.gitmodules

[submodule "submodules/GATK_GermlineCaller"]
	path = submodules/GATK_GermlineCaller
	url = https://github.com/ding-lab/GATK_GermlineCaller.git
[submodule "submodules/Varscan_GermlineCaller"]
	path = submodules/Varscan_GermlineCaller
	url = https://github.com/ding-lab/Varscan_GermlineCaller.git
[submodule "submodules/Pindel_GermlineCaller"]
	path = submodules/Pindel_GermlineCaller
	url = https://github.com/ding-lab/Pindel_GermlineCaller.git
[submodule "submodules/varscan_vcf_remap"]
	path = submodules/varscan_vcf_remap
	url = https://github.com/ding-lab/varscan_vcf_remap.git
[submodule "submodules/MergeFilterVCF"]
	path = submodules/MergeFilterVCF
	url = https://github.com/ding-lab/MergeFilterVCF.git
[submodule "submodules/HotspotFilter"]
	path = submodules/HotspotFilter
	url = https://github.com/ding-lab/HotspotFilter.git
[submodule "submodules/vcf2maf-CWL"]
	path = submodules/vcf2maf-CWL
	url = https://github.com/ding-lab/vcf2maf-CWL.git
[submodule "submodules/VLD_FilterVCF"]
	path = submodules/VLD_FilterVCF
	url = https://github.com/ding-lab/VLD_FilterVCF.git
[submodule "submodules/VEP_annotate"]
	path = submodules/VEP_annotate
	url = https://github.com/ding-lab/VEP_annotate.git
[submodule "submodules/WUDocker"]
	path = submodules/WUDocker
	url = https://github.com/ding-lab/WUDocker.git
[submodule "submodules/bcftools"]
	path = submodules/bcftools
	url = https://github.com/mwyczalkowski/bcftools.git