INFO Start:116 - Xilmass version:1.0 starts!
10:41:30,861 INFO Start:1423 - There are currently 4 mass windows!
10:41:30,866 ERROR Start:322 - java.lang.UnsupportedOperationException: EDC cross-linker is not supported yet.
10:41:30,866 INFO Start:335 - The settings are ready to perform the search!
10:41:30,866 INFO Start:338 - Checking if a previously constructed CX database exists for the same search settings!
10:41:30,866 INFO Start:369 - Either a CX database is not found or the settings are different! A CX database is going to be constructed..
10:41:30,871 ERROR Start:768 - EDC cross-linker is not supported yet.
java.lang.UnsupportedOperationException: EDC cross-linker is not supported yet.
at crossLinker.type.EDC.<init>(EDC.java:26)
at crossLinker.GetCrossLinker.getCrossLinker(GetCrossLinker.java:23)
at database.CreateDatabase.<init>(CreateDatabase.java:101)
at start.Start.launchCommandLineMode(Start.java:370)
at start.Start.parse(Start.java:766)
at start.Start.main(Start.java:103)
usage: java -jar <jar file name> [-c | -r | -s] [-h] [-u]
Help
-c,--command_line Command-line mode
-h,--help Help
-r,--results_gui Results GUI mode
-s,--startup_gui Startup GUI mode
-u,--usage Usage
End of Help
The text was updated successfully, but these errors were encountered:
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Documentation says EDC is supported. Running the program says otherwise.
The text was updated successfully, but these errors were encountered: