diff --git a/Gemfile.lock b/Gemfile.lock index bb15f9be79..cc6e660d2f 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -135,7 +135,7 @@ GEM ansi (1.5.0) arel (6.0.4) ast (2.4.0) - autoprefixer-rails (9.7.1) + autoprefixer-rails (9.7.3) execjs base32-url (0.5) bcrypt (3.1.13) @@ -189,7 +189,7 @@ GEM bootstrap-sass (3.4.1) autoprefixer-rails (>= 5.2.1) sassc (>= 2.0.0) - builder (3.2.3) + builder (3.2.4) byebug (11.0.1) capistrano (3.11.2) airbrussh (>= 1.0.0) @@ -203,7 +203,7 @@ GEM capistrano-rails (1.4.0) capistrano (~> 3.1) capistrano-bundler (~> 1.1) - capybara (3.29.0) + capybara (3.30.0) addressable mini_mime (>= 0.1.3) nokogiri (~> 1.8) @@ -211,7 +211,7 @@ GEM rack-test (>= 0.6.3) regexp_parser (~> 1.5) xpath (~> 3.2) - capybara-screenshot (1.0.23) + capybara-screenshot (1.0.24) capybara (>= 1.0, < 4) launchy carrierwave (0.10.0) @@ -230,7 +230,7 @@ GEM maremma (>= 4.1, < 5) nokogiri (~> 1.8.1) thor (~> 0.19) - citeproc (1.0.9) + citeproc (1.0.10) namae (~> 1.0) citeproc-ruby (1.1.10) citeproc (~> 1.0, >= 1.0.9) @@ -249,17 +249,16 @@ GEM coffee-script-source (1.12.2) colorize (0.8.1) concurrent-ruby (1.1.5) - config (2.0.0) - activesupport (>= 4.2) + config (2.2.1) deep_merge (~> 1.2, >= 1.2.1) - dry-schema (~> 1.0) + dry-validation (~> 1.0, >= 1.0.0) connection_pool (2.2.2) crack (0.4.3) safe_yaml (~> 1.0.0) crass (1.0.5) - csl (1.5.0) + csl (1.5.1) namae (~> 1.0) - csl-styles (1.0.1.9) + csl-styles (1.0.1.10) csl (~> 1.0) database_cleaner (1.7.0) datacite-mapping (0.4.0) @@ -285,7 +284,7 @@ GEM doorkeeper (5.0.2) railties (>= 4.2) dotenv (2.7.5) - down (5.0.0) + down (5.1.0) addressable (~> 2.5) dry-configurable (0.9.0) concurrent-ruby (~> 1.0) @@ -297,12 +296,12 @@ GEM concurrent-ruby (~> 1.0) dry-equalizer (0.3.0) dry-inflector (0.2.0) - dry-initializer (3.0.2) + dry-initializer (3.0.3) dry-logic (1.0.5) concurrent-ruby (~> 1.0) dry-core (~> 0.2) dry-equalizer (~> 0.2) - dry-schema (1.4.1) + dry-schema (1.4.3) concurrent-ruby (~> 1.0) dry-configurable (~> 0.8, >= 0.8.3) dry-core (~> 0.4) @@ -310,16 +309,23 @@ GEM dry-initializer (~> 3.0) dry-logic (~> 1.0) dry-types (~> 1.2) - dry-types (1.2.1) + dry-types (1.2.2) concurrent-ruby (~> 1.0) dry-container (~> 0.3) dry-core (~> 0.4, >= 0.4.4) - dry-equalizer (~> 0.2, >= 0.2.2) + dry-equalizer (~> 0.3) dry-inflector (~> 0.1, >= 0.1.2) dry-logic (~> 1.0, >= 1.0.2) - ebnf (1.1.3) - rdf (~> 3.0) - sxp (~> 1.0) + dry-validation (1.4.1) + concurrent-ruby (~> 1.0) + dry-container (~> 0.7, >= 0.7.1) + dry-core (~> 0.4) + dry-equalizer (~> 0.2) + dry-initializer (~> 3.0) + dry-schema (~> 1.0, >= 1.4.3) + ebnf (1.2.0) + rdf (~> 3.1) + sxp (~> 1.1) edtf (3.0.5) activesupport (>= 3.0, < 7.0) equivalent-xml (0.6.0) @@ -346,7 +352,7 @@ GEM faraday faraday_middleware (0.12.2) faraday (>= 0.7.4, < 1.0) - ffi (1.11.2) + ffi (1.11.3) ffi-compiler (1.0.1) ffi (>= 1.0.0) rake @@ -394,18 +400,18 @@ GEM hashdiff (1.0.0) hashie (3.6.0) htmlentities (4.3.4) - http (4.2.0) + http (4.3.0) addressable (~> 2.3) http-cookie (~> 1.0) - http-form_data (~> 2.0) + http-form_data (~> 2.2) http-parser (~> 1.2.0) http-accept (1.7.0) http-cookie (1.0.3) domain_name (~> 0.5) - http-form_data (2.1.1) + http-form_data (2.2.0) http-parser (1.2.1) ffi-compiler (>= 1.0, < 2.0) - httparty (0.17.1) + httparty (0.17.3) mime-types (~> 3.0) multi_xml (>= 0.5.2) httpclient (2.8.3) @@ -428,7 +434,7 @@ GEM turbolinks jquery-ui-rails (6.0.1) railties (>= 3.2.16) - json (2.2.0) + json (2.3.0) json-ld (2.2.1) multi_json (~> 1.12) rdf (>= 2.2.8, < 4.0) @@ -454,13 +460,13 @@ GEM leaflet-rails (0.7.7) libv8 (3.16.14.19) link_header (0.0.8) - listen (3.2.0) + listen (3.2.1) rb-fsevent (~> 0.10, >= 0.10.3) rb-inotify (~> 0.9, >= 0.9.10) - loofah (2.3.1) + loofah (2.4.0) crass (~> 1.0.2) nokogiri (>= 1.5.9) - lumberjack (1.0.13) + lumberjack (1.1.1) mail (2.7.1) mini_mime (>= 0.1.1) maremma (4.2.6) @@ -477,9 +483,8 @@ GEM merritt-manifest (0.1.3) mime-types (~> 3.1) typesafe_enum (~> 0.1.7) - metaclass (0.0.4) method_source (0.9.2) - mime-types (3.3) + mime-types (3.3.1) mime-types-data (~> 3.2015) mime-types-data (3.2019.1009) mini_mime (1.0.2) @@ -487,8 +492,7 @@ GEM minitest (5.13.0) mize (0.4.0) protocol (~> 2.0) - mocha (1.9.0) - metaclass (~> 0.0.1) + mocha (1.11.2) multi_json (1.14.1) multi_xml (0.6.0) multipart-post (2.1.1) @@ -534,8 +538,8 @@ GEM omniauth (>= 1.0.0) orm_adapter (0.5.0) pandoc-ruby (2.0.2) - parallel (1.19.0) - parser (2.6.5.0) + parallel (1.19.1) + parser (2.7.0.2) ast (~> 2.4.0) passenger (6.0.4) rack @@ -557,7 +561,7 @@ GEM pry (~> 0.9) slop (~> 3.0) public_suffix (2.0.5) - rack (1.6.11) + rack (1.6.12) rack-test (0.6.3) rack (>= 1.0) rails (4.2.11) @@ -587,20 +591,20 @@ GEM rainbow (3.0.0) rake (13.0.1) rb-fsevent (0.10.3) - rb-inotify (0.10.0) + rb-inotify (0.10.1) ffi (~> 1.0) rb-readline (0.5.5) - rdf (3.0.13) + rdf (3.1.1) hamster (~> 3.0) link_header (~> 0.0, >= 0.0.8) - rdf-aggregate-repo (2.2.1) - rdf (>= 2.2, < 4.0) - rdf-rdfa (3.0.1) - haml (~> 5.0) + rdf-aggregate-repo (3.1.0) + rdf (~> 3.1) + rdf-rdfa (3.1.0) + haml (~> 5.1) htmlentities (~> 4.3) - rdf (~> 3.0) - rdf-aggregate-repo (>= 2.2, < 4.0) - rdf-xsd (~> 3.0) + rdf (~> 3.1) + rdf-aggregate-repo (~> 3.1) + rdf-xsd (~> 3.1) rdf-rdfxml (2.2.1) htmlentities (~> 4.3) rdf (>= 2.2, < 4.0) @@ -609,8 +613,8 @@ GEM rdf-turtle (2.2.2) ebnf (~> 1.1) rdf (>= 2.2, < 4.0) - rdf-xsd (3.0.1) - rdf (~> 3.0) + rdf-xsd (3.1.0) + rdf (~> 3.1) redcarpet (3.5.0) ref (2.0.0) regexp_parser (1.6.0) @@ -633,12 +637,12 @@ GEM rspec-mocks (~> 3.9.0) rspec-collection_matchers (1.2.0) rspec-expectations (>= 2.99.0.beta1) - rspec-core (3.9.0) - rspec-support (~> 3.9.0) + rspec-core (3.9.1) + rspec-support (~> 3.9.1) rspec-expectations (3.9.0) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) - rspec-mocks (3.9.0) + rspec-mocks (3.9.1) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) rspec-rails (3.9.0) @@ -649,7 +653,7 @@ GEM rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) rspec-support (~> 3.9.0) - rspec-support (3.9.0) + rspec-support (3.9.2) rubocop (0.57.2) jaro_winkler (~> 1.5.1) parallel (~> 1.10) @@ -677,7 +681,7 @@ GEM tilt (>= 1.1, < 3) sassc (2.2.1) ffi (~> 1.9) - selenium-webdriver (3.142.6) + selenium-webdriver (3.142.7) childprocess (>= 0.5, < 4.0) rubyzip (>= 1.2.2) serrano (0.5.0) @@ -727,8 +731,9 @@ GEM stripe (4.16.0) faraday (~> 0.13) net-http-persistent (~> 3.0) - sxp (1.0.2) - rdf (~> 3.0) + sxp (1.1.0) + rdf (~> 3.1) + sync (0.5.0) temple (0.8.2) terminal-table (1.8.0) unicode-display_width (~> 1.1, >= 1.1.1) @@ -740,8 +745,9 @@ GEM thor (0.20.3) thread_safe (0.3.6) tilt (2.0.10) - tins (1.22.2) - trollop (2.9.9) + tins (1.24.0) + sync + trollop (2.9.10) turbolinks (5.2.1) turbolinks-source (~> 5.2) turbolinks-source (5.2.0) @@ -750,7 +756,7 @@ GEM jquery-rails railties (>= 3.1) typesafe_enum (0.1.9) - tzinfo (1.2.5) + tzinfo (1.2.6) thread_safe (~> 0.1) uglifier (3.0.4) execjs (>= 0.3.0, < 3) @@ -766,7 +772,7 @@ GEM binding_of_caller (>= 0.7.2) railties (>= 4.0) sprockets-rails (>= 2.0, < 4.0) - webdrivers (4.1.3) + webdrivers (4.2.0) nokogiri (~> 1.6) rubyzip (>= 1.3.0) selenium-webdriver (>= 3.0, < 4.0) diff --git a/stash/script/counter-uploader/Gemfile.lock b/stash/script/counter-uploader/Gemfile.lock index 23f0ec9a27..57dec3dd57 100644 --- a/stash/script/counter-uploader/Gemfile.lock +++ b/stash/script/counter-uploader/Gemfile.lock @@ -32,7 +32,8 @@ GEM faraday-encoding (~> 0.0.1) faraday_middleware (~> 0.10.0) multi_json (~> 1.12) - nokogiri (~> 1.6, >= 1.6.8) + nokogiri (>= 1.10.7) + nokogiri (>= 1.10.7) oj (>= 2.8.3) mime-types (3.2.2) mime-types-data (~> 3.2015) @@ -42,7 +43,7 @@ GEM multi_json (1.13.1) multi_xml (0.6.0) multipart-post (2.1.1) - nokogiri (1.10.3) + nokogiri (1.10.7) mini_portile2 (~> 2.4.0) oj (3.7.11) public_suffix (3.1.1) diff --git a/stash/stash-notifier/Gemfile.lock b/stash/stash-notifier/Gemfile.lock index cec688a295..43c2a29417 100644 --- a/stash/stash-notifier/Gemfile.lock +++ b/stash/stash-notifier/Gemfile.lock @@ -7,11 +7,11 @@ GEM thread_safe (~> 0.3, >= 0.3.4) tzinfo (~> 1.1) ast (2.4.0) - builder (3.2.3) + builder (3.2.4) byebug (11.0.1) concurrent-ruby (1.1.5) diff-lcs (1.3) - faraday (0.17.0) + faraday (0.17.3) multipart-post (>= 1.2, < 3) faraday_middleware (0.13.1) faraday (>= 0.7.4, < 1.0) @@ -22,14 +22,14 @@ GEM mini_portile2 (2.4.0) minitest (5.13.0) multipart-post (2.1.1) - nokogiri (1.10.5) + nokogiri (1.10.7) mini_portile2 (~> 2.4.0) oai (1.0.0) builder (>= 3.1.0) faraday faraday_middleware - parallel (1.19.0) - parser (2.6.5.0) + parallel (1.19.1) + parser (2.7.0.2) ast (~> 2.4.0) powerpack (0.1.2) rainbow (3.0.0) @@ -38,15 +38,15 @@ GEM rspec-core (~> 3.9.0) rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) - rspec-core (3.9.0) - rspec-support (~> 3.9.0) + rspec-core (3.9.1) + rspec-support (~> 3.9.1) rspec-expectations (3.9.0) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) - rspec-mocks (3.9.0) + rspec-mocks (3.9.1) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) - rspec-support (3.9.0) + rspec-support (3.9.2) rubocop (0.57.2) jaro_winkler (~> 1.5.1) parallel (~> 1.10) @@ -57,7 +57,7 @@ GEM unicode-display_width (~> 1.0, >= 1.0.1) ruby-progressbar (1.10.1) thread_safe (0.3.6) - tzinfo (1.2.5) + tzinfo (1.2.6) thread_safe (~> 0.1) unicode-display_width (1.6.0) diff --git a/stash/stash_api/Gemfile b/stash/stash_api/Gemfile index 42fb7a2d95..57b8ce25f5 100644 --- a/stash/stash_api/Gemfile +++ b/stash/stash_api/Gemfile @@ -15,9 +15,6 @@ gemspec gem 'doorkeeper' gem 'mysql2', '< 0.5' -# To use a debugger -# gem 'byebug', group: [:development, :test] - path '..' do gem 'stash_datacite' gem 'stash_engine' diff --git a/stash/stash_api/Gemfile.lock b/stash/stash_api/Gemfile.lock index 959436780f..ef2b7942c7 100644 --- a/stash/stash_api/Gemfile.lock +++ b/stash/stash_api/Gemfile.lock @@ -123,7 +123,7 @@ GEM activerecord (>= 3.2.6) arel (6.0.4) ast (2.4.0) - autoprefixer-rails (9.7.1) + autoprefixer-rails (9.7.3) execjs base32-url (0.5) bcrypt (3.1.13) @@ -175,7 +175,7 @@ GEM bootstrap-sass (3.4.1) autoprefixer-rails (>= 5.2.1) sassc (>= 2.0.0) - builder (3.2.3) + builder (3.2.4) byebug (11.0.1) carrierwave (0.10.0) activemodel (>= 3.2.0) @@ -192,7 +192,7 @@ GEM maremma (>= 4.1, < 5) nokogiri (~> 1.8.1) thor (~> 0.19) - citeproc (1.0.9) + citeproc (1.0.10) namae (~> 1.0) citeproc-ruby (1.1.10) citeproc (~> 1.0, >= 1.0.9) @@ -208,15 +208,14 @@ GEM railties (>= 3.0.0) thor (>= 0.14.6) concurrent-ruby (1.1.5) - config (2.0.0) - activesupport (>= 4.2) + config (2.2.1) deep_merge (~> 1.2, >= 1.2.1) - dry-schema (~> 1.0) + dry-validation (~> 1.0, >= 1.0.0) connection_pool (2.2.2) crass (1.0.5) - csl (1.5.0) + csl (1.5.1) namae (~> 1.0) - csl-styles (1.0.1.9) + csl-styles (1.0.1.10) csl (~> 1.0) database_cleaner (1.7.0) datacite-mapping (0.4.0) @@ -250,12 +249,12 @@ GEM concurrent-ruby (~> 1.0) dry-equalizer (0.3.0) dry-inflector (0.2.0) - dry-initializer (3.0.2) + dry-initializer (3.0.3) dry-logic (1.0.5) concurrent-ruby (~> 1.0) dry-core (~> 0.2) dry-equalizer (~> 0.2) - dry-schema (1.4.1) + dry-schema (1.4.3) concurrent-ruby (~> 1.0) dry-configurable (~> 0.8, >= 0.8.3) dry-core (~> 0.4) @@ -263,20 +262,27 @@ GEM dry-initializer (~> 3.0) dry-logic (~> 1.0) dry-types (~> 1.2) - dry-types (1.2.1) + dry-types (1.2.2) concurrent-ruby (~> 1.0) dry-container (~> 0.3) dry-core (~> 0.4, >= 0.4.4) - dry-equalizer (~> 0.2, >= 0.2.2) + dry-equalizer (~> 0.3) dry-inflector (~> 0.1, >= 0.1.2) dry-logic (~> 1.0, >= 1.0.2) - ebnf (1.1.3) - rdf (~> 3.0) - sxp (~> 1.0) + dry-validation (1.4.1) + concurrent-ruby (~> 1.0) + dry-container (~> 0.7, >= 0.7.1) + dry-core (~> 0.4) + dry-equalizer (~> 0.2) + dry-initializer (~> 3.0) + dry-schema (~> 1.0, >= 1.4.3) + ebnf (1.2.0) + rdf (~> 3.1) + sxp (~> 1.1) edtf (3.0.5) activesupport (>= 3.0, < 7.0) erubis (2.7.0) - excon (0.68.0) + excon (0.71.1) execjs (2.7.0) ezid-client (1.8.0) hashie (~> 3.4, >= 3.4.3) @@ -286,13 +292,13 @@ GEM factory_bot_rails (5.1.1) factory_bot (~> 5.1.0) railties (>= 4.2.0) - faraday (0.15.4) + faraday (0.17.3) multipart-post (>= 1.2, < 3) faraday-encoding (0.0.5) faraday faraday_middleware (0.12.2) faraday (>= 0.7.4, < 1.0) - ffi (1.11.2) + ffi (1.11.3) ffi-compiler (1.0.1) ffi (>= 1.0.0) rake @@ -321,18 +327,18 @@ GEM concurrent-ruby (~> 1.0) hashie (3.6.0) htmlentities (4.3.4) - http (4.2.0) + http (4.3.0) addressable (~> 2.3) http-cookie (~> 1.0) - http-form_data (~> 2.0) + http-form_data (~> 2.2) http-parser (~> 1.2.0) http-accept (1.7.0) http-cookie (1.0.3) domain_name (~> 0.5) - http-form_data (2.1.1) + http-form_data (2.2.0) http-parser (1.2.1) ffi-compiler (>= 1.0, < 2.0) - httparty (0.17.1) + httparty (0.17.3) mime-types (~> 3.0) multi_xml (>= 0.5.2) httpclient (2.8.3) @@ -355,7 +361,7 @@ GEM turbolinks jquery-ui-rails (6.0.1) railties (>= 3.2.16) - json (2.2.0) + json (2.3.0) json-ld (2.2.1) multi_json (~> 1.12) rdf (>= 2.2.8, < 4.0) @@ -378,7 +384,7 @@ GEM latex-decode (0.3.1) leaflet-rails (0.7.7) link_header (0.0.8) - loofah (2.3.1) + loofah (2.4.0) crass (~> 1.0.2) nokogiri (>= 1.5.9) mail (2.7.1) @@ -394,7 +400,7 @@ GEM multi_json (~> 1.12) nokogiri (~> 1.8.1) oj (>= 2.8.3) - mime-types (3.3) + mime-types (3.3.1) mime-types-data (~> 3.2015) mime-types-data (3.2019.1009) mini_mime (1.0.2) @@ -436,8 +442,8 @@ GEM omniauth (>= 1.0.0) orm_adapter (0.5.0) pandoc-ruby (2.0.2) - parallel (1.19.0) - parser (2.6.5.0) + parallel (1.19.1) + parser (2.7.0.2) ast (~> 2.4.0) posix-spawn (0.3.13) postrank-uri (1.0.24) @@ -448,7 +454,7 @@ GEM protocol (2.0.0) ruby_parser (~> 3.0) public_suffix (2.0.5) - rack (1.6.11) + rack (1.6.12) rack-test (0.6.3) rack (>= 1.0) rails (4.2.11.1) @@ -477,17 +483,17 @@ GEM thor (>= 0.18.1, < 2.0) rainbow (3.0.0) rake (13.0.1) - rdf (3.0.13) + rdf (3.1.1) hamster (~> 3.0) link_header (~> 0.0, >= 0.0.8) - rdf-aggregate-repo (2.2.1) - rdf (>= 2.2, < 4.0) - rdf-rdfa (3.0.1) - haml (~> 5.0) + rdf-aggregate-repo (3.1.0) + rdf (~> 3.1) + rdf-rdfa (3.1.0) + haml (~> 5.1) htmlentities (~> 4.3) - rdf (~> 3.0) - rdf-aggregate-repo (>= 2.2, < 4.0) - rdf-xsd (~> 3.0) + rdf (~> 3.1) + rdf-aggregate-repo (~> 3.1) + rdf-xsd (~> 3.1) rdf-rdfxml (2.2.1) htmlentities (~> 4.3) rdf (>= 2.2, < 4.0) @@ -496,8 +502,8 @@ GEM rdf-turtle (2.2.2) ebnf (~> 1.1) rdf (>= 2.2, < 4.0) - rdf-xsd (3.0.1) - rdf (~> 3.0) + rdf-xsd (3.1.0) + rdf (~> 3.1) redcarpet (3.5.0) responders (2.4.1) actionpack (>= 4.2.0, < 6.0) @@ -516,12 +522,12 @@ GEM rspec-core (~> 3.9.0) rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) - rspec-core (3.9.0) - rspec-support (~> 3.9.0) + rspec-core (3.9.1) + rspec-support (~> 3.9.1) rspec-expectations (3.9.0) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) - rspec-mocks (3.9.0) + rspec-mocks (3.9.1) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) rspec-rails (3.9.0) @@ -532,7 +538,7 @@ GEM rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) rspec-support (~> 3.9.0) - rspec-support (3.9.0) + rspec-support (3.9.2) rubocop (0.57.2) jaro_winkler (~> 1.5.1) parallel (~> 1.10) @@ -557,8 +563,8 @@ GEM sprockets (> 3.0) sprockets-rails tilt - serrano (0.5.2) - faraday (~> 0.15.0) + serrano (0.5.4) + faraday (>= 0.15, < 0.18) faraday_middleware (>= 0.12.2, < 0.14.0) multi_json (~> 1.13, >= 1.13.1) thor (~> 0.20.0) @@ -581,16 +587,18 @@ GEM stripe (4.16.0) faraday (~> 0.13) net-http-persistent (~> 3.0) - sxp (1.0.2) - rdf (~> 3.0) + sxp (1.1.0) + rdf (~> 3.1) + sync (0.5.0) temple (0.8.2) terrapin (0.6.0) climate_control (>= 0.0.3, < 1.0) thor (0.20.3) thread_safe (0.3.6) tilt (2.0.10) - tins (1.22.2) - trollop (2.9.9) + tins (1.24.0) + sync + trollop (2.9.10) turbolinks (5.2.1) turbolinks-source (~> 5.2) turbolinks-source (5.2.0) @@ -599,7 +607,7 @@ GEM jquery-rails railties (>= 3.1) typesafe_enum (0.1.9) - tzinfo (1.2.5) + tzinfo (1.2.6) thread_safe (~> 0.1) unf (0.1.4) unf_ext diff --git a/stash/stash_api/stash_api.gemspec b/stash/stash_api/stash_api.gemspec index f99f8bbecc..71e06259dc 100644 --- a/stash/stash_api/stash_api.gemspec +++ b/stash/stash_api/stash_api.gemspec @@ -23,7 +23,6 @@ $LOAD_PATH.push ::File.expand_path('lib', __dir__) require 'stash_api/version' # Describe your gem and declare its dependencies: -# rubocop:disable Metrics/BlockLength Gem::Specification.new do |s| s.name = 'stash_api' s.version = StashApi::VERSION @@ -48,13 +47,11 @@ Gem::Specification.new do |s| s.add_dependency 'doorkeeper', '>= 4.4.2' s.add_dependency 'mysql2' s.add_dependency 'rails', '~> 4.2' - s.add_development_dependency 'byebug' + s.add_development_dependency 'colorize', '>= 0.8' - s.add_development_dependency 'combustion' s.add_development_dependency 'database_cleaner', '>= 1.5' s.add_development_dependency 'diffy', '>= 3.1' s.add_development_dependency 'rubocop', '~> 0.57.2' s.add_dependency 'stash_datacite' s.add_dependency 'stash_engine' end -# rubocop:enable Metrics/BlockLength diff --git a/stash/stash_datacite/Gemfile.lock b/stash/stash_datacite/Gemfile.lock index 2c05640505..2f879efec9 100644 --- a/stash/stash_datacite/Gemfile.lock +++ b/stash/stash_datacite/Gemfile.lock @@ -122,7 +122,7 @@ GEM ansi (1.5.0) arel (6.0.4) ast (2.4.0) - autoprefixer-rails (9.7.1) + autoprefixer-rails (9.7.3) execjs base32-url (0.5) bcrypt (3.1.13) @@ -174,7 +174,7 @@ GEM bootstrap-sass (3.4.1) autoprefixer-rails (>= 5.2.1) sassc (>= 2.0.0) - builder (3.2.3) + builder (3.2.4) byebug (11.0.1) carrierwave (0.10.0) activemodel (>= 3.2.0) @@ -191,7 +191,7 @@ GEM maremma (>= 4.1, < 5) nokogiri (~> 1.8.1) thor (~> 0.19) - citeproc (1.0.9) + citeproc (1.0.10) namae (~> 1.0) citeproc-ruby (1.1.10) citeproc (~> 1.0, >= 1.0.9) @@ -203,17 +203,16 @@ GEM coderay (1.1.2) colorize (0.8.1) concurrent-ruby (1.1.5) - config (2.0.0) - activesupport (>= 4.2) + config (2.2.1) deep_merge (~> 1.2, >= 1.2.1) - dry-schema (~> 1.0) + dry-validation (~> 1.0, >= 1.0.0) connection_pool (2.2.2) crack (0.4.3) safe_yaml (~> 1.0.0) crass (1.0.5) - csl (1.5.0) + csl (1.5.1) namae (~> 1.0) - csl-styles (1.0.1.9) + csl-styles (1.0.1.10) csl (~> 1.0) database_cleaner (1.7.0) datacite-mapping (0.4.0) @@ -246,12 +245,12 @@ GEM concurrent-ruby (~> 1.0) dry-equalizer (0.3.0) dry-inflector (0.2.0) - dry-initializer (3.0.2) + dry-initializer (3.0.3) dry-logic (1.0.5) concurrent-ruby (~> 1.0) dry-core (~> 0.2) dry-equalizer (~> 0.2) - dry-schema (1.4.1) + dry-schema (1.4.3) concurrent-ruby (~> 1.0) dry-configurable (~> 0.8, >= 0.8.3) dry-core (~> 0.4) @@ -259,22 +258,29 @@ GEM dry-initializer (~> 3.0) dry-logic (~> 1.0) dry-types (~> 1.2) - dry-types (1.2.1) + dry-types (1.2.2) concurrent-ruby (~> 1.0) dry-container (~> 0.3) dry-core (~> 0.4, >= 0.4.4) - dry-equalizer (~> 0.2, >= 0.2.2) + dry-equalizer (~> 0.3) dry-inflector (~> 0.1, >= 0.1.2) dry-logic (~> 1.0, >= 1.0.2) - ebnf (1.1.3) - rdf (~> 3.0) - sxp (~> 1.0) + dry-validation (1.4.1) + concurrent-ruby (~> 1.0) + dry-container (~> 0.7, >= 0.7.1) + dry-core (~> 0.4) + dry-equalizer (~> 0.2) + dry-initializer (~> 3.0) + dry-schema (~> 1.0, >= 1.4.3) + ebnf (1.2.0) + rdf (~> 3.1) + sxp (~> 1.1) edtf (3.0.5) activesupport (>= 3.0, < 7.0) equivalent-xml (0.6.0) nokogiri (>= 1.4.3) erubis (2.7.0) - excon (0.68.0) + excon (0.71.1) execjs (2.7.0) ezid-client (1.8.0) hashie (~> 3.4, >= 3.4.3) @@ -284,13 +290,13 @@ GEM factory_bot_rails (5.1.1) factory_bot (~> 5.1.0) railties (>= 4.2.0) - faraday (0.15.4) + faraday (0.17.3) multipart-post (>= 1.2, < 3) faraday-encoding (0.0.5) faraday faraday_middleware (0.12.2) faraday (>= 0.7.4, < 1.0) - ffi (1.11.2) + ffi (1.11.3) ffi-compiler (1.0.1) ffi (>= 1.0.0) rake @@ -320,18 +326,18 @@ GEM hashdiff (1.0.0) hashie (3.6.0) htmlentities (4.3.4) - http (4.2.0) + http (4.3.0) addressable (~> 2.3) http-cookie (~> 1.0) - http-form_data (~> 2.0) + http-form_data (~> 2.2) http-parser (~> 1.2.0) http-accept (1.7.0) http-cookie (1.0.3) domain_name (~> 0.5) - http-form_data (2.1.1) + http-form_data (2.2.0) http-parser (1.2.1) ffi-compiler (>= 1.0, < 2.0) - httparty (0.17.1) + httparty (0.17.3) mime-types (~> 3.0) multi_xml (>= 0.5.2) httpclient (2.8.3) @@ -354,7 +360,7 @@ GEM turbolinks jquery-ui-rails (6.0.1) railties (>= 3.2.16) - json (2.2.0) + json (2.3.0) json-ld (2.2.1) multi_json (~> 1.12) rdf (>= 2.2.8, < 4.0) @@ -377,7 +383,7 @@ GEM latex-decode (0.3.1) leaflet-rails (0.7.7) link_header (0.0.8) - loofah (2.3.1) + loofah (2.4.0) crass (~> 1.0.2) nokogiri (>= 1.5.9) mail (2.7.1) @@ -393,7 +399,7 @@ GEM multi_json (~> 1.12) nokogiri (~> 1.8.1) oj (>= 2.8.3) - mime-types (3.3) + mime-types (3.3.1) mime-types-data (~> 3.2015) mime-types-data (3.2019.1009) mini_mime (1.0.2) @@ -435,10 +441,10 @@ GEM omniauth (>= 1.0.0) orm_adapter (0.5.0) pandoc-ruby (2.0.2) - parallel (1.19.0) - parallel_tests (2.29.2) + parallel (1.19.1) + parallel_tests (2.30.0) parallel - parser (2.6.5.0) + parser (2.7.0.2) ast (~> 2.4.0) posix-spawn (0.3.13) postrank-uri (1.0.24) @@ -449,7 +455,7 @@ GEM protocol (2.0.0) ruby_parser (~> 3.0) public_suffix (2.0.5) - rack (1.6.11) + rack (1.6.12) rack-test (0.6.3) rack (>= 1.0) rails (4.2.11.1) @@ -479,19 +485,19 @@ GEM rainbow (3.0.0) rake (13.0.1) rb-fsevent (0.10.3) - rb-inotify (0.10.0) + rb-inotify (0.10.1) ffi (~> 1.0) - rdf (3.0.13) + rdf (3.1.1) hamster (~> 3.0) link_header (~> 0.0, >= 0.0.8) - rdf-aggregate-repo (2.2.1) - rdf (>= 2.2, < 4.0) - rdf-rdfa (3.0.1) - haml (~> 5.0) + rdf-aggregate-repo (3.1.0) + rdf (~> 3.1) + rdf-rdfa (3.1.0) + haml (~> 5.1) htmlentities (~> 4.3) - rdf (~> 3.0) - rdf-aggregate-repo (>= 2.2, < 4.0) - rdf-xsd (~> 3.0) + rdf (~> 3.1) + rdf-aggregate-repo (~> 3.1) + rdf-xsd (~> 3.1) rdf-rdfxml (2.2.1) htmlentities (~> 4.3) rdf (>= 2.2, < 4.0) @@ -500,8 +506,8 @@ GEM rdf-turtle (2.2.2) ebnf (~> 1.1) rdf (>= 2.2, < 4.0) - rdf-xsd (3.0.1) - rdf (~> 3.0) + rdf-xsd (3.1.0) + rdf (~> 3.1) redcarpet (3.5.0) responders (2.4.1) actionpack (>= 4.2.0, < 6.0) @@ -513,18 +519,19 @@ GEM netrc (~> 0.8) retriable (3.1.2) rinku (2.0.6) - rsolr (1.1.2) + rsolr (2.2.1) builder (>= 2.1.2) + faraday (>= 0.9.0) rspec (3.9.0) rspec-core (~> 3.9.0) rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) - rspec-core (3.9.0) - rspec-support (~> 3.9.0) + rspec-core (3.9.1) + rspec-support (~> 3.9.1) rspec-expectations (3.9.0) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) - rspec-mocks (3.9.0) + rspec-mocks (3.9.1) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) rspec-rails (3.9.0) @@ -535,7 +542,7 @@ GEM rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) rspec-support (~> 3.9.0) - rspec-support (3.9.0) + rspec-support (3.9.2) rubocop (0.57.2) jaro_winkler (~> 1.5.1) parallel (~> 1.10) @@ -567,8 +574,8 @@ GEM tilt scss_lint (0.59.0) sass (~> 3.5, >= 3.5.5) - serrano (0.5.2) - faraday (~> 0.15.0) + serrano (0.5.4) + faraday (>= 0.15, < 0.18) faraday_middleware (>= 0.12.2, < 0.14.0) multi_json (~> 1.13, >= 1.13.1) thor (~> 0.20.0) @@ -600,8 +607,9 @@ GEM stripe (4.16.0) faraday (~> 0.13) net-http-persistent (~> 3.0) - sxp (1.0.2) - rdf (~> 3.0) + sxp (1.1.0) + rdf (~> 3.1) + sync (0.5.0) temple (0.8.2) terminal-table (1.8.0) unicode-display_width (~> 1.1, >= 1.1.1) @@ -610,8 +618,9 @@ GEM thor (0.20.3) thread_safe (0.3.6) tilt (2.0.10) - tins (1.22.2) - trollop (2.9.9) + tins (1.24.0) + sync + trollop (2.9.10) turbolinks (5.2.1) turbolinks-source (~> 5.2) turbolinks-source (5.2.0) @@ -620,7 +629,7 @@ GEM jquery-rails railties (>= 3.1) typesafe_enum (0.1.9) - tzinfo (1.2.5) + tzinfo (1.2.6) thread_safe (~> 0.1) unf (0.1.4) unf_ext diff --git a/stash/stash_datacite/stash_datacite.gemspec b/stash/stash_datacite/stash_datacite.gemspec index 612a46b23a..5e8d45049a 100644 --- a/stash/stash_datacite/stash_datacite.gemspec +++ b/stash/stash_datacite/stash_datacite.gemspec @@ -52,7 +52,6 @@ Gem::Specification.new do |s| # rubocop:disable Metrics/BlockLength s.add_dependency 'stash_discovery' s.add_dependency 'stash_engine' - s.add_development_dependency 'byebug' s.add_development_dependency 'colorize', '>= 0.8' s.add_development_dependency 'database_cleaner', '>= 1.5' s.add_development_dependency 'diffy', '>= 3.1' diff --git a/stash/stash_discovery/stash_discovery.gemspec b/stash/stash_discovery/stash_discovery.gemspec index ea1f73d716..ef05a1d22d 100644 --- a/stash/stash_discovery/stash_discovery.gemspec +++ b/stash/stash_discovery/stash_discovery.gemspec @@ -55,5 +55,4 @@ Gem::Specification.new do |s| # rubocop:disable Metrics/BlockLength s.add_development_dependency 'rubocop', '~> 0.57.2' s.add_development_dependency 'simplecov', '>= 0.14' s.add_development_dependency 'simplecov-console', '>= 0.4' - s.add_development_dependency 'sqlite3' end diff --git a/stash/stash_engine/Gemfile.lock b/stash/stash_engine/Gemfile.lock index 23bc15494f..39206b0e15 100644 --- a/stash/stash_engine/Gemfile.lock +++ b/stash/stash_engine/Gemfile.lock @@ -126,7 +126,7 @@ GEM rdf-rdfxml (~> 2.0) rdf-turtle (~> 2.2) thor (~> 0.19) - builder (3.2.3) + builder (3.2.4) byebug (11.0.1) carrierwave (0.10.0) activemodel (>= 3.2.0) @@ -144,7 +144,7 @@ GEM maremma (>= 4.1, < 5) nokogiri (~> 1.8.1) thor (~> 0.19) - citeproc (1.0.9) + citeproc (1.0.10) namae (~> 1.0) citeproc-ruby (1.1.10) citeproc (~> 1.0, >= 1.0.9) @@ -159,9 +159,9 @@ GEM crack (0.4.3) safe_yaml (~> 1.0.0) crass (1.0.5) - csl (1.5.0) + csl (1.5.1) namae (~> 1.0) - csl-styles (1.0.1.9) + csl-styles (1.0.1.10) csl (~> 1.0) database_cleaner (1.7.0) datacite-mapping (0.4.0) @@ -173,15 +173,15 @@ GEM domain_name (0.5.20190701) unf (>= 0.0.5, < 1.0.0) dotenv (2.7.5) - ebnf (1.1.3) - rdf (~> 3.0) - sxp (~> 1.0) + ebnf (1.2.0) + rdf (~> 3.1) + sxp (~> 1.1) edtf (3.0.5) activesupport (>= 3.0, < 7.0) equivalent-xml (0.6.0) nokogiri (>= 1.4.3) erubis (2.7.0) - excon (0.68.0) + excon (0.71.1) ezid-client (1.8.0) hashie (~> 3.4, >= 3.4.3) nokogiri @@ -190,13 +190,13 @@ GEM factory_bot_rails (5.1.1) factory_bot (~> 5.1.0) railties (>= 4.2.0) - faraday (0.17.0) + faraday (0.17.3) multipart-post (>= 1.2, < 3) faraday-encoding (0.0.5) faraday faraday_middleware (0.12.2) faraday (>= 0.7.4, < 1.0) - ffi (1.11.2) + ffi (1.11.3) ffi-compiler (1.0.1) ffi (>= 1.0.0) rake @@ -215,18 +215,18 @@ GEM hashdiff (1.0.0) hashie (3.6.0) htmlentities (4.3.4) - http (4.2.0) + http (4.3.0) addressable (~> 2.3) http-cookie (~> 1.0) - http-form_data (~> 2.0) + http-form_data (~> 2.2) http-parser (~> 1.2.0) http-accept (1.7.0) http-cookie (1.0.3) domain_name (~> 0.5) - http-form_data (2.1.1) + http-form_data (2.2.0) http-parser (1.2.1) ffi-compiler (>= 1.0, < 2.0) - httparty (0.17.1) + httparty (0.17.3) mime-types (~> 3.0) multi_xml (>= 0.5.2) httpclient (2.8.3) @@ -247,7 +247,7 @@ GEM turbolinks jquery-ui-rails (6.0.1) railties (>= 3.2.16) - json (2.2.0) + json (2.3.0) json-ld (2.2.1) multi_json (~> 1.12) rdf (>= 2.2.8, < 4.0) @@ -269,7 +269,7 @@ GEM kaminari-core (1.1.1) latex-decode (0.3.1) link_header (0.0.8) - loofah (2.3.1) + loofah (2.4.0) crass (~> 1.0.2) nokogiri (>= 1.5.9) mail (2.7.1) @@ -285,7 +285,7 @@ GEM multi_json (~> 1.12) nokogiri (~> 1.8.1) oj (>= 2.8.3) - mime-types (3.3) + mime-types (3.3.1) mime-types-data (~> 3.2015) mime-types-data (3.2019.1009) mini_mime (1.0.2) @@ -325,8 +325,8 @@ GEM omniauth (>= 1.0.0) orm_adapter (0.5.0) pandoc-ruby (2.0.2) - parallel (1.19.0) - parser (2.6.5.0) + parallel (1.19.1) + parser (2.7.0.2) ast (~> 2.4.0) posix-spawn (0.3.13) postrank-uri (1.0.24) @@ -335,7 +335,7 @@ GEM public_suffix (>= 2.0.0, < 2.1) powerpack (0.1.2) public_suffix (2.0.5) - rack (1.6.11) + rack (1.6.12) rack-test (0.6.3) rack (>= 1.0) rails (4.2.11.1) @@ -365,19 +365,19 @@ GEM rainbow (3.0.0) rake (13.0.1) rb-fsevent (0.10.3) - rb-inotify (0.10.0) + rb-inotify (0.10.1) ffi (~> 1.0) - rdf (3.0.13) + rdf (3.1.1) hamster (~> 3.0) link_header (~> 0.0, >= 0.0.8) - rdf-aggregate-repo (2.2.1) - rdf (>= 2.2, < 4.0) - rdf-rdfa (3.0.1) - haml (~> 5.0) + rdf-aggregate-repo (3.1.0) + rdf (~> 3.1) + rdf-rdfa (3.1.0) + haml (~> 5.1) htmlentities (~> 4.3) - rdf (~> 3.0) - rdf-aggregate-repo (>= 2.2, < 4.0) - rdf-xsd (~> 3.0) + rdf (~> 3.1) + rdf-aggregate-repo (~> 3.1) + rdf-xsd (~> 3.1) rdf-rdfxml (2.2.1) htmlentities (~> 4.3) rdf (>= 2.2, < 4.0) @@ -386,8 +386,8 @@ GEM rdf-turtle (2.2.2) ebnf (~> 1.1) rdf (>= 2.2, < 4.0) - rdf-xsd (3.0.1) - rdf (~> 3.0) + rdf-xsd (3.1.0) + rdf (~> 3.1) redcarpet (3.5.0) rest-client (2.1.0) http-accept (>= 1.7.0, < 2.0) @@ -402,12 +402,12 @@ GEM rspec-core (~> 3.9.0) rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) - rspec-core (3.9.0) - rspec-support (~> 3.9.0) + rspec-core (3.9.1) + rspec-support (~> 3.9.1) rspec-expectations (3.9.0) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) - rspec-mocks (3.9.0) + rspec-mocks (3.9.1) diff-lcs (>= 1.2.0, < 2.0) rspec-support (~> 3.9.0) rspec-rails (3.9.0) @@ -418,7 +418,7 @@ GEM rspec-expectations (~> 3.9.0) rspec-mocks (~> 3.9.0) rspec-support (~> 3.9.0) - rspec-support (3.9.0) + rspec-support (3.9.2) rubocop (0.57.2) jaro_winkler (~> 1.5.1) parallel (~> 1.10) @@ -440,7 +440,7 @@ GEM ffi (~> 1.9) scss_lint (0.59.0) sass (~> 3.5, >= 3.5.5) - selenium-webdriver (3.142.6) + selenium-webdriver (3.142.7) childprocess (>= 0.5, < 4.0) rubyzip (>= 1.2.2) simplecov (0.17.1) @@ -465,8 +465,8 @@ GEM stripe (4.16.0) faraday (~> 0.13) net-http-persistent (~> 3.0) - sxp (1.0.2) - rdf (~> 3.0) + sxp (1.1.0) + rdf (~> 3.1) temple (0.8.2) terminal-table (1.8.0) unicode-display_width (~> 1.1, >= 1.1.1) @@ -475,19 +475,19 @@ GEM thor (0.20.3) thread_safe (0.3.6) tilt (2.0.10) - trollop (2.9.9) + trollop (2.9.10) turbolinks (5.2.1) turbolinks-source (~> 5.2) turbolinks-source (5.2.0) typesafe_enum (0.1.9) - tzinfo (1.2.5) + tzinfo (1.2.6) thread_safe (~> 0.1) unf (0.1.4) unf_ext unf_ext (0.0.7.6) unicode-display_width (1.6.0) unicode_utils (1.4.0) - webdrivers (4.1.3) + webdrivers (4.2.0) nokogiri (~> 1.6) rubyzip (>= 1.3.0) selenium-webdriver (>= 3.0, < 4.0) diff --git a/stash/stash_engine/stash_engine.gemspec b/stash/stash_engine/stash_engine.gemspec index 1b20068d57..185b6cce11 100644 --- a/stash/stash_engine/stash_engine.gemspec +++ b/stash/stash_engine/stash_engine.gemspec @@ -73,7 +73,6 @@ Gem::Specification.new do |s| # rubocop:disable Metrics/BlockLength s.add_dependency 'wkhtmltopdf-binary', '~> 0.12.3.1' s.add_dependency 'zaru', '~> 0.3' - s.add_development_dependency 'byebug' s.add_development_dependency 'colorize', '>= 0.8' s.add_development_dependency 'database_cleaner', '>= 1.5' s.add_development_dependency 'diffy', '>= 3.1' @@ -82,10 +81,7 @@ Gem::Specification.new do |s| # rubocop:disable Metrics/BlockLength s.add_development_dependency 'nokogiri', '>= 1.8' s.add_development_dependency 'rspec', '>= 3.5' s.add_development_dependency 'rspec-rails', '>= 3.5' - s.add_development_dependency 'rubocop', '0.57.2' - s.add_development_dependency 'scss_lint' s.add_development_dependency 'simplecov', '>= 0.14' s.add_development_dependency 'simplecov-console', '>= 0.4' - s.add_development_dependency 'webdrivers' # used to be chromedriver-helper, now deprecated s.add_development_dependency 'webmock', '>= 3.0' end