Dockerfile.base

FROM ubuntu:18.04

MAINTAINER Dave Tang <me@davetang.org>

RUN apt-get clean all && \
   apt-get update && \
   apt-get upgrade -y && \
   apt-get install -y \
      build-essential \
      git-core \
      wget \
      unzip \
      time \
      vim \
      libhdf5-dev \
      libcurl4-gnutls-dev \
      libssl-dev \
      libxml2-dev \
      libpng-dev \
      zlib1g-dev \
      libbz2-dev \
      liblzma-dev \
      libncurses-dev \
   && apt-get clean all && \
   apt-get purge && \
   rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

# Miniconda and dependencies
RUN cd /tmp/ && \
        wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh && \
        bash Miniconda3-latest-Linux-x86_64.sh -b -p $HOME/miniconda3 && \
        /root/miniconda3/condabin/conda install -y python=3.7
ENV PATH=$PATH:/root/miniconda3/bin

# CMake
RUN cd /tmp/ && \
   wget https://github.com/Kitware/CMake/releases/download/v3.16.5/cmake-3.16.5.tar.gz && \
   tar -zxf cmake-3.16.5.tar.gz && \
   cd cmake-3.16.5 && \
   ./bootstrap && \
   make && \
   make install

RUN rm -rf /tmp/*